RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 RRBP1Q9P2E9 1410 aaKnown RBP10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 PSEN2P49810 448 aa10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 MDM2Q00987 491 aaPredicted RBP10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 METTL3Q86U44 580 aaKnown RBP10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
R3HDM1-210ENST00000443537 TRIM6-TRIM34B2RNG4 842 aa10.82□□□□□ -0.68
R3HDM1-210ENST00000443537 TRIM26Q12899 539 aaPredicted RBP10.82□□□□□ -0.68
R3HDM1-210ENST00000443537 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
R3HDM1-210ENST00000443537 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
R3HDM1-210ENST00000443537 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
R3HDM1-210ENST00000443537 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 PREX2Q70Z35 1606 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 ABCA9Q8IUA7 1624 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 CLCN1P35523 988 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 PROX2Q3B8N5 592 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 PHOX2BQ99453 314 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 FAM198AQ9UFP1 575 aa10.81□□□□□ -0.68
R3HDM1-210ENST00000443537 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
R3HDM1-210ENST00000443537 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
R3HDM1-210ENST00000443537 AXIN2Q9Y2T1 843 aa10.8□□□□□ -0.68
R3HDM1-210ENST00000443537 ABCC10Q5T3U5 1492 aa10.8□□□□□ -0.68
R3HDM1-210ENST00000443537 CCNB3Q8WWL7 1395 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 FGD6Q6ZV73 1430 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 ASXL2Q76L83 1435 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
R3HDM1-210ENST00000443537 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
R3HDM1-210ENST00000443537 PBX2P40425 430 aa10.78□□□□□ -0.68
R3HDM1-210ENST00000443537 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
R3HDM1-210ENST00000443537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.78□□□□□ -0.68
R3HDM1-210ENST00000443537 GLI2P10070 1586 aa10.77□□□□□ -0.68
R3HDM1-210ENST00000443537 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.68
R3HDM1-210ENST00000443537 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 TATDN2Q93075 761 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 HS3ST6Q96QI5 342 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.69
R3HDM1-210ENST00000443537 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 PLEKHH2Q8IVE3 1493 aa10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 CDC42BPBQ9Y5S2 1711 aa10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 KIAA1468Q9P260 1216 aa10.76□□□□□ -0.69
R3HDM1-210ENST00000443537 GPATCH8Q9UKJ3 1502 aaKnown RBP10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 SMAPO00193 183 aa10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 REPIN1Q9BWE0 567 aaKnown RBP10.75□□□□□ -0.69
R3HDM1-210ENST00000443537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
R3HDM1-210ENST00000443537 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
R3HDM1-210ENST00000443537 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
R3HDM1-210ENST00000443537 EYA1Q99502 592 aa10.74□□□□□ -0.69
R3HDM1-210ENST00000443537 MAP3K4Q9Y6R4 1608 aa10.73□□□□□ -0.69
R3HDM1-210ENST00000443537 PLCH2O75038 1416 aa10.73□□□□□ -0.69
R3HDM1-210ENST00000443537 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 MS4A1P11836 297 aa10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 ARHGAP5Q13017 1502 aa10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 DIP2BQ9P265 1576 aa10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
R3HDM1-210ENST00000443537 CROCC2H7BZ55 1655 aa10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 DNAJB2P25686 324 aa10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 CFDP1Q9UEE9 299 aaPredicted RBP10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 RABGEF1Q9UJ41 708 aa10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
R3HDM1-210ENST00000443537 CAMSAP2Q08AD1 1489 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 KIAA1107Q9UPP5 1409 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
R3HDM1-210ENST00000443537 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 SEPT9Q9UHD8 586 aaPredicted RBP10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 VPS9D1Q9Y2B5 631 aa10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 KIF13AQ9H1H9 1805 aa10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
R3HDM1-210ENST00000443537 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 NEO1Q92859 1461 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 SAMD9LQ8IVG5 1584 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 ABCC1P33527 1531 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 FANCAO15360 1455 aa10.68□□□□□ -0.7
R3HDM1-210ENST00000443537 CD109Q6YHK3 1445 aa10.67□□□□□ -0.7
R3HDM1-210ENST00000443537 EFCAB2Q5VUJ9 269 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms