RNA–Protein interactions for RNA: ENST00000445470.6

CPA4-202, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 2,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-202ENST00000445470 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
CPA4-202ENST00000445470 ATF3P18847 181 aa12.11□□□□□ -0.47
CPA4-202ENST00000445470 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
CPA4-202ENST00000445470 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
CPA4-202ENST00000445470 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
CPA4-202ENST00000445470 ASXL1Q8IXJ9 1541 aa12.1□□□□□ -0.47
CPA4-202ENST00000445470 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
CPA4-202ENST00000445470 NUP155O75694 1391 aa12.09□□□□□ -0.47
CPA4-202ENST00000445470 C14orf37Q86TY3 774 aa12.09□□□□□ -0.47
CPA4-202ENST00000445470 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
CPA4-202ENST00000445470 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
CPA4-202ENST00000445470 LAMC1P11047 1609 aa12.08□□□□□ -0.48
CPA4-202ENST00000445470 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
CPA4-202ENST00000445470 MST1RQ04912 1400 aa12.07□□□□□ -0.48
CPA4-202ENST00000445470 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
CPA4-202ENST00000445470 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
CPA4-202ENST00000445470 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
CPA4-202ENST00000445470 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
CPA4-202ENST00000445470 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
CPA4-202ENST00000445470 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
CPA4-202ENST00000445470 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
CPA4-202ENST00000445470 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
CPA4-202ENST00000445470 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPA4-202ENST00000445470 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 RXRBP28702 533 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 NUTM2DQ5VT03 806 aaPredicted RBP12.03□□□□□ -0.48
CPA4-202ENST00000445470 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
CPA4-202ENST00000445470 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.48
CPA4-202ENST00000445470 KIF1BO60333 1816 aa12.02□□□□□ -0.48
CPA4-202ENST00000445470 METP08581 1390 aa12.02□□□□□ -0.48
CPA4-202ENST00000445470 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
CPA4-202ENST00000445470 TONSLQ96HA7 1378 aa12□□□□□ -0.49
CPA4-202ENST00000445470 AFF2P51816 1311 aa11.99□□□□□ -0.49
CPA4-202ENST00000445470 C1orf167Q5SNV9 1468 aa11.99□□□□□ -0.49
CPA4-202ENST00000445470 COL22A1Q8NFW1 1626 aaPredicted RBP11.99□□□□□ -0.49
CPA4-202ENST00000445470 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
CPA4-202ENST00000445470 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
CPA4-202ENST00000445470 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
CPA4-202ENST00000445470 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
CPA4-202ENST00000445470 NEFMP07197 916 aa11.96□□□□□ -0.49
CPA4-202ENST00000445470 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
CPA4-202ENST00000445470 RGS12O14924 1447 aa11.96□□□□□ -0.49
CPA4-202ENST00000445470 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
CPA4-202ENST00000445470 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
CPA4-202ENST00000445470 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
CPA4-202ENST00000445470 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.5
CPA4-202ENST00000445470 NAIPQ13075 1403 aa11.96□□□□□ -0.5
CPA4-202ENST00000445470 PPLO60437 1756 aa11.95□□□□□ -0.5
CPA4-202ENST00000445470 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
CPA4-202ENST00000445470 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
CPA4-202ENST00000445470 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
CPA4-202ENST00000445470 CDC42BPGQ6DT37 1551 aa11.95□□□□□ -0.5
CPA4-202ENST00000445470 HSPA5P11021 654 aaKnown RBP11.95□□□□□ -0.5
CPA4-202ENST00000445470 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
CPA4-202ENST00000445470 BRPF3Q9ULD4 1205 aa11.95□□□□□ -0.5
CPA4-202ENST00000445470 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
CPA4-202ENST00000445470 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
CPA4-202ENST00000445470 ROBO2Q9HCK4 1378 aa11.93□□□□□ -0.5
CPA4-202ENST00000445470 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
CPA4-202ENST00000445470 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
CPA4-202ENST00000445470 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
CPA4-202ENST00000445470 C8orf37Q96NL8 207 aa11.92□□□□□ -0.5
CPA4-202ENST00000445470 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
CPA4-202ENST00000445470 ATRNO75882 1429 aa11.91□□□□□ -0.5
CPA4-202ENST00000445470 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
CPA4-202ENST00000445470 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
CPA4-202ENST00000445470 KNDC1Q76NI1 1749 aa11.9□□□□□ -0.5
CPA4-202ENST00000445470 FNBP4Q8N3X1 1017 aaPredicted RBP11.9□□□□□ -0.5
CPA4-202ENST00000445470 MYOM2P54296 1465 aa11.9□□□□□ -0.5
CPA4-202ENST00000445470 TECPR2O15040 1411 aa11.9□□□□□ -0.5
CPA4-202ENST00000445470 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
CPA4-202ENST00000445470 PXDNQ92626 1479 aa11.89□□□□□ -0.51
CPA4-202ENST00000445470 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
CPA4-202ENST00000445470 FOXD1Q16676 465 aa11.88□□□□□ -0.51
CPA4-202ENST00000445470 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
CPA4-202ENST00000445470 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
CPA4-202ENST00000445470 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
CPA4-202ENST00000445470 LRPPRCP42704 1394 aaKnown RBP11.88□□□□□ -0.51
CPA4-202ENST00000445470 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
CPA4-202ENST00000445470 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
CPA4-202ENST00000445470 ORAI2Q96SN7 254 aa11.87□□□□□ -0.51
CPA4-202ENST00000445470 USP21Q9UK80 565 aa11.87□□□□□ -0.51
CPA4-202ENST00000445470 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
CPA4-202ENST00000445470 CCDC125Q86Z20 511 aa11.86□□□□□ -0.51
CPA4-202ENST00000445470 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
CPA4-202ENST00000445470 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
CPA4-202ENST00000445470 FMN2Q9NZ56 1722 aa11.85□□□□□ -0.51
CPA4-202ENST00000445470 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
CPA4-202ENST00000445470 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
CPA4-202ENST00000445470 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
CPA4-202ENST00000445470 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPA4-202ENST00000445470 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
CPA4-202ENST00000445470 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
CPA4-202ENST00000445470 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
CPA4-202ENST00000445470 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
CPA4-202ENST00000445470 PDE4AP27815 886 aa11.83□□□□□ -0.52
CPA4-202ENST00000445470 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms