RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GMPR2Q9P2T1 348 aaKnown RBP8.33□□□□□ -1.08
HMGB3P9-201ENST00000441799 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P9-201ENST00000441799 MMP16P51512 607 aa8.32□□□□□ -1.08
HMGB3P9-201ENST00000441799 AXIN1O15169 862 aa8.31□□□□□ -1.08
HMGB3P9-201ENST00000441799 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
HMGB3P9-201ENST00000441799 WNT7AO00755 349 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 SMPD1P17405 629 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 TRIM32Q13049 653 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 HLA-CQ95604 372 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 DXOO77932 396 aaKnown RBP8.28□□□□□ -1.08
HMGB3P9-201ENST00000441799 Q3C1V9 767 aa8.28□□□□□ -1.08
HMGB3P9-201ENST00000441799 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 J3QL48 77 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 IRF6O14896 467 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 KDM4AO75164 1064 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P9-201ENST00000441799 SKOR1P84550 965 aa8.24□□□□□ -1.09
HMGB3P9-201ENST00000441799 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
HMGB3P9-201ENST00000441799 WFS1O76024 890 aa8.23□□□□□ -1.09
HMGB3P9-201ENST00000441799 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
HMGB3P9-201ENST00000441799 HOXA2O43364 376 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 SNRPBP14678 240 aaKnown RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 USP46P62068 366 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 HPS1Q92902 700 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
HMGB3P9-201ENST00000441799 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
HMGB3P9-201ENST00000441799 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
HMGB3P9-201ENST00000441799 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P9-201ENST00000441799 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
HMGB3P9-201ENST00000441799 WNT7BP56706 349 aa8.18□□□□□ -1.1
HMGB3P9-201ENST00000441799 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P9-201ENST00000441799 JUNDP17535 347 aa8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 TRIM47Q96LD4 638 aa8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 SIAH2O43255 324 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 WIPF1O43516 503 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.1
HMGB3P9-201ENST00000441799 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
HMGB3P9-201ENST00000441799 CLCN1P35523 988 aa8.14□□□□□ -1.11
HMGB3P9-201ENST00000441799 SENP2Q9HC62 589 aa8.14□□□□□ -1.11
HMGB3P9-201ENST00000441799 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
HMGB3P9-201ENST00000441799 RETREG3Q86VR2 466 aa8.13□□□□□ -1.11
HMGB3P9-201ENST00000441799 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
HMGB3P9-201ENST00000441799 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
HMGB3P9-201ENST00000441799 FDX1P10109 184 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 SH3BP2P78314 561 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 SPIRE2Q8WWL2 714 aa8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 NDUFV2P19404 249 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 CCNYL3P0C7X3 344 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 MS4A1P11836 297 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 BMP1P13497 986 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 CAPN5O15484 640 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 PTPRNQ16849 979 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 BAP1Q92560 729 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
HMGB3P9-201ENST00000441799 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
HMGB3P9-201ENST00000441799 ARXQ96QS3 562 aa8.01□□□□□ -1.13
HMGB3P9-201ENST00000441799 TLL2Q9Y6L7 1015 aa8.01□□□□□ -1.13
HMGB3P9-201ENST00000441799 GMPRP36959 345 aa8□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZNF511Q8NB15 262 aa8□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZMYND10O75800 440 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 VEGFBP49765 207 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 AMHR2Q16671 573 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 MPNDQ8N594 471 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZFP42Q96MM3 310 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms