RNA–Protein interactions for RNA: ENST00000442522.6

CCDC66-208, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 2,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-208ENST00000442522 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
CCDC66-208ENST00000442522 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
CCDC66-208ENST00000442522 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
CCDC66-208ENST00000442522 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
CCDC66-208ENST00000442522 TESK2Q96S53 571 aa13.48□□□□□ -0.25
CCDC66-208ENST00000442522 TMEM94Q12767 1356 aa13.48□□□□□ -0.25
CCDC66-208ENST00000442522 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
CCDC66-208ENST00000442522 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
CCDC66-208ENST00000442522 ADGRB2O60241 1585 aa13.46□□□□□ -0.25
CCDC66-208ENST00000442522 MSH6P52701 1360 aa13.46□□□□□ -0.25
CCDC66-208ENST00000442522 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
CCDC66-208ENST00000442522 C19orf44Q9H6X5 657 aa13.45□□□□□ -0.26
CCDC66-208ENST00000442522 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
CCDC66-208ENST00000442522 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
CCDC66-208ENST00000442522 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
CCDC66-208ENST00000442522 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
CCDC66-208ENST00000442522 WASLO00401 505 aaPredicted RBP13.44□□□□□ -0.26
CCDC66-208ENST00000442522 LTBP4Q8N2S1 1624 aa13.44□□□□□ -0.26
CCDC66-208ENST00000442522 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
CCDC66-208ENST00000442522 ATF3P18847 181 aa13.44□□□□□ -0.26
CCDC66-208ENST00000442522 DCCP43146 1447 aa13.43□□□□□ -0.26
CCDC66-208ENST00000442522 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
CCDC66-208ENST00000442522 CDK19Q9BWU1 502 aa13.43□□□□□ -0.26
CCDC66-208ENST00000442522 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
CCDC66-208ENST00000442522 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
CCDC66-208ENST00000442522 TULP4Q9NRJ4 1543 aa13.42□□□□□ -0.26
CCDC66-208ENST00000442522 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CCDC66-208ENST00000442522 ATAD2Q6PL18 1390 aa13.42□□□□□ -0.26
CCDC66-208ENST00000442522 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
CCDC66-208ENST00000442522 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
CCDC66-208ENST00000442522 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
CCDC66-208ENST00000442522 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
CCDC66-208ENST00000442522 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
CCDC66-208ENST00000442522 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
CCDC66-208ENST00000442522 NINLQ9Y2I6 1382 aa13.38□□□□□ -0.27
CCDC66-208ENST00000442522 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 IQSEC2Q5JU85 1478 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
CCDC66-208ENST00000442522 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
CCDC66-208ENST00000442522 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
CCDC66-208ENST00000442522 ATP7BP35670 1465 aa13.36□□□□□ -0.27
CCDC66-208ENST00000442522 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
CCDC66-208ENST00000442522 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
CCDC66-208ENST00000442522 MST1RQ04912 1400 aa13.34□□□□□ -0.27
CCDC66-208ENST00000442522 TOM1O60784 492 aa13.34□□□□□ -0.27
CCDC66-208ENST00000442522 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
CCDC66-208ENST00000442522 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
CCDC66-208ENST00000442522 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
CCDC66-208ENST00000442522 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
CCDC66-208ENST00000442522 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
CCDC66-208ENST00000442522 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
CCDC66-208ENST00000442522 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
CCDC66-208ENST00000442522 CABP1Q9NZU7 370 aa13.32□□□□□ -0.28
CCDC66-208ENST00000442522 TOPAZ1Q8N9V7 1692 aa13.32□□□□□ -0.28
CCDC66-208ENST00000442522 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
CCDC66-208ENST00000442522 RGPD8O14715 1765 aaPredicted RBP13.31□□□□□ -0.28
CCDC66-208ENST00000442522 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
CCDC66-208ENST00000442522 NGDNQ8NEJ9 315 aaKnown RBP13.31□□□□□ -0.28
CCDC66-208ENST00000442522 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
CCDC66-208ENST00000442522 MYOM1P52179 1685 aa13.31□□□□□ -0.28
CCDC66-208ENST00000442522 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
CCDC66-208ENST00000442522 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
CCDC66-208ENST00000442522 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
CCDC66-208ENST00000442522 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
CCDC66-208ENST00000442522 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
CCDC66-208ENST00000442522 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
CCDC66-208ENST00000442522 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
CCDC66-208ENST00000442522 ACEP12821 1306 aa13.28□□□□□ -0.28
CCDC66-208ENST00000442522 PANK3Q9H999 370 aa13.28□□□□□ -0.28
CCDC66-208ENST00000442522 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.28
CCDC66-208ENST00000442522 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
CCDC66-208ENST00000442522 PSME1Q06323 249 aa13.27□□□□□ -0.29
CCDC66-208ENST00000442522 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
CCDC66-208ENST00000442522 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
CCDC66-208ENST00000442522 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
CCDC66-208ENST00000442522 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
CCDC66-208ENST00000442522 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
CCDC66-208ENST00000442522 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
CCDC66-208ENST00000442522 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
CCDC66-208ENST00000442522 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
CCDC66-208ENST00000442522 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
CCDC66-208ENST00000442522 FOXO3O43524 673 aa13.25□□□□□ -0.29
CCDC66-208ENST00000442522 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
CCDC66-208ENST00000442522 PIP4K2BP78356 416 aa13.24□□□□□ -0.29
CCDC66-208ENST00000442522 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
CCDC66-208ENST00000442522 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
CCDC66-208ENST00000442522 USP6P35125 1406 aa13.23□□□□□ -0.29
CCDC66-208ENST00000442522 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
CCDC66-208ENST00000442522 NSD3Q9BZ95 1437 aa13.23□□□□□ -0.29
CCDC66-208ENST00000442522 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
CCDC66-208ENST00000442522 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
CCDC66-208ENST00000442522 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
CCDC66-208ENST00000442522 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
CCDC66-208ENST00000442522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC66-208ENST00000442522 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
CCDC66-208ENST00000442522 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
CCDC66-208ENST00000442522 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms