RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 SAFB2Q14151 953 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00299-203ENST00000444688 TESK2Q96S53 571 aa18.48■□□□□ 0.55
LINC00299-203ENST00000444688 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
LINC00299-203ENST00000444688 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
LINC00299-203ENST00000444688 MINK1Q8N4C8 1332 aaPredicted RBP18.46■□□□□ 0.55
LINC00299-203ENST00000444688 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.45■□□□□ 0.54
LINC00299-203ENST00000444688 TMF1P82094 1093 aa18.44■□□□□ 0.54
LINC00299-203ENST00000444688 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
LINC00299-203ENST00000444688 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
LINC00299-203ENST00000444688 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
LINC00299-203ENST00000444688 C19orf44Q9H6X5 657 aa18.43■□□□□ 0.54
LINC00299-203ENST00000444688 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
LINC00299-203ENST00000444688 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
LINC00299-203ENST00000444688 MSH6P52701 1360 aa18.42■□□□□ 0.54
LINC00299-203ENST00000444688 DCCP43146 1447 aa18.41■□□□□ 0.54
LINC00299-203ENST00000444688 NALCNQ8IZF0 1738 aa18.41■□□□□ 0.54
LINC00299-203ENST00000444688 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
LINC00299-203ENST00000444688 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
LINC00299-203ENST00000444688 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
LINC00299-203ENST00000444688 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
LINC00299-203ENST00000444688 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.53
LINC00299-203ENST00000444688 DISP3Q9P2K9 1392 aa18.39■□□□□ 0.53
LINC00299-203ENST00000444688 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
LINC00299-203ENST00000444688 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
LINC00299-203ENST00000444688 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
LINC00299-203ENST00000444688 ATF3P18847 181 aa18.36■□□□□ 0.53
LINC00299-203ENST00000444688 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
LINC00299-203ENST00000444688 ANKARQ7Z5J8 1434 aa18.35■□□□□ 0.53
LINC00299-203ENST00000444688 ATAD2Q6PL18 1390 aa18.34■□□□□ 0.53
LINC00299-203ENST00000444688 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
LINC00299-203ENST00000444688 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
LINC00299-203ENST00000444688 FMN2Q9NZ56 1722 aa18.34■□□□□ 0.53
LINC00299-203ENST00000444688 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
LINC00299-203ENST00000444688 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
LINC00299-203ENST00000444688 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
LINC00299-203ENST00000444688 CERKQ8TCT0 537 aa18.32■□□□□ 0.52
LINC00299-203ENST00000444688 ATP7BP35670 1465 aa18.32■□□□□ 0.52
LINC00299-203ENST00000444688 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
LINC00299-203ENST00000444688 MST1RQ04912 1400 aa18.31■□□□□ 0.52
LINC00299-203ENST00000444688 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
LINC00299-203ENST00000444688 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
LINC00299-203ENST00000444688 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
LINC00299-203ENST00000444688 C1orf167Q5SNV9 1468 aa18.29■□□□□ 0.52
LINC00299-203ENST00000444688 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
LINC00299-203ENST00000444688 NUTM2FA1L443 756 aa18.28■□□□□ 0.52
LINC00299-203ENST00000444688 USP32Q8NFA0 1604 aa18.27■□□□□ 0.52
LINC00299-203ENST00000444688 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
LINC00299-203ENST00000444688 SLAIN2Q9P270 581 aa18.26■□□□□ 0.51
LINC00299-203ENST00000444688 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
LINC00299-203ENST00000444688 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
LINC00299-203ENST00000444688 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
LINC00299-203ENST00000444688 TOM1O60784 492 aa18.25■□□□□ 0.51
LINC00299-203ENST00000444688 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
LINC00299-203ENST00000444688 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
LINC00299-203ENST00000444688 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
LINC00299-203ENST00000444688 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
LINC00299-203ENST00000444688 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
LINC00299-203ENST00000444688 PHF8Q9UPP1 1060 aa18.22■□□□□ 0.51
LINC00299-203ENST00000444688 MYOM1P52179 1685 aa18.22■□□□□ 0.51
LINC00299-203ENST00000444688 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
LINC00299-203ENST00000444688 KIF1AQ12756 1690 aa18.21■□□□□ 0.51
LINC00299-203ENST00000444688 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
LINC00299-203ENST00000444688 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
LINC00299-203ENST00000444688 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
LINC00299-203ENST00000444688 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
LINC00299-203ENST00000444688 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
LINC00299-203ENST00000444688 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
LINC00299-203ENST00000444688 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
LINC00299-203ENST00000444688 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
LINC00299-203ENST00000444688 CPSF1Q10570 1443 aaKnown RBP18.18■□□□□ 0.5
LINC00299-203ENST00000444688 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
LINC00299-203ENST00000444688 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
LINC00299-203ENST00000444688 ACEP12821 1306 aa18.18■□□□□ 0.5
LINC00299-203ENST00000444688 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
LINC00299-203ENST00000444688 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
LINC00299-203ENST00000444688 PANK3Q9H999 370 aa18.15■□□□□ 0.5
LINC00299-203ENST00000444688 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
LINC00299-203ENST00000444688 BRD4O60885 1362 aaPredicted RBP18.15■□□□□ 0.5
LINC00299-203ENST00000444688 FOXO3O43524 673 aa18.14■□□□□ 0.49
LINC00299-203ENST00000444688 KTN1Q86UP2 1357 aaKnown RBP18.14■□□□□ 0.49
LINC00299-203ENST00000444688 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
LINC00299-203ENST00000444688 USP6P35125 1406 aa18.13■□□□□ 0.49
LINC00299-203ENST00000444688 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
LINC00299-203ENST00000444688 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
LINC00299-203ENST00000444688 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
LINC00299-203ENST00000444688 PSME1Q06323 249 aa18.12■□□□□ 0.49
LINC00299-203ENST00000444688 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
LINC00299-203ENST00000444688 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
LINC00299-203ENST00000444688 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
LINC00299-203ENST00000444688 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
LINC00299-203ENST00000444688 KRT28Q7Z3Y7 464 aa18.1■□□□□ 0.49
LINC00299-203ENST00000444688 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
LINC00299-203ENST00000444688 NHSL1Q5SYE7 1610 aa18.09■□□□□ 0.49
LINC00299-203ENST00000444688 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
LINC00299-203ENST00000444688 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
LINC00299-203ENST00000444688 PXDNQ92626 1479 aa18.08■□□□□ 0.49
LINC00299-203ENST00000444688 SBNO1A3KN83 1393 aa18.08■□□□□ 0.49
LINC00299-203ENST00000444688 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
LINC00299-203ENST00000444688 TTC21AQ8NDW8 1320 aa18.08■□□□□ 0.49
LINC00299-203ENST00000444688 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms