RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 MLH3Q9UHC1 1453 aa28.09■■■□□ 2.09
SKIDA1-201ENST00000444772 RUNDC1Q96C34 613 aa28.08■■■□□ 2.09
SKIDA1-201ENST00000444772 NCBP3Q53F19 620 aaKnown RBP28.07■■■□□ 2.08
SKIDA1-201ENST00000444772 POGZQ7Z3K3 1410 aa28.06■■■□□ 2.08
SKIDA1-201ENST00000444772 DMRT2Q9Y5R5 561 aa28.06■■■□□ 2.08
SKIDA1-201ENST00000444772 TRAK1Q9UPV9 953 aa28.05■■■□□ 2.08
SKIDA1-201ENST00000444772 CHGAP10645 457 aaKnown RBP28.05■■■□□ 2.08
SKIDA1-201ENST00000444772 IQSEC2Q5JU85 1478 aa28.04■■■□□ 2.08
SKIDA1-201ENST00000444772 WDR63Q8IWG1 891 aa28.04■■■□□ 2.08
SKIDA1-201ENST00000444772 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
SKIDA1-201ENST00000444772 HECW2Q9P2P5 1572 aa28.04■■■□□ 2.08
SKIDA1-201ENST00000444772 FRMPD1Q5SYB0 1578 aa28.03■■■□□ 2.08
SKIDA1-201ENST00000444772 RGS3P49796 1198 aa28.03■■■□□ 2.08
SKIDA1-201ENST00000444772 NPM1P06748 294 aaKnown RBP eCLIP28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 CLUAP1Q96AJ1 413 aa28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 NSD2O96028 1365 aa28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 MAPK8IP3Q9UPT6 1336 aa28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 CCDC27Q2M243 656 aa28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 CFAP53Q96M91 514 aa28.02■■■□□ 2.08
SKIDA1-201ENST00000444772 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
SKIDA1-201ENST00000444772 SLC12A5Q9H2X9 1139 aa28.01■■■□□ 2.07
SKIDA1-201ENST00000444772 ABCC3O15438 1527 aa27.99■■■□□ 2.07
SKIDA1-201ENST00000444772 VIRMAQ69YN4 1812 aaKnown RBP27.98■■■□□ 2.07
SKIDA1-201ENST00000444772 TCP11L2Q8N4U5 519 aa27.97■■■□□ 2.07
SKIDA1-201ENST00000444772 CD109Q6YHK3 1445 aa27.97■■■□□ 2.07
SKIDA1-201ENST00000444772 IGHDP01880 384 aa27.97■■■□□ 2.07
SKIDA1-201ENST00000444772 EVC2Q86UK5 1308 aa27.96■■■□□ 2.07
SKIDA1-201ENST00000444772 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
SKIDA1-201ENST00000444772 GLI2P10070 1586 aa27.95■■■□□ 2.07
SKIDA1-201ENST00000444772 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
SKIDA1-201ENST00000444772 RARSP54136 660 aaKnown RBP27.95■■■□□ 2.06
SKIDA1-201ENST00000444772 GGT6Q6P531 493 aa27.95■■■□□ 2.06
SKIDA1-201ENST00000444772 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
SKIDA1-201ENST00000444772 VGFO15240 615 aaPredicted RBP27.94■■■□□ 2.06
SKIDA1-201ENST00000444772 PMFBP1Q8TBY8 1022 aa27.94■■■□□ 2.06
SKIDA1-201ENST00000444772 MTHFSP49914 203 aa27.93■■■□□ 2.06
SKIDA1-201ENST00000444772 PIK3C2BO00750 1634 aa27.93■■■□□ 2.06
SKIDA1-201ENST00000444772 COG6Q9Y2V7 657 aa27.93■■■□□ 2.06
SKIDA1-201ENST00000444772 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
SKIDA1-201ENST00000444772 NFKBIBQ15653 356 aa27.92■■■□□ 2.06
SKIDA1-201ENST00000444772 TMEM132EQ6IEE7 984 aa27.92■■■□□ 2.06
SKIDA1-201ENST00000444772 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
SKIDA1-201ENST00000444772 TNNT2P45379 298 aaPredicted RBP27.91■■■□□ 2.06
SKIDA1-201ENST00000444772 ARHGEF28Q8N1W1 1705 aaKnown RBP27.91■■■□□ 2.06
SKIDA1-201ENST00000444772 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
SKIDA1-201ENST00000444772 MYH16Q9H6N6 1097 aa27.9■■■□□ 2.06
SKIDA1-201ENST00000444772 NEUROD2Q15784 382 aa27.88■■■□□ 2.05
SKIDA1-201ENST00000444772 TULP4Q9NRJ4 1543 aa27.88■■■□□ 2.05
SKIDA1-201ENST00000444772 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
SKIDA1-201ENST00000444772 FRAT1Q92837 279 aaPredicted RBP27.87■■■□□ 2.05
SKIDA1-201ENST00000444772 SLC4A3P48751 1232 aa27.87■■■□□ 2.05
SKIDA1-201ENST00000444772 RRP7AQ9Y3A4 280 aaKnown RBP27.87■■■□□ 2.05
SKIDA1-201ENST00000444772 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 ARHGAP31Q2M1Z3 1444 aa27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 CT47B1P0C2W7 299 aaPredicted RBP27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 ZFYVE9O95405 1425 aa27.86■■■□□ 2.05
SKIDA1-201ENST00000444772 ADGRB2O60241 1585 aa27.85■■■□□ 2.05
SKIDA1-201ENST00000444772 NEO1Q92859 1461 aa27.84■■■□□ 2.05
SKIDA1-201ENST00000444772 SIGLEC1Q9BZZ2 1709 aa27.83■■■□□ 2.05
SKIDA1-201ENST00000444772 GSE1Q14687 1217 aa27.83■■■□□ 2.05
SKIDA1-201ENST00000444772 USP19O94966 1318 aa27.81■■■□□ 2.04
SKIDA1-201ENST00000444772 ABCC11Q96J66 1382 aa27.8■■■□□ 2.04
SKIDA1-201ENST00000444772 U2AF1L5P0DN76 240 aaPredicted RBP27.79■■■□□ 2.04
SKIDA1-201ENST00000444772 U2AF1Q01081 240 aaKnown RBP eCLIP27.79■■■□□ 2.04
SKIDA1-201ENST00000444772 RWDD1Q9H446 243 aaPredicted RBP27.79■■■□□ 2.04
SKIDA1-201ENST00000444772 SLC52A1Q9NWF4 448 aa27.77■■■□□ 2.04
SKIDA1-201ENST00000444772 RLBP1P12271 317 aa27.76■■■□□ 2.04
SKIDA1-201ENST00000444772 BECN1Q14457 450 aa27.76■■■□□ 2.04
SKIDA1-201ENST00000444772 PCDHB15Q9Y5E8 787 aa27.76■■■□□ 2.03
SKIDA1-201ENST00000444772 DIP2CQ9Y2E4 1556 aa27.75■■■□□ 2.03
SKIDA1-201ENST00000444772 MED14O60244 1454 aa27.74■■■□□ 2.03
SKIDA1-201ENST00000444772 ZKSCAN2Q63HK3 967 aa27.74■■■□□ 2.03
SKIDA1-201ENST00000444772 CABP2Q9NPB3 220 aa27.74■■■□□ 2.03
SKIDA1-201ENST00000444772 ATAD2Q6PL18 1390 aa27.73■■■□□ 2.03
SKIDA1-201ENST00000444772 MVPQ14764 893 aaKnown RBP27.73■■■□□ 2.03
SKIDA1-201ENST00000444772 UPF2Q9HAU5 1272 aaKnown RBP27.73■■■□□ 2.03
SKIDA1-201ENST00000444772 A0A1W2PP64 1363 aa27.72■■■□□ 2.03
SKIDA1-201ENST00000444772 NLRP1Q9C000 1473 aa27.71■■■□□ 2.03
SKIDA1-201ENST00000444772 IL16Q14005 1332 aa27.7■■■□□ 2.02
SKIDA1-201ENST00000444772 IDI1Q13907 227 aa27.7■■■□□ 2.02
SKIDA1-201ENST00000444772 PDZRN3Q9UPQ7 1066 aa27.7■■■□□ 2.02
SKIDA1-201ENST00000444772 BCL2L13Q9BXK5 485 aa27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 TERF2IPQ9NYB0 399 aa27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 ANKRD26Q9UPS8 1709 aa27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 DZIP1LQ8IYY4 767 aaKnown RBP27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 PLEKHF1Q96S99 279 aa27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 COL3A1P02461 1466 aaPredicted RBP27.69■■■□□ 2.02
SKIDA1-201ENST00000444772 SEC24BO95487 1268 aa27.68■■■□□ 2.02
SKIDA1-201ENST00000444772 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
SKIDA1-201ENST00000444772 FTSJ3Q8IY81 847 aaKnown RBP27.67■■■□□ 2.02
SKIDA1-201ENST00000444772 CLTCQ00610 1675 aaKnown RBP27.67■■■□□ 2.02
SKIDA1-201ENST00000444772 SRPK2P78362 688 aaKnown RBP27.66■■■□□ 2.02
SKIDA1-201ENST00000444772 PNNQ9H307 717 aaKnown RBP27.66■■■□□ 2.02
SKIDA1-201ENST00000444772 TNNQ9UQP3 1299 aa27.66■■■□□ 2.02
SKIDA1-201ENST00000444772 RAPGEF3O95398 923 aa27.65■■■□□ 2.02
SKIDA1-201ENST00000444772 TMPOP42166 694 aaKnown RBP27.65■■■□□ 2.02
SKIDA1-201ENST00000444772 PTPRMP28827 1452 aa27.65■■■□□ 2.02
SKIDA1-201ENST00000444772 FRAT2O75474 233 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms