RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
LAPTM4B-201ENST00000445593 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
LAPTM4B-201ENST00000445593 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
LAPTM4B-201ENST00000445593 MTHFSP49914 203 aa22.17■■□□□ 1.14
LAPTM4B-201ENST00000445593 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
LAPTM4B-201ENST00000445593 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
LAPTM4B-201ENST00000445593 PREX1Q8TCU6 1659 aa22.16■■□□□ 1.14
LAPTM4B-201ENST00000445593 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
LAPTM4B-201ENST00000445593 C20orf194Q5TEA3 1177 aa22.15■■□□□ 1.14
LAPTM4B-201ENST00000445593 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
LAPTM4B-201ENST00000445593 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
LAPTM4B-201ENST00000445593 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
LAPTM4B-201ENST00000445593 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
LAPTM4B-201ENST00000445593 CRBNQ96SW2 442 aa22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 CLTCQ00610 1675 aaKnown RBP22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 SKAP1Q86WV1 359 aa22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 CEBPAP49715 358 aaPredicted RBP22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 ZMYM4Q5VZL5 1548 aa22.11■■□□□ 1.13
LAPTM4B-201ENST00000445593 FBLN1P23142 703 aa22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 CDK19Q9BWU1 502 aa22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 MYO3AQ8NEV4 1616 aa22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 TMEM131LA2VDJ0 1609 aa22.1■■□□□ 1.13
LAPTM4B-201ENST00000445593 CABP1Q9NZU7 370 aa22.09■■□□□ 1.13
LAPTM4B-201ENST00000445593 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
LAPTM4B-201ENST00000445593 A0A1W2PP64 1363 aa22.08■■□□□ 1.13
LAPTM4B-201ENST00000445593 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.12
LAPTM4B-201ENST00000445593 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
LAPTM4B-201ENST00000445593 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
LAPTM4B-201ENST00000445593 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
LAPTM4B-201ENST00000445593 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
LAPTM4B-201ENST00000445593 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
LAPTM4B-201ENST00000445593 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
LAPTM4B-201ENST00000445593 ANKRD36BQ8N2N9 1353 aa22.05■■□□□ 1.12
LAPTM4B-201ENST00000445593 RIMS2Q9UQ26 1411 aa22.05■■□□□ 1.12
LAPTM4B-201ENST00000445593 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
LAPTM4B-201ENST00000445593 SLFN5Q08AF3 891 aa22.04■■□□□ 1.12
LAPTM4B-201ENST00000445593 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
LAPTM4B-201ENST00000445593 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
LAPTM4B-201ENST00000445593 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
LAPTM4B-201ENST00000445593 BCAR3O75815 825 aa22.03■■□□□ 1.12
LAPTM4B-201ENST00000445593 TCP11L2Q8N4U5 519 aa22.02■■□□□ 1.12
LAPTM4B-201ENST00000445593 A2ML1A8K2U0 1454 aa22.01■■□□□ 1.11
LAPTM4B-201ENST00000445593 PTPRMP28827 1452 aa22.01■■□□□ 1.11
LAPTM4B-201ENST00000445593 TERF2IPQ9NYB0 399 aa22.01■■□□□ 1.11
LAPTM4B-201ENST00000445593 ZFYVE9O95405 1425 aa22■■□□□ 1.11
LAPTM4B-201ENST00000445593 ALKQ9UM73 1620 aa22■■□□□ 1.11
LAPTM4B-201ENST00000445593 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
LAPTM4B-201ENST00000445593 FYB1O15117 783 aa21.99■■□□□ 1.11
LAPTM4B-201ENST00000445593 HDGFL2Q7Z4V5 671 aaPredicted RBP21.99■■□□□ 1.11
LAPTM4B-201ENST00000445593 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
LAPTM4B-201ENST00000445593 KIF13AQ9H1H9 1805 aa21.98■■□□□ 1.11
LAPTM4B-201ENST00000445593 BCL2L13Q9BXK5 485 aa21.98■■□□□ 1.11
LAPTM4B-201ENST00000445593 INSRP06213 1382 aa21.98■■□□□ 1.11
LAPTM4B-201ENST00000445593 METP08581 1390 aa21.97■■□□□ 1.11
LAPTM4B-201ENST00000445593 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
LAPTM4B-201ENST00000445593 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
LAPTM4B-201ENST00000445593 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 SLC26A8Q96RN1 970 aa21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 AGLP35573 1532 aa21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 MSH5O43196 834 aa21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
LAPTM4B-201ENST00000445593 E9PSI1 815 aa21.94■■□□□ 1.1
LAPTM4B-201ENST00000445593 ZRANB1Q9UGI0 708 aa21.94■■□□□ 1.1
LAPTM4B-201ENST00000445593 ARHGEF40Q8TER5 1519 aa21.93■■□□□ 1.1
LAPTM4B-201ENST00000445593 TNRQ92752 1358 aa21.92■■□□□ 1.1
LAPTM4B-201ENST00000445593 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
LAPTM4B-201ENST00000445593 NPM2Q86SE8 214 aaKnown RBP21.91■■□□□ 1.1
LAPTM4B-201ENST00000445593 SOX12O15370 315 aa21.89■■□□□ 1.09
LAPTM4B-201ENST00000445593 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.09
LAPTM4B-201ENST00000445593 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
LAPTM4B-201ENST00000445593 NME9Q86XW9 330 aa21.89■■□□□ 1.09
LAPTM4B-201ENST00000445593 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.88■■□□□ 1.09
LAPTM4B-201ENST00000445593 LTKP29376 864 aa21.88■■□□□ 1.09
LAPTM4B-201ENST00000445593 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
LAPTM4B-201ENST00000445593 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
LAPTM4B-201ENST00000445593 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
LAPTM4B-201ENST00000445593 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
LAPTM4B-201ENST00000445593 CD163L1Q9NR16 1453 aa21.87■■□□□ 1.09
LAPTM4B-201ENST00000445593 TRMT2AQ8IZ69 625 aaKnown RBP21.86■■□□□ 1.09
LAPTM4B-201ENST00000445593 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
LAPTM4B-201ENST00000445593 REREQ9P2R6 1566 aa21.86■■□□□ 1.09
LAPTM4B-201ENST00000445593 HMOX1P09601 288 aa21.85■■□□□ 1.09
LAPTM4B-201ENST00000445593 CLUAP1Q96AJ1 413 aa21.85■■□□□ 1.09
LAPTM4B-201ENST00000445593 NUDT16Q96DE0 195 aaKnown RBP21.85■■□□□ 1.09
LAPTM4B-201ENST00000445593 TNNQ9UQP3 1299 aa21.85■■□□□ 1.09
LAPTM4B-201ENST00000445593 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
LAPTM4B-201ENST00000445593 EMILIN1Q9Y6C2 1016 aa21.84■■□□□ 1.09
LAPTM4B-201ENST00000445593 NSD2O96028 1365 aa21.84■■□□□ 1.09
LAPTM4B-201ENST00000445593 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
LAPTM4B-201ENST00000445593 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.83■■□□□ 1.09
LAPTM4B-201ENST00000445593 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
LAPTM4B-201ENST00000445593 DIAPH1O60610 1272 aaKnown RBP21.83■■□□□ 1.08
LAPTM4B-201ENST00000445593 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
LAPTM4B-201ENST00000445593 RRS1Q15050 365 aaKnown RBP21.82■■□□□ 1.08
LAPTM4B-201ENST00000445593 NINLQ9Y2I6 1382 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms