RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
NLE1-202ENST00000442241 SRPK2P78362 688 aaKnown RBP20.98■□□□□ 0.95
NLE1-202ENST00000442241 SBNO2Q9Y2G9 1366 aa20.98■□□□□ 0.95
NLE1-202ENST00000442241 SETBP1Q9Y6X0 1596 aa20.98■□□□□ 0.95
NLE1-202ENST00000442241 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
NLE1-202ENST00000442241 TRMT2AQ8IZ69 625 aaKnown RBP20.97■□□□□ 0.95
NLE1-202ENST00000442241 BACH2Q9BYV9 841 aa20.97■□□□□ 0.95
NLE1-202ENST00000442241 PRKCSHP14314 528 aaPredicted RBP20.97■□□□□ 0.95
NLE1-202ENST00000442241 GLI2P10070 1586 aa20.97■□□□□ 0.95
NLE1-202ENST00000442241 MLECQ14165 292 aa20.96■□□□□ 0.95
NLE1-202ENST00000442241 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
NLE1-202ENST00000442241 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
NLE1-202ENST00000442241 ZC3H13Q5T200 1668 aaKnown RBP20.96■□□□□ 0.95
NLE1-202ENST00000442241 EVC2Q86UK5 1308 aa20.95■□□□□ 0.95
NLE1-202ENST00000442241 BCL2L13Q9BXK5 485 aa20.95■□□□□ 0.95
NLE1-202ENST00000442241 RGS3P49796 1198 aa20.95■□□□□ 0.94
NLE1-202ENST00000442241 TCP11L2Q8N4U5 519 aa20.95■□□□□ 0.94
NLE1-202ENST00000442241 GGNBP2Q9H3C7 697 aa20.95■□□□□ 0.94
NLE1-202ENST00000442241 MYO5BQ9ULV0 1848 aa20.95■□□□□ 0.94
NLE1-202ENST00000442241 E9PSI1 815 aa20.94■□□□□ 0.94
NLE1-202ENST00000442241 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
NLE1-202ENST00000442241 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
NLE1-202ENST00000442241 NEXMIFQ5QGS0 1516 aa20.94■□□□□ 0.94
NLE1-202ENST00000442241 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
NLE1-202ENST00000442241 NEO1Q92859 1461 aa20.94■□□□□ 0.94
NLE1-202ENST00000442241 CGNL1Q0VF96 1302 aa20.94■□□□□ 0.94
NLE1-202ENST00000442241 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
NLE1-202ENST00000442241 POLR3AO14802 1390 aaPredicted RBP20.93■□□□□ 0.94
NLE1-202ENST00000442241 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
NLE1-202ENST00000442241 PANK1Q8TE04 598 aa20.93■□□□□ 0.94
NLE1-202ENST00000442241 KDM2BQ8NHM5 1336 aa20.93■□□□□ 0.94
NLE1-202ENST00000442241 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
NLE1-202ENST00000442241 TNNQ9UQP3 1299 aa20.92■□□□□ 0.94
NLE1-202ENST00000442241 CANXP27824 592 aaKnown RBP20.92■□□□□ 0.94
NLE1-202ENST00000442241 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
NLE1-202ENST00000442241 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
NLE1-202ENST00000442241 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
NLE1-202ENST00000442241 PIK3C2BO00750 1634 aa20.91■□□□□ 0.94
NLE1-202ENST00000442241 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
NLE1-202ENST00000442241 POGKQ9P215 609 aa20.9■□□□□ 0.94
NLE1-202ENST00000442241 COG6Q9Y2V7 657 aa20.9■□□□□ 0.94
NLE1-202ENST00000442241 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
NLE1-202ENST00000442241 RUNDC1Q96C34 613 aa20.9■□□□□ 0.94
NLE1-202ENST00000442241 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.94
NLE1-202ENST00000442241 FBLN1P23142 703 aa20.89■□□□□ 0.93
NLE1-202ENST00000442241 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
NLE1-202ENST00000442241 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
NLE1-202ENST00000442241 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
NLE1-202ENST00000442241 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
NLE1-202ENST00000442241 MS4A1P11836 297 aa20.87■□□□□ 0.93
NLE1-202ENST00000442241 A0A1W2PP64 1363 aa20.87■□□□□ 0.93
NLE1-202ENST00000442241 IGHDP01880 384 aa20.87■□□□□ 0.93
NLE1-202ENST00000442241 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
NLE1-202ENST00000442241 CFAP53Q96M91 514 aa20.86■□□□□ 0.93
NLE1-202ENST00000442241 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
NLE1-202ENST00000442241 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
NLE1-202ENST00000442241 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
NLE1-202ENST00000442241 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
NLE1-202ENST00000442241 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
NLE1-202ENST00000442241 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
NLE1-202ENST00000442241 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
NLE1-202ENST00000442241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.81■□□□□ 0.92
NLE1-202ENST00000442241 RLBP1P12271 317 aa20.81■□□□□ 0.92
NLE1-202ENST00000442241 CABP1Q9NZU7 370 aa20.81■□□□□ 0.92
NLE1-202ENST00000442241 PREX1Q8TCU6 1659 aa20.81■□□□□ 0.92
NLE1-202ENST00000442241 CDK19Q9BWU1 502 aa20.8■□□□□ 0.92
NLE1-202ENST00000442241 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
NLE1-202ENST00000442241 FYB1O15117 783 aa20.79■□□□□ 0.92
NLE1-202ENST00000442241 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
NLE1-202ENST00000442241 TMEM131LA2VDJ0 1609 aa20.79■□□□□ 0.92
NLE1-202ENST00000442241 ANO8Q9HCE9 1232 aaPredicted RBP20.79■□□□□ 0.92
NLE1-202ENST00000442241 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
NLE1-202ENST00000442241 PTPRMP28827 1452 aa20.77■□□□□ 0.92
NLE1-202ENST00000442241 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.91
NLE1-202ENST00000442241 C8orf34Q49A92 452 aa20.76■□□□□ 0.91
NLE1-202ENST00000442241 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
NLE1-202ENST00000442241 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
NLE1-202ENST00000442241 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
NLE1-202ENST00000442241 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
NLE1-202ENST00000442241 USP35Q9P2H5 1018 aa20.73■□□□□ 0.91
NLE1-202ENST00000442241 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
NLE1-202ENST00000442241 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
NLE1-202ENST00000442241 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
NLE1-202ENST00000442241 PDE3AQ14432 1141 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 CD163L1Q9NR16 1453 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 ALKQ9UM73 1620 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 PCDHB15Q9Y5E8 787 aa20.71■□□□□ 0.91
NLE1-202ENST00000442241 ZRANB1Q9UGI0 708 aa20.7■□□□□ 0.9
NLE1-202ENST00000442241 EXOSC9Q06265 439 aaKnown RBP20.7■□□□□ 0.9
NLE1-202ENST00000442241 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
NLE1-202ENST00000442241 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
NLE1-202ENST00000442241 HDGFL2Q7Z4V5 671 aaPredicted RBP20.69■□□□□ 0.9
NLE1-202ENST00000442241 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
NLE1-202ENST00000442241 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
NLE1-202ENST00000442241 CLTCQ00610 1675 aaKnown RBP20.68■□□□□ 0.9
NLE1-202ENST00000442241 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms