RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PZPP20742 1482 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 VGLL3A8MV65 326 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 PPP6R1Q9UPN7 881 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 PDE3AQ14432 1141 aa9.38□□□□□ -0.91
HDAC9-214ENST00000441542 KDM5CP41229 1560 aa9.38□□□□□ -0.91
HDAC9-214ENST00000441542 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
HDAC9-214ENST00000441542 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-214ENST00000441542 C17orf53Q8N3J3 647 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-214ENST00000441542 TESK2Q96S53 571 aa9.37□□□□□ -0.91
HDAC9-214ENST00000441542 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
HDAC9-214ENST00000441542 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 TSPY4P0CV99 314 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 TSPY10P0CW01 314 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 ZNF692Q9BU19 519 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 CAMSAP2Q08AD1 1489 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 NLRP1Q9C000 1473 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 ZNF521Q96K83 1311 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
HDAC9-214ENST00000441542 TSR2Q969E8 191 aaKnown RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 CHMP4BQ9H444 224 aaKnown RBP9.36□□□□□ -0.91
HDAC9-214ENST00000441542 KIAA0586Q9BVV6 1533 aa9.35□□□□□ -0.91
HDAC9-214ENST00000441542 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
HDAC9-214ENST00000441542 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
HDAC9-214ENST00000441542 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
HDAC9-214ENST00000441542 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
HDAC9-214ENST00000441542 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
HDAC9-214ENST00000441542 SMC4Q9NTJ3 1288 aa9.35□□□□□ -0.91
HDAC9-214ENST00000441542 SKOR2Q2VWA4 1001 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-214ENST00000441542 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 PKP1Q13835 747 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 SYCE3A1L190 88 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 APBB1O00213 710 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
HDAC9-214ENST00000441542 MAP7D2Q96T17 732 aa9.34□□□□□ -0.91
HDAC9-214ENST00000441542 ANKRD50Q9ULJ7 1429 aa9.34□□□□□ -0.92
HDAC9-214ENST00000441542 ZBTB22O15209 634 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 RAB3GAP1Q15042 981 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
HDAC9-214ENST00000441542 TCOF1Q13428 1488 aaKnown RBP9.33□□□□□ -0.92
HDAC9-214ENST00000441542 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 SMAP1Q8IYB5 467 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-214ENST00000441542 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 ANKRD30AQ9BXX3 1397 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 GCC2Q8IWJ2 1684 aa9.33□□□□□ -0.92
HDAC9-214ENST00000441542 EPRSP07814 1512 aaKnown RBP9.32□□□□□ -0.92
HDAC9-214ENST00000441542 DZIP1LQ8IYY4 767 aaKnown RBP9.32□□□□□ -0.92
HDAC9-214ENST00000441542 PUS7Q96PZ0 661 aaKnown RBP9.32□□□□□ -0.92
HDAC9-214ENST00000441542 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
HDAC9-214ENST00000441542 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
HDAC9-214ENST00000441542 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
HDAC9-214ENST00000441542 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
HDAC9-214ENST00000441542 NUP160Q12769 1436 aa9.31□□□□□ -0.92
HDAC9-214ENST00000441542 CGNQ9P2M7 1197 aaKnown RBP9.31□□□□□ -0.92
HDAC9-214ENST00000441542 MAP3K4Q9Y6R4 1608 aa9.31□□□□□ -0.92
HDAC9-214ENST00000441542 PRG4Q92954 1404 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-214ENST00000441542 K7ELQ4 463 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-214ENST00000441542 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
HDAC9-214ENST00000441542 ZKSCAN2Q63HK3 967 aa9.31□□□□□ -0.92
HDAC9-214ENST00000441542 TRMT2AQ8IZ69 625 aaKnown RBP9.31□□□□□ -0.92
HDAC9-214ENST00000441542 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC9-214ENST00000441542 SASS6Q6UVJ0 657 aa9.3□□□□□ -0.92
HDAC9-214ENST00000441542 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
HDAC9-214ENST00000441542 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
HDAC9-214ENST00000441542 PLEKHH2Q8IVE3 1493 aa9.3□□□□□ -0.92
HDAC9-214ENST00000441542 NOL7Q9UMY1 257 aaKnown RBP9.3□□□□□ -0.92
HDAC9-214ENST00000441542 ZKSCAN5Q9Y2L8 839 aa9.3□□□□□ -0.92
HDAC9-214ENST00000441542 KIF14Q15058 1648 aa9.3□□□□□ -0.92
HDAC9-214ENST00000441542 SMC5Q8IY18 1101 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 IQSEC2Q5JU85 1478 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 DYNC1I1O14576 645 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 KLHL40Q2TBA0 621 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 ZNF771Q7L3S4 317 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 CCDC144AA2RUR9 1427 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
HDAC9-214ENST00000441542 LRRIQ1Q96JM4 1722 aa9.29□□□□□ -0.92
HDAC9-214ENST00000441542 EXOSC9Q06265 439 aaKnown RBP9.28□□□□□ -0.92
HDAC9-214ENST00000441542 ATP2B3Q16720 1220 aa9.28□□□□□ -0.92
HDAC9-214ENST00000441542 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
HDAC9-214ENST00000441542 TTC12Q9H892 705 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-214ENST00000441542 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-214ENST00000441542 DMTNQ08495 405 aa9.28□□□□□ -0.92
HDAC9-214ENST00000441542 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
HDAC9-214ENST00000441542 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
HDAC9-214ENST00000441542 NAP1L2Q9ULW6 460 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-214ENST00000441542 ELL2O00472 640 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms