RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 ATF3P18847 181 aa25.34■■□□□ 1.65
CIRBP-203ENST00000444172 MINK1Q8N4C8 1332 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-203ENST00000444172 UBAP1LF5GYI3 381 aa25.33■■□□□ 1.65
CIRBP-203ENST00000444172 TOM1O60784 492 aa25.33■■□□□ 1.65
CIRBP-203ENST00000444172 ADGRL3Q9HAR2 1447 aa25.33■■□□□ 1.65
CIRBP-203ENST00000444172 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.64
CIRBP-203ENST00000444172 EIF3AQ14152 1382 aaKnown RBP25.32■■□□□ 1.64
CIRBP-203ENST00000444172 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
CIRBP-203ENST00000444172 CADPS2Q86UW7 1296 aa25.3■■□□□ 1.64
CIRBP-203ENST00000444172 SCAF1Q9H7N4 1312 aaKnown RBP25.27■■□□□ 1.64
CIRBP-203ENST00000444172 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
CIRBP-203ENST00000444172 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
CIRBP-203ENST00000444172 NUTM2FA1L443 756 aa25.25■■□□□ 1.63
CIRBP-203ENST00000444172 DCCP43146 1447 aa25.24■■□□□ 1.63
CIRBP-203ENST00000444172 USP47Q96K76 1375 aa25.24■■□□□ 1.63
CIRBP-203ENST00000444172 ST20-MTHFSA0A0A6YYL1 179 aa25.24■■□□□ 1.63
CIRBP-203ENST00000444172 SLAIN2Q9P270 581 aa25.24■■□□□ 1.63
CIRBP-203ENST00000444172 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
CIRBP-203ENST00000444172 CDC42BPGQ6DT37 1551 aa25.21■■□□□ 1.63
CIRBP-203ENST00000444172 WASLO00401 505 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-203ENST00000444172 EIF4G2P78344 907 aaKnown RBP eCLIP25.19■■□□□ 1.62
CIRBP-203ENST00000444172 CDK19Q9BWU1 502 aa25.19■■□□□ 1.62
CIRBP-203ENST00000444172 ADGRB2O60241 1585 aa25.18■■□□□ 1.62
CIRBP-203ENST00000444172 MST1RQ04912 1400 aa25.18■■□□□ 1.62
CIRBP-203ENST00000444172 FBXO41Q8TF61 875 aa25.17■■□□□ 1.62
CIRBP-203ENST00000444172 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
CIRBP-203ENST00000444172 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
CIRBP-203ENST00000444172 EVC2Q86UK5 1308 aa25.15■■□□□ 1.62
CIRBP-203ENST00000444172 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
CIRBP-203ENST00000444172 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
CIRBP-203ENST00000444172 ESCO1Q5FWF5 840 aa25.14■■□□□ 1.62
CIRBP-203ENST00000444172 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-203ENST00000444172 ORAI2Q96SN7 254 aa25.13■■□□□ 1.61
CIRBP-203ENST00000444172 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
CIRBP-203ENST00000444172 SBNO2Q9Y2G9 1366 aa25.11■■□□□ 1.61
CIRBP-203ENST00000444172 TESK2Q96S53 571 aa25.11■■□□□ 1.61
CIRBP-203ENST00000444172 ROBO1Q9Y6N7 1651 aa25.1■■□□□ 1.61
CIRBP-203ENST00000444172 BRINP3Q76B58 766 aa25.1■■□□□ 1.61
CIRBP-203ENST00000444172 NUDT16Q96DE0 195 aaKnown RBP25.1■■□□□ 1.61
CIRBP-203ENST00000444172 TULP4Q9NRJ4 1543 aa25.09■■□□□ 1.61
CIRBP-203ENST00000444172 SLC24A1O60721 1099 aa25.09■■□□□ 1.61
CIRBP-203ENST00000444172 TMF1P82094 1093 aa25.08■■□□□ 1.61
CIRBP-203ENST00000444172 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.6
CIRBP-203ENST00000444172 USP32Q8NFA0 1604 aa25.07■■□□□ 1.6
CIRBP-203ENST00000444172 ANKARQ7Z5J8 1434 aa25.06■■□□□ 1.6
CIRBP-203ENST00000444172 PMFBP1Q8TBY8 1022 aa25.05■■□□□ 1.6
CIRBP-203ENST00000444172 PHF8Q9UPP1 1060 aa25.04■■□□□ 1.6
CIRBP-203ENST00000444172 DDX17Q92841 729 aaKnown RBP25.03■■□□□ 1.6
CIRBP-203ENST00000444172 CCDC61Q9Y6R9 512 aa25.03■■□□□ 1.6
CIRBP-203ENST00000444172 ATP7BP35670 1465 aa25.02■■□□□ 1.6
CIRBP-203ENST00000444172 ITSN1Q15811 1721 aa25.01■■□□□ 1.59
CIRBP-203ENST00000444172 FOXO3O43524 673 aa25.01■■□□□ 1.59
CIRBP-203ENST00000444172 DISP3Q9P2K9 1392 aa25.01■■□□□ 1.59
CIRBP-203ENST00000444172 POLR3GLQ9BT43 218 aa24.99■■□□□ 1.59
CIRBP-203ENST00000444172 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 HSPA1LP34931 641 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 CDCA8Q53HL2 280 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
CIRBP-203ENST00000444172 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
CIRBP-203ENST00000444172 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 CABP1Q9NZU7 370 aa24.98■■□□□ 1.59
CIRBP-203ENST00000444172 KIF1AQ12756 1690 aa24.97■■□□□ 1.59
CIRBP-203ENST00000444172 PHLPP1O60346 1717 aa24.97■■□□□ 1.59
CIRBP-203ENST00000444172 XPCQ01831 940 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-203ENST00000444172 PSME1Q06323 249 aa24.96■■□□□ 1.59
CIRBP-203ENST00000444172 PUS7Q96PZ0 661 aaKnown RBP24.96■■□□□ 1.59
CIRBP-203ENST00000444172 TOPAZ1Q8N9V7 1692 aa24.96■■□□□ 1.59
CIRBP-203ENST00000444172 NPHP3Q7Z494 1330 aa24.95■■□□□ 1.58
CIRBP-203ENST00000444172 PLEKHG3A1L390 1219 aa24.94■■□□□ 1.58
CIRBP-203ENST00000444172 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
CIRBP-203ENST00000444172 ACEP12821 1306 aa24.93■■□□□ 1.58
CIRBP-203ENST00000444172 KRT28Q7Z3Y7 464 aa24.93■■□□□ 1.58
CIRBP-203ENST00000444172 SLC12A5Q9H2X9 1139 aa24.92■■□□□ 1.58
CIRBP-203ENST00000444172 AHDC1Q5TGY3 1603 aaPredicted RBP24.92■■□□□ 1.58
CIRBP-203ENST00000444172 C11orf95C9JLR9 678 aaPredicted RBP24.91■■□□□ 1.58
CIRBP-203ENST00000444172 SOS2Q07890 1332 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-203ENST00000444172 LRRC59Q96AG4 307 aaKnown RBP24.87■■□□□ 1.57
CIRBP-203ENST00000444172 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-203ENST00000444172 PAK3O75914 559 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-203ENST00000444172 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-203ENST00000444172 PXDNQ92626 1479 aa24.85■■□□□ 1.57
CIRBP-203ENST00000444172 HDGFL2Q7Z4V5 671 aaPredicted RBP24.84■■□□□ 1.57
CIRBP-203ENST00000444172 ZNF692Q9BU19 519 aaPredicted RBP24.84■■□□□ 1.57
CIRBP-203ENST00000444172 LMOD2Q6P5Q4 547 aa24.83■■□□□ 1.57
CIRBP-203ENST00000444172 TERF2IPQ9NYB0 399 aa24.83■■□□□ 1.57
CIRBP-203ENST00000444172 KIF7Q2M1P5 1343 aa24.83■■□□□ 1.56
CIRBP-203ENST00000444172 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
CIRBP-203ENST00000444172 AKAP12Q02952 1782 aa24.81■■□□□ 1.56
CIRBP-203ENST00000444172 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
CIRBP-203ENST00000444172 SPATA31A3Q5VYP0 1347 aa24.79■■□□□ 1.56
CIRBP-203ENST00000444172 SBNO1A3KN83 1393 aa24.79■■□□□ 1.56
CIRBP-203ENST00000444172 CPSF1Q10570 1443 aaKnown RBP24.78■■□□□ 1.56
CIRBP-203ENST00000444172 CD163L1Q9NR16 1453 aa24.78■■□□□ 1.56
CIRBP-203ENST00000444172 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
CIRBP-203ENST00000444172 MYOM1P52179 1685 aa24.78■■□□□ 1.56
CIRBP-203ENST00000444172 USP6P35125 1406 aa24.78■■□□□ 1.56
CIRBP-203ENST00000444172 TRPM3Q9HCF6 1732 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-203ENST00000444172 A0A1W2PP64 1363 aa24.77■■□□□ 1.56
CIRBP-203ENST00000444172 JCADQ9P266 1359 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms