RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 APAF1O14727 1248 aa24.76■■□□□ 1.55
LRCH3-207ENST00000441090 FAM69CQ0P6D2 419 aa24.76■■□□□ 1.55
LRCH3-207ENST00000441090 MORC1Q86VD1 984 aa24.76■■□□□ 1.55
LRCH3-207ENST00000441090 TRMT2AQ8IZ69 625 aaKnown RBP24.76■■□□□ 1.55
LRCH3-207ENST00000441090 NGEFQ8N5V2 710 aa24.76■■□□□ 1.55
LRCH3-207ENST00000441090 ANKRD36BQ8N2N9 1353 aa24.74■■□□□ 1.55
LRCH3-207ENST00000441090 CRBNQ96SW2 442 aa24.74■■□□□ 1.55
LRCH3-207ENST00000441090 AGLP35573 1532 aa24.73■■□□□ 1.55
LRCH3-207ENST00000441090 CGNL1Q0VF96 1302 aa24.73■■□□□ 1.55
LRCH3-207ENST00000441090 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
LRCH3-207ENST00000441090 NSD2O96028 1365 aa24.7■■□□□ 1.54
LRCH3-207ENST00000441090 PTPRMP28827 1452 aa24.7■■□□□ 1.54
LRCH3-207ENST00000441090 CLTCQ00610 1675 aaKnown RBP24.7■■□□□ 1.54
LRCH3-207ENST00000441090 NINLQ9Y2I6 1382 aa24.68■■□□□ 1.54
LRCH3-207ENST00000441090 C20orf194Q5TEA3 1177 aa24.68■■□□□ 1.54
LRCH3-207ENST00000441090 E9PSI1 815 aa24.67■■□□□ 1.54
LRCH3-207ENST00000441090 TCERG1O14776 1098 aaKnown RBP24.67■■□□□ 1.54
LRCH3-207ENST00000441090 FBXO31Q5XUX0 539 aaPredicted RBP24.67■■□□□ 1.54
LRCH3-207ENST00000441090 SPINK5Q9NQ38 1064 aaPredicted RBP24.67■■□□□ 1.54
LRCH3-207ENST00000441090 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
LRCH3-207ENST00000441090 ALKQ9UM73 1620 aa24.66■■□□□ 1.54
LRCH3-207ENST00000441090 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.66■■□□□ 1.54
LRCH3-207ENST00000441090 CABP2Q9NPB3 220 aa24.66■■□□□ 1.54
LRCH3-207ENST00000441090 YTHDC2Q9H6S0 1430 aaKnown RBP24.65■■□□□ 1.54
LRCH3-207ENST00000441090 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
LRCH3-207ENST00000441090 IQSEC2Q5JU85 1478 aa24.64■■□□□ 1.53
LRCH3-207ENST00000441090 STK26Q9P289 416 aa24.63■■□□□ 1.53
LRCH3-207ENST00000441090 SAFB2Q14151 953 aaKnown RBP eCLIP24.62■■□□□ 1.53
LRCH3-207ENST00000441090 SPATA31D1Q6ZQQ2 1576 aa24.62■■□□□ 1.53
LRCH3-207ENST00000441090 ANKRD26Q9UPS8 1709 aa24.62■■□□□ 1.53
LRCH3-207ENST00000441090 MTHFSP49914 203 aa24.61■■□□□ 1.53
LRCH3-207ENST00000441090 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
LRCH3-207ENST00000441090 ABCC11Q96J66 1382 aa24.61■■□□□ 1.53
LRCH3-207ENST00000441090 RUNDC1Q96C34 613 aa24.61■■□□□ 1.53
LRCH3-207ENST00000441090 WWC1Q8IX03 1113 aa24.6■■□□□ 1.53
LRCH3-207ENST00000441090 CFAP53Q96M91 514 aa24.6■■□□□ 1.53
LRCH3-207ENST00000441090 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
LRCH3-207ENST00000441090 ATAD2Q6PL18 1390 aa24.6■■□□□ 1.53
LRCH3-207ENST00000441090 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
LRCH3-207ENST00000441090 MS4A1P11836 297 aa24.59■■□□□ 1.53
LRCH3-207ENST00000441090 SRPK2P78362 688 aaKnown RBP24.58■■□□□ 1.53
LRCH3-207ENST00000441090 PRAM1Q96QH2 718 aa24.57■■□□□ 1.52
LRCH3-207ENST00000441090 SETD1AO15047 1707 aaKnown RBP24.57■■□□□ 1.52
LRCH3-207ENST00000441090 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
LRCH3-207ENST00000441090 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
LRCH3-207ENST00000441090 KDM2BQ8NHM5 1336 aa24.56■■□□□ 1.52
LRCH3-207ENST00000441090 STAG3Q9UJ98 1225 aa24.56■■□□□ 1.52
LRCH3-207ENST00000441090 ARHGEF40Q8TER5 1519 aa24.55■■□□□ 1.52
LRCH3-207ENST00000441090 CD163L1Q9NR16 1453 aa24.55■■□□□ 1.52
LRCH3-207ENST00000441090 KIF13AQ9H1H9 1805 aa24.55■■□□□ 1.52
LRCH3-207ENST00000441090 POGKQ9P215 609 aa24.55■■□□□ 1.52
LRCH3-207ENST00000441090 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
LRCH3-207ENST00000441090 PHF23Q9BUL5 403 aaPredicted RBP24.54■■□□□ 1.52
LRCH3-207ENST00000441090 ANP32AP39687 249 aaKnown RBP24.54■■□□□ 1.52
LRCH3-207ENST00000441090 DLC1Q96QB1 1528 aa24.54■■□□□ 1.52
LRCH3-207ENST00000441090 MED14O60244 1454 aa24.54■■□□□ 1.52
LRCH3-207ENST00000441090 TCP11L2Q8N4U5 519 aa24.53■■□□□ 1.52
LRCH3-207ENST00000441090 ADGRB2O60241 1585 aa24.52■■□□□ 1.52
LRCH3-207ENST00000441090 BCAR3O75815 825 aa24.51■■□□□ 1.51
LRCH3-207ENST00000441090 NCBP3Q53F19 620 aaKnown RBP24.51■■□□□ 1.51
LRCH3-207ENST00000441090 TERF2IPQ9NYB0 399 aa24.51■■□□□ 1.51
LRCH3-207ENST00000441090 KIF20BQ96Q89 1820 aa24.51■■□□□ 1.51
LRCH3-207ENST00000441090 PDE4AP27815 886 aa24.51■■□□□ 1.51
LRCH3-207ENST00000441090 CCDC27Q2M243 656 aa24.51■■□□□ 1.51
LRCH3-207ENST00000441090 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
LRCH3-207ENST00000441090 NLRP1Q9C000 1473 aa24.5■■□□□ 1.51
LRCH3-207ENST00000441090 RIMS2Q9UQ26 1411 aa24.5■■□□□ 1.51
LRCH3-207ENST00000441090 BACH2Q9BYV9 841 aa24.49■■□□□ 1.51
LRCH3-207ENST00000441090 WDR63Q8IWG1 891 aa24.49■■□□□ 1.51
LRCH3-207ENST00000441090 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
LRCH3-207ENST00000441090 NOP58Q9Y2X3 529 aaKnown RBP24.48■■□□□ 1.51
LRCH3-207ENST00000441090 COL3A1P02461 1466 aaPredicted RBP24.48■■□□□ 1.51
LRCH3-207ENST00000441090 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
LRCH3-207ENST00000441090 IPO9Q96P70 1041 aaKnown RBP24.47■■□□□ 1.51
LRCH3-207ENST00000441090 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
LRCH3-207ENST00000441090 GGNBP2Q9H3C7 697 aa24.45■■□□□ 1.51
LRCH3-207ENST00000441090 NRXN3Q9Y4C0 1643 aa24.45■■□□□ 1.51
LRCH3-207ENST00000441090 FYB1O15117 783 aa24.45■■□□□ 1.5
LRCH3-207ENST00000441090 U2AF1L5P0DN76 240 aaPredicted RBP24.44■■□□□ 1.5
LRCH3-207ENST00000441090 U2AF1Q01081 240 aaKnown RBP eCLIP24.44■■□□□ 1.52e-6■■■□□ 16.5
LRCH3-207ENST00000441090 PDE3AQ14432 1141 aa24.44■■□□□ 1.5
LRCH3-207ENST00000441090 HDGFL2Q7Z4V5 671 aaPredicted RBP24.44■■□□□ 1.5
LRCH3-207ENST00000441090 MLECQ14165 292 aa24.43■■□□□ 1.5
LRCH3-207ENST00000441090 SKAP1Q86WV1 359 aa24.41■■□□□ 1.5
LRCH3-207ENST00000441090 ATP7BP35670 1465 aa24.4■■□□□ 1.5
LRCH3-207ENST00000441090 CABP1Q9NZU7 370 aa24.39■■□□□ 1.5
LRCH3-207ENST00000441090 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.49
LRCH3-207ENST00000441090 PAK3O75914 559 aaPredicted RBP24.38■■□□□ 1.49
LRCH3-207ENST00000441090 ZMYM3Q14202 1370 aa24.38■■□□□ 1.49
LRCH3-207ENST00000441090 RARSP54136 660 aaKnown RBP24.37■■□□□ 1.49
LRCH3-207ENST00000441090 WAPLQ7Z5K2 1190 aa24.37■■□□□ 1.49
LRCH3-207ENST00000441090 PLEKHF1Q96S99 279 aa24.37■■□□□ 1.49
LRCH3-207ENST00000441090 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.36■■□□□ 1.49
LRCH3-207ENST00000441090 MYH16Q9H6N6 1097 aa24.36■■□□□ 1.49
LRCH3-207ENST00000441090 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
LRCH3-207ENST00000441090 CANXP27824 592 aaKnown RBP24.35■■□□□ 1.49
LRCH3-207ENST00000441090 ZBTB47Q9UFB7 747 aaPredicted RBP24.34■■□□□ 1.49
LRCH3-207ENST00000441090 U2SURPO15042 1029 aaKnown RBP24.34■■□□□ 1.49
LRCH3-207ENST00000441090 CDC42BPGQ6DT37 1551 aa24.33■■□□□ 1.49
LRCH3-207ENST00000441090 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms