RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
CTDSP1-204ENST00000443891 RXRBP28702 533 aa24.14■■□□□ 1.45
CTDSP1-204ENST00000443891 DDX17Q92841 729 aaKnown RBP24.14■■□□□ 1.45
CTDSP1-204ENST00000443891 NPHP3Q7Z494 1330 aa24.13■■□□□ 1.45
CTDSP1-204ENST00000443891 CDK12Q9NYV4 1490 aaPredicted RBP24.13■■□□□ 1.45
CTDSP1-204ENST00000443891 AFF2P51816 1311 aa24.11■■□□□ 1.45
CTDSP1-204ENST00000443891 HRCP23327 699 aa24.11■■□□□ 1.45
CTDSP1-204ENST00000443891 C14orf93Q9H972 538 aaKnown RBP24.11■■□□□ 1.45
CTDSP1-204ENST00000443891 STK26Q9P289 416 aa24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 MYOM2P54296 1465 aa24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 NRXN1Q9ULB1 1477 aa24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 YTHDC2Q9H6S0 1430 aaKnown RBP24.1■■□□□ 1.45
CTDSP1-204ENST00000443891 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
CTDSP1-204ENST00000443891 DHX57Q6P158 1386 aaKnown RBP24.07■■□□□ 1.44
CTDSP1-204ENST00000443891 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
CTDSP1-204ENST00000443891 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
CTDSP1-204ENST00000443891 C8orf37Q96NL8 207 aa24.07■■□□□ 1.44
CTDSP1-204ENST00000443891 STAC3Q96MF2 364 aa24.06■■□□□ 1.44
CTDSP1-204ENST00000443891 RBM6P78332 1123 aaKnown RBP24.04■■□□□ 1.44
CTDSP1-204ENST00000443891 QTRT2Q9H974 415 aaKnown RBP24.04■■□□□ 1.44
CTDSP1-204ENST00000443891 NGLY1Q96IV0 654 aa24.03■■□□□ 1.44
CTDSP1-204ENST00000443891 COL22A1Q8NFW1 1626 aaPredicted RBP24.02■■□□□ 1.44
CTDSP1-204ENST00000443891 PXDNQ92626 1479 aa24.01■■□□□ 1.43
CTDSP1-204ENST00000443891 FOXO3O43524 673 aa24.01■■□□□ 1.43
CTDSP1-204ENST00000443891 PLEKHH1Q9ULM0 1364 aa24.01■■□□□ 1.43
CTDSP1-204ENST00000443891 ADAMTS2O95450 1211 aa24■■□□□ 1.43
CTDSP1-204ENST00000443891 CFAP70Q5T0N1 1121 aa24■■□□□ 1.43
CTDSP1-204ENST00000443891 FNBP4Q8N3X1 1017 aaPredicted RBP23.99■■□□□ 1.43
CTDSP1-204ENST00000443891 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.434e-7■■■■■ 28.8
CTDSP1-204ENST00000443891 DLC1Q96QB1 1528 aa23.96■■□□□ 1.43
CTDSP1-204ENST00000443891 TRPC5Q9UL62 973 aaPredicted RBP23.96■■□□□ 1.43
CTDSP1-204ENST00000443891 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
CTDSP1-204ENST00000443891 USP21Q9UK80 565 aa23.95■■□□□ 1.42
CTDSP1-204ENST00000443891 KIF1AQ12756 1690 aa23.95■■□□□ 1.42
CTDSP1-204ENST00000443891 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
CTDSP1-204ENST00000443891 PSME1Q06323 249 aa23.92■■□□□ 1.42
CTDSP1-204ENST00000443891 PRAM1Q96QH2 718 aa23.92■■□□□ 1.42
CTDSP1-204ENST00000443891 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
CTDSP1-204ENST00000443891 POGKQ9P215 609 aa23.91■■□□□ 1.42
CTDSP1-204ENST00000443891 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
CTDSP1-204ENST00000443891 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
CTDSP1-204ENST00000443891 RGS12O14924 1447 aa23.9■■□□□ 1.42
CTDSP1-204ENST00000443891 ANKARQ7Z5J8 1434 aa23.9■■□□□ 1.42
CTDSP1-204ENST00000443891 XPCQ01831 940 aaPredicted RBP23.89■■□□□ 1.41
CTDSP1-204ENST00000443891 ADGRB1O14514 1584 aa23.88■■□□□ 1.41
CTDSP1-204ENST00000443891 ATRNO75882 1429 aa23.88■■□□□ 1.41
CTDSP1-204ENST00000443891 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
CTDSP1-204ENST00000443891 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
CTDSP1-204ENST00000443891 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
CTDSP1-204ENST00000443891 ADGRB2O60241 1585 aa23.86■■□□□ 1.41
CTDSP1-204ENST00000443891 BCL9LQ86UU0 1499 aa23.84■■□□□ 1.41
CTDSP1-204ENST00000443891 KDM2AQ9Y2K7 1162 aa23.84■■□□□ 1.41
CTDSP1-204ENST00000443891 TNS3Q68CZ2 1445 aa23.84■■□□□ 1.41
CTDSP1-204ENST00000443891 SAFB2Q14151 953 aaKnown RBP eCLIP23.83■■□□□ 1.41
CTDSP1-204ENST00000443891 ARHGEF10O15013 1369 aa23.82■■□□□ 1.4
CTDSP1-204ENST00000443891 ATAD2Q6PL18 1390 aa23.82■■□□□ 1.4
CTDSP1-204ENST00000443891 TRAK1Q9UPV9 953 aa23.82■■□□□ 1.4
CTDSP1-204ENST00000443891 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
CTDSP1-204ENST00000443891 UNC5CLQ8IV45 518 aa23.79■■□□□ 1.4
CTDSP1-204ENST00000443891 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
CTDSP1-204ENST00000443891 SLIT2O94813 1529 aa23.79■■□□□ 1.4
CTDSP1-204ENST00000443891 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
CTDSP1-204ENST00000443891 HAP1P54257 671 aaPredicted RBP23.77■■□□□ 1.4
CTDSP1-204ENST00000443891 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
CTDSP1-204ENST00000443891 TULP4Q9NRJ4 1543 aa23.75■■□□□ 1.39
CTDSP1-204ENST00000443891 USP32Q8NFA0 1604 aa23.75■■□□□ 1.39
CTDSP1-204ENST00000443891 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
CTDSP1-204ENST00000443891 RGPD8O14715 1765 aaPredicted RBP23.74■■□□□ 1.39
CTDSP1-204ENST00000443891 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
CTDSP1-204ENST00000443891 MINK1Q8N4C8 1332 aaPredicted RBP23.74■■□□□ 1.39
CTDSP1-204ENST00000443891 CCDC125Q86Z20 511 aa23.73■■□□□ 1.39
CTDSP1-204ENST00000443891 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
CTDSP1-204ENST00000443891 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
CTDSP1-204ENST00000443891 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
CTDSP1-204ENST00000443891 VPS72Q15906 364 aa23.69■■□□□ 1.38
CTDSP1-204ENST00000443891 RALGAPBQ86X10 1494 aa23.68■■□□□ 1.38
CTDSP1-204ENST00000443891 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
CTDSP1-204ENST00000443891 CABLES1Q8TDN4 633 aa23.67■■□□□ 1.38
CTDSP1-204ENST00000443891 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
CTDSP1-204ENST00000443891 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
CTDSP1-204ENST00000443891 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.38
CTDSP1-204ENST00000443891 TRPM3Q9HCF6 1732 aaPredicted RBP23.64■■□□□ 1.38
CTDSP1-204ENST00000443891 ONECUT3O60422 494 aaPredicted RBP23.64■■□□□ 1.37
CTDSP1-204ENST00000443891 NUDT16Q96DE0 195 aaKnown RBP23.64■■□□□ 1.37
CTDSP1-204ENST00000443891 GLI3P10071 1580 aa23.63■■□□□ 1.37
CTDSP1-204ENST00000443891 ATP7BP35670 1465 aa23.62■■□□□ 1.37
CTDSP1-204ENST00000443891 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
CTDSP1-204ENST00000443891 ABCA3Q99758 1704 aa23.62■■□□□ 1.37
CTDSP1-204ENST00000443891 ALS2Q96Q42 1657 aa23.61■■□□□ 1.37
CTDSP1-204ENST00000443891 ITSN1Q15811 1721 aa23.6■■□□□ 1.37
CTDSP1-204ENST00000443891 CDK19Q9BWU1 502 aa23.6■■□□□ 1.37
CTDSP1-204ENST00000443891 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
CTDSP1-204ENST00000443891 PLCH1Q4KWH8 1693 aa23.58■■□□□ 1.37
CTDSP1-204ENST00000443891 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
CTDSP1-204ENST00000443891 PLEKHG3A1L390 1219 aa23.58■■□□□ 1.37
CTDSP1-204ENST00000443891 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.37
CTDSP1-204ENST00000443891 PAK3O75914 559 aaPredicted RBP23.57■■□□□ 1.36
CTDSP1-204ENST00000443891 CCDC9Q9Y3X0 531 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms