RNA–Protein interactions for RNA: ENST00000444413.1

AP004289.2-201, humanhuman

BASIC

Gene AP004289.2, Length 1,457 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004289.2-201ENST00000444413 PARP9Q8IXQ6 854 aa7.42□□□□□ -1.22
AP004289.2-201ENST00000444413 HOXA2O43364 376 aa7.41□□□□□ -1.22
AP004289.2-201ENST00000444413 PRKD2Q9BZL6 878 aa7.41□□□□□ -1.22
AP004289.2-201ENST00000444413 MSS51Q4VC12 460 aa7.4□□□□□ -1.22
AP004289.2-201ENST00000444413 NUTM1Q86Y26 1132 aa7.4□□□□□ -1.22
AP004289.2-201ENST00000444413 SLC24A3Q9HC58 644 aa7.4□□□□□ -1.22
AP004289.2-201ENST00000444413 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
AP004289.2-201ENST00000444413 CECR2Q9BXF3 1484 aa7.38□□□□□ -1.23
AP004289.2-201ENST00000444413 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
AP004289.2-201ENST00000444413 FAM160A2Q8N612 972 aaPredicted RBP7.38□□□□□ -1.23
AP004289.2-201ENST00000444413 PDE4DQ08499 809 aa7.37□□□□□ -1.23
AP004289.2-201ENST00000444413 DIXDC1Q155Q3 683 aa7.37□□□□□ -1.23
AP004289.2-201ENST00000444413 SPIRE2Q8WWL2 714 aa7.37□□□□□ -1.23
AP004289.2-201ENST00000444413 CC2D2AQ9P2K1 1620 aa7.37□□□□□ -1.23
AP004289.2-201ENST00000444413 PPEF1O14829 653 aaPredicted RBP7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 GJA5P36382 358 aa7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 SLC19A1P41440 591 aa7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 HLA-CQ95604 372 aa7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 USB1Q9BQ65 265 aaKnown RBP7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
AP004289.2-201ENST00000444413 MS4A1P11836 297 aa7.35□□□□□ -1.23
AP004289.2-201ENST00000444413 MMP16P51512 607 aa7.35□□□□□ -1.23
AP004289.2-201ENST00000444413 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
AP004289.2-201ENST00000444413 FDX1P10109 184 aa7.34□□□□□ -1.23
AP004289.2-201ENST00000444413 SPRYD7Q5W111 196 aa7.33□□□□□ -1.24
AP004289.2-201ENST00000444413 MOXD2PA6NHM9 499 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 DXOO77932 396 aaKnown RBP7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 RPIAP49247 311 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 GUCA2AQ02747 115 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 PLA2G2CQ5R387 149 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 LIAT1Q6ZQX7 453 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 RETREG3Q86VR2 466 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 PRDM9Q9NQV7 894 aa7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
AP004289.2-201ENST00000444413 TREML4Q6UXN2 200 aa7.31□□□□□ -1.24
AP004289.2-201ENST00000444413 ZNF598Q86UK7 904 aaKnown RBP7.31□□□□□ -1.24
AP004289.2-201ENST00000444413 TBC1D2Q9BYX2 928 aa7.31□□□□□ -1.24
AP004289.2-201ENST00000444413 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
AP004289.2-201ENST00000444413 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
AP004289.2-201ENST00000444413 SPDYE5A6NIY4 337 aa7.3□□□□□ -1.24
AP004289.2-201ENST00000444413 NDUFV2P19404 249 aa7.3□□□□□ -1.24
AP004289.2-201ENST00000444413 RSBN1LQ6PCB5 846 aaPredicted RBP7.3□□□□□ -1.24
AP004289.2-201ENST00000444413 SPTLC1O15269 473 aa7.29□□□□□ -1.24
AP004289.2-201ENST00000444413 JUNDP17535 347 aa7.29□□□□□ -1.24
AP004289.2-201ENST00000444413 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 PRR20EP86478 221 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 PRR20CP86479 221 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 PRR20DP86480 221 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 PRR20BP86481 221 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 PRR20AP86496 221 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 TUSC1Q2TAM9 212 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 ZNF697Q5TEC3 545 aa7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 SYMPKQ92797 1274 aaKnown RBP7.28□□□□□ -1.24
AP004289.2-201ENST00000444413 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
AP004289.2-201ENST00000444413 MTMR2Q13614 643 aa7.27□□□□□ -1.25
AP004289.2-201ENST00000444413 TRIM67Q6ZTA4 783 aa7.27□□□□□ -1.25
AP004289.2-201ENST00000444413 PDZRN3Q9UPQ7 1066 aa7.27□□□□□ -1.25
AP004289.2-201ENST00000444413 PRPF38BQ5VTL8 546 aaKnown RBP7.26□□□□□ -1.25
AP004289.2-201ENST00000444413 DESI1Q6ICB0 168 aa7.26□□□□□ -1.25
AP004289.2-201ENST00000444413 ZBTB24O43167 697 aaPredicted RBP7.25□□□□□ -1.25
AP004289.2-201ENST00000444413 MYSM1Q5VVJ2 828 aa7.25□□□□□ -1.25
AP004289.2-201ENST00000444413 RIC3Q7Z5B4 369 aa7.25□□□□□ -1.25
AP004289.2-201ENST00000444413 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
AP004289.2-201ENST00000444413 GDF9O60383 454 aa7.24□□□□□ -1.25
AP004289.2-201ENST00000444413 KDM4CQ9H3R0 1056 aa7.24□□□□□ -1.25
AP004289.2-201ENST00000444413 PRR7Q8TB68 274 aa7.24□□□□□ -1.25
AP004289.2-201ENST00000444413 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
AP004289.2-201ENST00000444413 PCDHB15Q9Y5E8 787 aa7.24□□□□□ -1.25
AP004289.2-201ENST00000444413 TRIM32Q13049 653 aa7.23□□□□□ -1.25
AP004289.2-201ENST00000444413 PTPRNQ16849 979 aa7.23□□□□□ -1.25
AP004289.2-201ENST00000444413 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
AP004289.2-201ENST00000444413 DDRGK1Q96HY6 314 aa7.23□□□□□ -1.25
AP004289.2-201ENST00000444413 NUDT12Q9BQG2 462 aa7.23□□□□□ -1.25
AP004289.2-201ENST00000444413 HRCP23327 699 aa7.22□□□□□ -1.25
AP004289.2-201ENST00000444413 GPBP1L1Q9HC44 474 aaPredicted RBP7.22□□□□□ -1.25
AP004289.2-201ENST00000444413 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
AP004289.2-201ENST00000444413 SMARCA2P51531 1590 aa7.21□□□□□ -1.25
AP004289.2-201ENST00000444413 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.25
AP004289.2-201ENST00000444413 CCNYL3P0C7X3 344 aa7.21□□□□□ -1.26
AP004289.2-201ENST00000444413 CLK2P49760 499 aaKnown RBP7.21□□□□□ -1.26
AP004289.2-201ENST00000444413 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
AP004289.2-201ENST00000444413 LIMD1Q9UGP4 676 aa7.21□□□□□ -1.26
AP004289.2-201ENST00000444413 LILRB3O75022 631 aa7.2□□□□□ -1.26
AP004289.2-201ENST00000444413 EVA1BQ9NVM1 165 aa7.2□□□□□ -1.26
AP004289.2-201ENST00000444413 NCAPD3P42695 1498 aa7.2□□□□□ -1.26
AP004289.2-201ENST00000444413 WNT7AO00755 349 aa7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 DGAT1O75907 488 aa7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 WNT7BP56706 349 aa7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 SH3D19Q5HYK7 790 aa7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 SMARCA4P51532 1647 aa7.19□□□□□ -1.26
AP004289.2-201ENST00000444413 POTECB2RU33 542 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 CFAP99D6REC4 459 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 SKIV2LQ15477 1246 aaKnown RBP7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 LYPD8Q6UX82 237 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 FAM117AQ9C073 453 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 ATAD2BQ9ULI0 1458 aa7.18□□□□□ -1.26
AP004289.2-201ENST00000444413 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
AP004289.2-201ENST00000444413 FOXC1Q12948 553 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms