RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 SHANK2Q9UPX8 1470 aa16.98■□□□□ 0.31
LINC00475-208ENST00000444476 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
LINC00475-208ENST00000444476 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
LINC00475-208ENST00000444476 TK2O00142 265 aa16.96■□□□□ 0.31
LINC00475-208ENST00000444476 DSG2Q14126 1118 aa16.96■□□□□ 0.31
LINC00475-208ENST00000444476 DHX29Q7Z478 1369 aaKnown RBP16.96■□□□□ 0.31
LINC00475-208ENST00000444476 HCSTQ9UBK5 93 aa16.95■□□□□ 0.3
LINC00475-208ENST00000444476 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
LINC00475-208ENST00000444476 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
LINC00475-208ENST00000444476 MLECQ14165 292 aa16.94■□□□□ 0.3
LINC00475-208ENST00000444476 CNTLNQ9NXG0 1405 aa16.94■□□□□ 0.3
LINC00475-208ENST00000444476 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
LINC00475-208ENST00000444476 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
LINC00475-208ENST00000444476 ABCC5O15440 1437 aa16.93■□□□□ 0.3
LINC00475-208ENST00000444476 DAPK1P53355 1430 aa16.93■□□□□ 0.3
LINC00475-208ENST00000444476 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
LINC00475-208ENST00000444476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC00475-208ENST00000444476 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
LINC00475-208ENST00000444476 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
LINC00475-208ENST00000444476 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
LINC00475-208ENST00000444476 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
LINC00475-208ENST00000444476 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
LINC00475-208ENST00000444476 STAC3Q96MF2 364 aa16.86■□□□□ 0.29
LINC00475-208ENST00000444476 KIF15Q9NS87 1388 aa16.86■□□□□ 0.29
LINC00475-208ENST00000444476 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
LINC00475-208ENST00000444476 KIF3BO15066 747 aa16.85■□□□□ 0.29
LINC00475-208ENST00000444476 PSEN2P49810 448 aa16.85■□□□□ 0.29
LINC00475-208ENST00000444476 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
LINC00475-208ENST00000444476 GGT6Q6P531 493 aa16.84■□□□□ 0.29
LINC00475-208ENST00000444476 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
LINC00475-208ENST00000444476 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
LINC00475-208ENST00000444476 DMRTA1Q5VZB9 504 aa16.83■□□□□ 0.28
LINC00475-208ENST00000444476 RNF17Q9BXT8 1623 aaKnown RBP16.82■□□□□ 0.28
LINC00475-208ENST00000444476 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
LINC00475-208ENST00000444476 HRO43593 1189 aa16.82■□□□□ 0.28
LINC00475-208ENST00000444476 PLA2G2EQ9NZK7 142 aa16.82■□□□□ 0.28
LINC00475-208ENST00000444476 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
LINC00475-208ENST00000444476 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
LINC00475-208ENST00000444476 OXER1Q8TDS5 423 aa16.81■□□□□ 0.28
LINC00475-208ENST00000444476 C3P01024 1663 aa16.81■□□□□ 0.28
LINC00475-208ENST00000444476 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
LINC00475-208ENST00000444476 ROCK1Q13464 1354 aa16.8■□□□□ 0.28
LINC00475-208ENST00000444476 NPATQ14207 1427 aa16.79■□□□□ 0.28
LINC00475-208ENST00000444476 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
LINC00475-208ENST00000444476 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
LINC00475-208ENST00000444476 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
LINC00475-208ENST00000444476 RRP7BPQ9NSQ0 103 aa16.79■□□□□ 0.28
LINC00475-208ENST00000444476 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
LINC00475-208ENST00000444476 PPP1R15BQ5SWA1 713 aa16.77■□□□□ 0.28
LINC00475-208ENST00000444476 KCNK17Q96T54 332 aa16.77■□□□□ 0.28
LINC00475-208ENST00000444476 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
LINC00475-208ENST00000444476 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
LINC00475-208ENST00000444476 PREX1Q8TCU6 1659 aa16.76■□□□□ 0.27
LINC00475-208ENST00000444476 PDE4AP27815 886 aa16.76■□□□□ 0.27
LINC00475-208ENST00000444476 UPF1Q92900 1129 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC00475-208ENST00000444476 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
LINC00475-208ENST00000444476 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
LINC00475-208ENST00000444476 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
LINC00475-208ENST00000444476 UHRF1BP1Q6BDS2 1440 aa16.74■□□□□ 0.27
LINC00475-208ENST00000444476 DEPDC5O75140 1603 aa16.74■□□□□ 0.27
LINC00475-208ENST00000444476 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
LINC00475-208ENST00000444476 KANK1Q14678 1352 aa16.73■□□□□ 0.27
LINC00475-208ENST00000444476 MROH1Q8NDA8 1641 aa16.73■□□□□ 0.27
LINC00475-208ENST00000444476 PZPP20742 1482 aa16.73■□□□□ 0.27
LINC00475-208ENST00000444476 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
LINC00475-208ENST00000444476 ABCC3O15438 1527 aa16.72■□□□□ 0.27
LINC00475-208ENST00000444476 ZNF454Q8N9F8 522 aa16.72■□□□□ 0.27
LINC00475-208ENST00000444476 KCTD12Q96CX2 325 aaKnown RBP16.7■□□□□ 0.26
LINC00475-208ENST00000444476 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
LINC00475-208ENST00000444476 LMTK2Q8IWU2 1503 aa16.67■□□□□ 0.26
LINC00475-208ENST00000444476 ITGAEP38570 1179 aa16.67■□□□□ 0.26
LINC00475-208ENST00000444476 SLC4A5Q9BY07 1137 aa16.67■□□□□ 0.26
LINC00475-208ENST00000444476 VPS9D1Q9Y2B5 631 aa16.67■□□□□ 0.26
LINC00475-208ENST00000444476 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
LINC00475-208ENST00000444476 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
LINC00475-208ENST00000444476 CAMSAP1Q5T5Y3 1602 aa16.66■□□□□ 0.26
LINC00475-208ENST00000444476 CEP152O94986 1710 aa16.65■□□□□ 0.26
LINC00475-208ENST00000444476 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 PTPREP23469 700 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 FOSBP53539 338 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
LINC00475-208ENST00000444476 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 UNC13BO14795 1591 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 TNRQ92752 1358 aa16.64■□□□□ 0.25
LINC00475-208ENST00000444476 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
LINC00475-208ENST00000444476 NLRP1Q9C000 1473 aa16.62■□□□□ 0.25
LINC00475-208ENST00000444476 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
LINC00475-208ENST00000444476 CEP170BQ9Y4F5 1589 aaPredicted RBP16.61■□□□□ 0.25
LINC00475-208ENST00000444476 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
LINC00475-208ENST00000444476 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
LINC00475-208ENST00000444476 RPRD2Q5VT52 1461 aaKnown RBP16.61■□□□□ 0.25
LINC00475-208ENST00000444476 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
LINC00475-208ENST00000444476 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
LINC00475-208ENST00000444476 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
LINC00475-208ENST00000444476 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
LINC00475-208ENST00000444476 HSPA2P54652 639 aa16.59■□□□□ 0.25
LINC00475-208ENST00000444476 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
LINC00475-208ENST00000444476 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
LINC00475-208ENST00000444476 EVI5O60447 810 aa16.58■□□□□ 0.24
LINC00475-208ENST00000444476 LARP6Q9BRS8 491 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms