RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MST1RQ04912 1400 aa21.6■■□□□ 1.05
CSNK1E-210ENST00000442216 PLEKHH1Q9ULM0 1364 aa21.59■■□□□ 1.05
CSNK1E-210ENST00000442216 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
CSNK1E-210ENST00000442216 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
CSNK1E-210ENST00000442216 HSPA1LP34931 641 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 NBPF1Q3BBV0 1214 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 POGKQ9P215 609 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 FMN2Q9NZ56 1722 aa21.55■■□□□ 1.04
CSNK1E-210ENST00000442216 C1orf167Q5SNV9 1468 aa21.53■■□□□ 1.04
CSNK1E-210ENST00000442216 PHLPP1O60346 1717 aa21.52■■□□□ 1.04
CSNK1E-210ENST00000442216 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
CSNK1E-210ENST00000442216 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
CSNK1E-210ENST00000442216 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
CSNK1E-210ENST00000442216 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
CSNK1E-210ENST00000442216 NHSL1Q5SYE7 1610 aa21.5■■□□□ 1.03
CSNK1E-210ENST00000442216 ROCK2O75116 1388 aaKnown RBP21.49■■□□□ 1.03
CSNK1E-210ENST00000442216 GPRASP1Q5JY77 1395 aa21.49■■□□□ 1.03
CSNK1E-210ENST00000442216 RALGAPBQ86X10 1494 aa21.48■■□□□ 1.03
CSNK1E-210ENST00000442216 RGPD8O14715 1765 aaPredicted RBP21.47■■□□□ 1.03
CSNK1E-210ENST00000442216 SAFB2Q14151 953 aaKnown RBP eCLIP21.47■■□□□ 1.03
CSNK1E-210ENST00000442216 COL16A1Q07092 1604 aaPredicted RBP21.46■■□□□ 1.03
CSNK1E-210ENST00000442216 EIF3AQ14152 1382 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-210ENST00000442216 QRICH2Q9H0J4 1663 aa21.44■■□□□ 1.02
CSNK1E-210ENST00000442216 KIF1AQ12756 1690 aa21.44■■□□□ 1.02
CSNK1E-210ENST00000442216 MINK1Q8N4C8 1332 aaPredicted RBP21.43■■□□□ 1.02
CSNK1E-210ENST00000442216 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
CSNK1E-210ENST00000442216 ORAI2Q96SN7 254 aa21.42■■□□□ 1.02
CSNK1E-210ENST00000442216 CENPJQ9HC77 1338 aaPredicted RBP21.42■■□□□ 1.02
CSNK1E-210ENST00000442216 USP32Q8NFA0 1604 aa21.41■■□□□ 1.02
CSNK1E-210ENST00000442216 TULP4Q9NRJ4 1543 aa21.41■■□□□ 1.02
CSNK1E-210ENST00000442216 WASLO00401 505 aaPredicted RBP21.41■■□□□ 1.02
CSNK1E-210ENST00000442216 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
CSNK1E-210ENST00000442216 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
CSNK1E-210ENST00000442216 ITSN1Q15811 1721 aa21.4■■□□□ 1.02
CSNK1E-210ENST00000442216 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.01
CSNK1E-210ENST00000442216 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
CSNK1E-210ENST00000442216 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
CSNK1E-210ENST00000442216 JCADQ9P266 1359 aa21.36■■□□□ 1.01
CSNK1E-210ENST00000442216 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
CSNK1E-210ENST00000442216 SOS2Q07890 1332 aaPredicted RBP21.35■■□□□ 1.01
CSNK1E-210ENST00000442216 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
CSNK1E-210ENST00000442216 SBNO2Q9Y2G9 1366 aa21.34■■□□□ 1.01
CSNK1E-210ENST00000442216 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
CSNK1E-210ENST00000442216 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
CSNK1E-210ENST00000442216 ATP7BP35670 1465 aa21.32■■□□□ 1
CSNK1E-210ENST00000442216 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
CSNK1E-210ENST00000442216 PXDNQ92626 1479 aa21.32■■□□□ 1
CSNK1E-210ENST00000442216 PRR36Q9H6K5 1346 aa21.31■■□□□ 1
CSNK1E-210ENST00000442216 FOXO3O43524 673 aa21.31■■□□□ 1
CSNK1E-210ENST00000442216 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
CSNK1E-210ENST00000442216 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
CSNK1E-210ENST00000442216 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
CSNK1E-210ENST00000442216 SPATA31A6Q5VVP1 1343 aa21.29■■□□□ 1
CSNK1E-210ENST00000442216 EVC2Q86UK5 1308 aa21.29■■□□□ 1
CSNK1E-210ENST00000442216 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
CSNK1E-210ENST00000442216 SLC24A1O60721 1099 aa21.26■□□□□ 0.99
CSNK1E-210ENST00000442216 COL22A1Q8NFW1 1626 aaPredicted RBP21.26■□□□□ 0.99
CSNK1E-210ENST00000442216 PNPLA6Q8IY17 1366 aa21.25■□□□□ 0.99
CSNK1E-210ENST00000442216 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
CSNK1E-210ENST00000442216 PSME1Q06323 249 aa21.25■□□□□ 0.99
CSNK1E-210ENST00000442216 KRT28Q7Z3Y7 464 aa21.24■□□□□ 0.99
CSNK1E-210ENST00000442216 PMFBP1Q8TBY8 1022 aa21.24■□□□□ 0.99
CSNK1E-210ENST00000442216 PLEKHG3A1L390 1219 aa21.23■□□□□ 0.99
CSNK1E-210ENST00000442216 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
CSNK1E-210ENST00000442216 SBNO1A3KN83 1393 aa21.23■□□□□ 0.99
CSNK1E-210ENST00000442216 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
CSNK1E-210ENST00000442216 POLR3AO14802 1390 aaPredicted RBP21.22■□□□□ 0.99
CSNK1E-210ENST00000442216 USP47Q96K76 1375 aa21.22■□□□□ 0.99
CSNK1E-210ENST00000442216 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
CSNK1E-210ENST00000442216 ST20-MTHFSA0A0A6YYL1 179 aa21.2■□□□□ 0.98
CSNK1E-210ENST00000442216 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
CSNK1E-210ENST00000442216 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
CSNK1E-210ENST00000442216 PPIP5K1Q6PFW1 1433 aa21.2■□□□□ 0.98
CSNK1E-210ENST00000442216 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
CSNK1E-210ENST00000442216 ATAD2Q6PL18 1390 aa21.19■□□□□ 0.98
CSNK1E-210ENST00000442216 TNS3Q68CZ2 1445 aa21.19■□□□□ 0.98
CSNK1E-210ENST00000442216 ALS2Q96Q42 1657 aa21.18■□□□□ 0.98
CSNK1E-210ENST00000442216 TESK2Q96S53 571 aa21.18■□□□□ 0.98
CSNK1E-210ENST00000442216 DISP3Q9P2K9 1392 aa21.18■□□□□ 0.98
CSNK1E-210ENST00000442216 LRP6O75581 1613 aa21.18■□□□□ 0.98
CSNK1E-210ENST00000442216 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
CSNK1E-210ENST00000442216 ACEP12821 1306 aa21.16■□□□□ 0.98
CSNK1E-210ENST00000442216 AKAP12Q02952 1782 aa21.15■□□□□ 0.98
CSNK1E-210ENST00000442216 MARF1Q9Y4F3 1742 aaKnown RBP21.15■□□□□ 0.98
CSNK1E-210ENST00000442216 BRD4O60885 1362 aaPredicted RBP21.15■□□□□ 0.98
CSNK1E-210ENST00000442216 CABP1Q9NZU7 370 aa21.14■□□□□ 0.97
CSNK1E-210ENST00000442216 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
CSNK1E-210ENST00000442216 NUTM2BA6NNL0 878 aaPredicted RBP21.11■□□□□ 0.97
CSNK1E-210ENST00000442216 NUTM2EB1AL46 878 aaPredicted RBP21.11■□□□□ 0.97
CSNK1E-210ENST00000442216 NUTM2AQ8IVF1 878 aaPredicted RBP21.11■□□□□ 0.97
CSNK1E-210ENST00000442216 ABCA3Q99758 1704 aa21.11■□□□□ 0.97
CSNK1E-210ENST00000442216 TMF1P82094 1093 aa21.1■□□□□ 0.97
CSNK1E-210ENST00000442216 MEX3CQ5U5Q3 659 aaKnown RBP21.1■□□□□ 0.97
CSNK1E-210ENST00000442216 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
CSNK1E-210ENST00000442216 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
CSNK1E-210ENST00000442216 USP6P35125 1406 aa21.08■□□□□ 0.97
CSNK1E-210ENST00000442216 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
CSNK1E-210ENST00000442216 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms