RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 ZBTB7CA1YPR0 619 aa5.94□□□□□ -1.46
SCN3A-204ENST00000440431 SLIT1O75093 1534 aa5.94□□□□□ -1.46
SCN3A-204ENST00000440431 PRKRIP1Q9H875 184 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-204ENST00000440431 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-204ENST00000440431 USP32Q8NFA0 1604 aa5.93□□□□□ -1.46
SCN3A-204ENST00000440431 CALD1Q05682 793 aaKnown RBP5.93□□□□□ -1.46
SCN3A-204ENST00000440431 RPGRIP1LQ68CZ1 1315 aa5.93□□□□□ -1.46
SCN3A-204ENST00000440431 ADAMTS13Q76LX8 1427 aa5.93□□□□□ -1.46
SCN3A-204ENST00000440431 PARD3Q8TEW0 1356 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 A0A0G2JS52 829 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 CCER2I3L3R5 266 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 SLC52A1Q9NWF4 448 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 RIMS1Q86UR5 1692 aaKnown RBP5.92□□□□□ -1.46
SCN3A-204ENST00000440431 DLC1Q96QB1 1528 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 SHPRHQ149N8 1683 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 MORC1Q86VD1 984 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 NLRP1Q9C000 1473 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 CPS1P31327 1500 aa5.92□□□□□ -1.46
SCN3A-204ENST00000440431 TOPAZ1Q8N9V7 1692 aa5.91□□□□□ -1.46
SCN3A-204ENST00000440431 XRN1Q8IZH2 1706 aaKnown RBP5.91□□□□□ -1.46
SCN3A-204ENST00000440431 TECPR2O15040 1411 aa5.91□□□□□ -1.46
SCN3A-204ENST00000440431 PTPRUQ92729 1446 aa5.91□□□□□ -1.46
SCN3A-204ENST00000440431 CARD14Q9BXL6 1004 aa5.91□□□□□ -1.46
SCN3A-204ENST00000440431 PPM1GO15355 546 aaPredicted RBP5.9□□□□□ -1.46
SCN3A-204ENST00000440431 RALBP1Q15311 655 aa5.9□□□□□ -1.46
SCN3A-204ENST00000440431 METP08581 1390 aa5.9□□□□□ -1.46
SCN3A-204ENST00000440431 LRPPRCP42704 1394 aaKnown RBP5.9□□□□□ -1.46
SCN3A-204ENST00000440431 MARF1Q9Y4F3 1742 aaKnown RBP5.9□□□□□ -1.46
SCN3A-204ENST00000440431 TMEM132EQ6IEE7 984 aa5.9□□□□□ -1.46
SCN3A-204ENST00000440431 HDAC5Q9UQL6 1122 aa5.9□□□□□ -1.47
SCN3A-204ENST00000440431 RIMS2Q9UQ26 1411 aa5.9□□□□□ -1.47
SCN3A-204ENST00000440431 ADGRB2O60241 1585 aa5.9□□□□□ -1.47
SCN3A-204ENST00000440431 AMER1Q5JTC6 1135 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 NUTM2DQ5VT03 806 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 ANKRD26Q9UPS8 1709 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 NRKQ7Z2Y5 1582 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 ANP32AP39687 249 aaKnown RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 YTHDC2Q9H6S0 1430 aaKnown RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 PLEKHH1Q9ULM0 1364 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 STK26Q9P289 416 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 AKAP12Q02952 1782 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 KTN1Q86UP2 1357 aaKnown RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 LTKP29376 864 aa5.89□□□□□ -1.47
SCN3A-204ENST00000440431 CEBPAP49715 358 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 CEP170BQ9Y4F5 1589 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-204ENST00000440431 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
SCN3A-204ENST00000440431 RTF1Q92541 710 aaKnown RBP5.88□□□□□ -1.47
SCN3A-204ENST00000440431 CCDC136Q96JN2 1154 aa5.88□□□□□ -1.47
SCN3A-204ENST00000440431 TMEM2Q9UHN6 1383 aa5.88□□□□□ -1.47
SCN3A-204ENST00000440431 CHD2O14647 1828 aaKnown RBP5.88□□□□□ -1.47
SCN3A-204ENST00000440431 TNRQ92752 1358 aa5.88□□□□□ -1.47
SCN3A-204ENST00000440431 MON2Q7Z3U7 1717 aa5.88□□□□□ -1.47
SCN3A-204ENST00000440431 STRCP1A6NGW2 1772 aa5.87□□□□□ -1.47
SCN3A-204ENST00000440431 RGPD8O14715 1765 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-204ENST00000440431 EVC2Q86UK5 1308 aa5.87□□□□□ -1.47
SCN3A-204ENST00000440431 SALL2Q9Y467 1007 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-204ENST00000440431 U2SURPO15042 1029 aaKnown RBP5.87□□□□□ -1.47
SCN3A-204ENST00000440431 LMOD3Q0VAK6 560 aa5.87□□□□□ -1.47
SCN3A-204ENST00000440431 THEMISQ8N1K5 641 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-204ENST00000440431 CFAP44Q96MT7 982 aa5.87□□□□□ -1.47
SCN3A-204ENST00000440431 NPC1L1Q9UHC9 1359 aa5.86□□□□□ -1.47
SCN3A-204ENST00000440431 NGEFQ8N5V2 710 aa5.86□□□□□ -1.47
SCN3A-204ENST00000440431 PNISRQ8TF01 805 aaKnown RBP5.86□□□□□ -1.47
SCN3A-204ENST00000440431 SENP3Q9H4L4 574 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-204ENST00000440431 PANK3Q9H999 370 aa5.86□□□□□ -1.47
SCN3A-204ENST00000440431 ABCC11Q96J66 1382 aa5.86□□□□□ -1.47
SCN3A-204ENST00000440431 HSP90AA1P07900 732 aaKnown RBP5.86□□□□□ -1.47
SCN3A-204ENST00000440431 CSB-PGBD3P0DP91 1061 aa5.86□□□□□ -1.47
SCN3A-204ENST00000440431 NALCNQ8IZF0 1738 aa5.85□□□□□ -1.47
SCN3A-204ENST00000440431 KIF20BQ96Q89 1820 aa5.85□□□□□ -1.47
SCN3A-204ENST00000440431 PAK3O75914 559 aaPredicted RBP5.85□□□□□ -1.47
SCN3A-204ENST00000440431 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
SCN3A-204ENST00000440431 PLEKHG1Q9ULL1 1385 aa5.85□□□□□ -1.47
SCN3A-204ENST00000440431 IPO8O15397 1037 aaKnown RBP5.85□□□□□ -1.47
SCN3A-204ENST00000440431 ROBO2Q9HCK4 1378 aa5.85□□□□□ -1.47
SCN3A-204ENST00000440431 DIP2AQ14689 1571 aa5.85□□□□□ -1.47
SCN3A-204ENST00000440431 NPHP1O15259 732 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 PLEKHG5O94827 1062 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 HMGB2P26583 209 aaKnown RBP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 TRAK1Q9UPV9 953 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 COL3A1P02461 1466 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 SAFB2Q14151 953 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 USP54Q70EL1 1684 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 XIRP1Q702N8 1843 aaKnown RBP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 CASC1Q6TDU7 716 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 CENPJQ9HC77 1338 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 BLMP54132 1417 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-204ENST00000440431 FAM135BQ49AJ0 1406 aa5.84□□□□□ -1.47
SCN3A-204ENST00000440431 PUS7Q96PZ0 661 aaKnown RBP5.84□□□□□ -1.48
SCN3A-204ENST00000440431 CPSF1Q10570 1443 aaKnown RBP5.84□□□□□ -1.48
SCN3A-204ENST00000440431 NKTRP30414 1462 aaKnown RBP5.84□□□□□ -1.48
SCN3A-204ENST00000440431 ATP7BP35670 1465 aa5.84□□□□□ -1.48
SCN3A-204ENST00000440431 FKBP8Q14318 412 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 CC2D1BQ5T0F9 858 aaKnown RBP5.83□□□□□ -1.48
SCN3A-204ENST00000440431 ARXQ96QS3 562 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 STRCQ7RTU9 1775 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 CDC42BPGQ6DT37 1551 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 TSHZ2Q9NRE2 1034 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 NWD1Q149M9 1564 aa5.83□□□□□ -1.48
SCN3A-204ENST00000440431 SSH2Q76I76 1423 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms