RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 NEO1Q92859 1461 aa24.53■■□□□ 1.52
PMPCB-204ENST00000444457 SIGLEC1Q9BZZ2 1709 aa24.53■■□□□ 1.52
PMPCB-204ENST00000444457 FRAT2O75474 233 aaPredicted RBP24.52■■□□□ 1.52
PMPCB-204ENST00000444457 DUSP27Q5VZP5 1158 aa24.52■■□□□ 1.52
PMPCB-204ENST00000444457 C14orf93Q9H972 538 aaKnown RBP24.51■■□□□ 1.51
PMPCB-204ENST00000444457 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
PMPCB-204ENST00000444457 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
PMPCB-204ENST00000444457 C8orf34Q49A92 452 aa24.5■■□□□ 1.51
PMPCB-204ENST00000444457 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
PMPCB-204ENST00000444457 PIK3C2BO00750 1634 aa24.49■■□□□ 1.51
PMPCB-204ENST00000444457 DIP2CQ9Y2E4 1556 aa24.49■■□□□ 1.51
PMPCB-204ENST00000444457 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
PMPCB-204ENST00000444457 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
PMPCB-204ENST00000444457 CCDC146Q8IYE0 955 aa24.46■■□□□ 1.51
PMPCB-204ENST00000444457 RAPGEF3O95398 923 aa24.46■■□□□ 1.51
PMPCB-204ENST00000444457 RICTORQ6R327 1708 aa24.45■■□□□ 1.5
PMPCB-204ENST00000444457 SLFN5Q08AF3 891 aa24.44■■□□□ 1.5
PMPCB-204ENST00000444457 GLI2P10070 1586 aa24.44■■□□□ 1.5
PMPCB-204ENST00000444457 NSD3Q9BZ95 1437 aa24.43■■□□□ 1.5
PMPCB-204ENST00000444457 NEXMIFQ5QGS0 1516 aa24.43■■□□□ 1.5
PMPCB-204ENST00000444457 C20orf194Q5TEA3 1177 aa24.42■■□□□ 1.5
PMPCB-204ENST00000444457 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
PMPCB-204ENST00000444457 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
PMPCB-204ENST00000444457 ARHGEF28Q8N1W1 1705 aaKnown RBP24.41■■□□□ 1.5
PMPCB-204ENST00000444457 APAF1O14727 1248 aa24.41■■□□□ 1.5
PMPCB-204ENST00000444457 VIRMAQ69YN4 1812 aaKnown RBP24.41■■□□□ 1.5
PMPCB-204ENST00000444457 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
PMPCB-204ENST00000444457 USP32Q8NFA0 1604 aa24.4■■□□□ 1.5
PMPCB-204ENST00000444457 ARHGAP31Q2M1Z3 1444 aa24.39■■□□□ 1.5
PMPCB-204ENST00000444457 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
PMPCB-204ENST00000444457 SLC12A5Q9H2X9 1139 aa24.38■■□□□ 1.49
PMPCB-204ENST00000444457 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
PMPCB-204ENST00000444457 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
PMPCB-204ENST00000444457 VGFO15240 615 aaPredicted RBP24.35■■□□□ 1.49
PMPCB-204ENST00000444457 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
PMPCB-204ENST00000444457 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
PMPCB-204ENST00000444457 MORC1Q86VD1 984 aa24.34■■□□□ 1.49
PMPCB-204ENST00000444457 TULP4Q9NRJ4 1543 aa24.34■■□□□ 1.49
PMPCB-204ENST00000444457 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
PMPCB-204ENST00000444457 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
PMPCB-204ENST00000444457 E9PSI1 815 aa24.32■■□□□ 1.48
PMPCB-204ENST00000444457 RRAGDQ9NQL2 400 aaPredicted RBP24.32■■□□□ 1.48
PMPCB-204ENST00000444457 YEATS2Q9ULM3 1422 aa24.32■■□□□ 1.48
PMPCB-204ENST00000444457 MYO5BQ9ULV0 1848 aa24.32■■□□□ 1.48
PMPCB-204ENST00000444457 PKNOX2Q96KN3 472 aa24.31■■□□□ 1.48
PMPCB-204ENST00000444457 PUS7Q96PZ0 661 aaKnown RBP24.31■■□□□ 1.48
PMPCB-204ENST00000444457 EVC2Q86UK5 1308 aa24.3■■□□□ 1.48
PMPCB-204ENST00000444457 POGKQ9P215 609 aa24.3■■□□□ 1.48
PMPCB-204ENST00000444457 PREX1Q8TCU6 1659 aa24.29■■□□□ 1.48
PMPCB-204ENST00000444457 IDI1Q13907 227 aa24.29■■□□□ 1.48
PMPCB-204ENST00000444457 ZFYVE9O95405 1425 aa24.29■■□□□ 1.48
PMPCB-204ENST00000444457 CGNL1Q0VF96 1302 aa24.28■■□□□ 1.48
PMPCB-204ENST00000444457 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
PMPCB-204ENST00000444457 L1TD1Q5T7N2 865 aaKnown RBP24.28■■□□□ 1.48
PMPCB-204ENST00000444457 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
PMPCB-204ENST00000444457 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
PMPCB-204ENST00000444457 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
PMPCB-204ENST00000444457 GLIPR1L2Q4G1C9 344 aa24.27■■□□□ 1.48
PMPCB-204ENST00000444457 SLC52A1Q9NWF4 448 aa24.27■■□□□ 1.48
PMPCB-204ENST00000444457 TMEM131LA2VDJ0 1609 aa24.25■■□□□ 1.47
PMPCB-204ENST00000444457 IQSEC2Q5JU85 1478 aa24.24■■□□□ 1.47
PMPCB-204ENST00000444457 WWC1Q8IX03 1113 aa24.24■■□□□ 1.47
PMPCB-204ENST00000444457 USP19O94966 1318 aa24.24■■□□□ 1.47
PMPCB-204ENST00000444457 DIP2BQ9P265 1576 aa24.24■■□□□ 1.47
PMPCB-204ENST00000444457 NSD2O96028 1365 aa24.23■■□□□ 1.47
PMPCB-204ENST00000444457 RGS3P49796 1198 aa24.23■■□□□ 1.47
PMPCB-204ENST00000444457 BCAR3O75815 825 aa24.22■■□□□ 1.47
PMPCB-204ENST00000444457 RUNDC1Q96C34 613 aa24.22■■□□□ 1.47
PMPCB-204ENST00000444457 MTHFSP49914 203 aa24.21■■□□□ 1.47
PMPCB-204ENST00000444457 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
PMPCB-204ENST00000444457 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
PMPCB-204ENST00000444457 SAFB2Q14151 953 aaKnown RBP eCLIP24.17■■□□□ 1.46
PMPCB-204ENST00000444457 NINLQ9Y2I6 1382 aa24.17■■□□□ 1.46
PMPCB-204ENST00000444457 PTPRMP28827 1452 aa24.17■■□□□ 1.46
PMPCB-204ENST00000444457 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
PMPCB-204ENST00000444457 BECN1Q14457 450 aa24.16■■□□□ 1.46
PMPCB-204ENST00000444457 KIF13AQ9H1H9 1805 aa24.15■■□□□ 1.46
PMPCB-204ENST00000444457 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
PMPCB-204ENST00000444457 STK26Q9P289 416 aa24.15■■□□□ 1.46
PMPCB-204ENST00000444457 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
PMPCB-204ENST00000444457 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
PMPCB-204ENST00000444457 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
PMPCB-204ENST00000444457 NLRP1Q9C000 1473 aa24.14■■□□□ 1.46
PMPCB-204ENST00000444457 A0A1W2PP64 1363 aa24.14■■□□□ 1.46
PMPCB-204ENST00000444457 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.46
PMPCB-204ENST00000444457 ABCC11Q96J66 1382 aa24.14■■□□□ 1.45
PMPCB-204ENST00000444457 ANTXR1Q9H6X2 564 aa24.13■■□□□ 1.45
PMPCB-204ENST00000444457 CLCN1P35523 988 aa24.12■■□□□ 1.45
PMPCB-204ENST00000444457 SENP3Q9H4L4 574 aaPredicted RBP24.12■■□□□ 1.45
PMPCB-204ENST00000444457 PDE3AQ14432 1141 aa24.11■■□□□ 1.45
PMPCB-204ENST00000444457 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
PMPCB-204ENST00000444457 SRPK2P78362 688 aaKnown RBP24.11■■□□□ 1.45
PMPCB-204ENST00000444457 ANKRD26Q9UPS8 1709 aa24.11■■□□□ 1.45
PMPCB-204ENST00000444457 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
PMPCB-204ENST00000444457 CCDC27Q2M243 656 aa24.1■■□□□ 1.45
PMPCB-204ENST00000444457 ATAD2Q6PL18 1390 aa24.1■■□□□ 1.45
PMPCB-204ENST00000444457 ADGRB2O60241 1585 aa24.1■■□□□ 1.45
PMPCB-204ENST00000444457 FBXO31Q5XUX0 539 aaPredicted RBP24.09■■□□□ 1.45
PMPCB-204ENST00000444457 ALKQ9UM73 1620 aa24.09■■□□□ 1.45
PMPCB-204ENST00000444457 FSD2A1L4K1 749 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms