RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 TRPC5Q9UL62 973 aaPredicted RBP21.04■□□□□ 0.96
SMC2-204ENST00000440179 PTCH1Q13635 1447 aa21.04■□□□□ 0.96
SMC2-204ENST00000440179 SPHKAPQ2M3C7 1700 aa21.02■□□□□ 0.96
SMC2-204ENST00000440179 ORAI2Q96SN7 254 aa21.02■□□□□ 0.96
SMC2-204ENST00000440179 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
SMC2-204ENST00000440179 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
SMC2-204ENST00000440179 COL22A1Q8NFW1 1626 aaPredicted RBP21■□□□□ 0.95
SMC2-204ENST00000440179 MYOM2P54296 1465 aa20.99■□□□□ 0.95
SMC2-204ENST00000440179 ROBO2Q9HCK4 1378 aa20.98■□□□□ 0.95
SMC2-204ENST00000440179 BCL9LQ86UU0 1499 aa20.97■□□□□ 0.95
SMC2-204ENST00000440179 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
SMC2-204ENST00000440179 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.94
SMC2-204ENST00000440179 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
SMC2-204ENST00000440179 PXDNQ92626 1479 aa20.91■□□□□ 0.94
SMC2-204ENST00000440179 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
SMC2-204ENST00000440179 GJD4Q96KN9 370 aaPredicted RBP20.89■□□□□ 0.93
SMC2-204ENST00000440179 NPHP3Q7Z494 1330 aa20.87■□□□□ 0.93
SMC2-204ENST00000440179 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
SMC2-204ENST00000440179 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
SMC2-204ENST00000440179 GLI3P10071 1580 aa20.85■□□□□ 0.93
SMC2-204ENST00000440179 CDC42BPGQ6DT37 1551 aa20.85■□□□□ 0.93
SMC2-204ENST00000440179 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.85■□□□□ 0.93
SMC2-204ENST00000440179 ITGAEP38570 1179 aa20.85■□□□□ 0.93
SMC2-204ENST00000440179 KIF1BO60333 1816 aa20.85■□□□□ 0.93
SMC2-204ENST00000440179 RALGAPBQ86X10 1494 aa20.84■□□□□ 0.93
SMC2-204ENST00000440179 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
SMC2-204ENST00000440179 ESCO1Q5FWF5 840 aa20.84■□□□□ 0.93
SMC2-204ENST00000440179 SLIT2O94813 1529 aa20.83■□□□□ 0.92
SMC2-204ENST00000440179 VGFO15240 615 aaPredicted RBP20.82■□□□□ 0.92
SMC2-204ENST00000440179 FOXO3O43524 673 aa20.82■□□□□ 0.92
SMC2-204ENST00000440179 DEFB132Q7Z7B7 95 aa20.82■□□□□ 0.92
SMC2-204ENST00000440179 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
SMC2-204ENST00000440179 BRWD3Q6RI45 1802 aa20.8■□□□□ 0.92
SMC2-204ENST00000440179 LRP5O75197 1615 aa20.79■□□□□ 0.92
SMC2-204ENST00000440179 NAIPQ13075 1403 aa20.77■□□□□ 0.91
SMC2-204ENST00000440179 PPLO60437 1756 aa20.75■□□□□ 0.91
SMC2-204ENST00000440179 RPGRIP1LQ68CZ1 1315 aa20.75■□□□□ 0.91
SMC2-204ENST00000440179 USP32Q8NFA0 1604 aa20.75■□□□□ 0.91
SMC2-204ENST00000440179 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
SMC2-204ENST00000440179 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
SMC2-204ENST00000440179 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
SMC2-204ENST00000440179 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
SMC2-204ENST00000440179 TECPR2O15040 1411 aa20.71■□□□□ 0.91
SMC2-204ENST00000440179 WAPLQ7Z5K2 1190 aa20.71■□□□□ 0.91
SMC2-204ENST00000440179 ONECUT3O60422 494 aaPredicted RBP20.69■□□□□ 0.9
SMC2-204ENST00000440179 SF3B2Q13435 895 aaKnown RBP20.69■□□□□ 0.9
SMC2-204ENST00000440179 VPS72Q15906 364 aa20.69■□□□□ 0.9
SMC2-204ENST00000440179 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
SMC2-204ENST00000440179 CCDC144AA2RUR9 1427 aa20.69■□□□□ 0.9
SMC2-204ENST00000440179 FMN2Q9NZ56 1722 aa20.68■□□□□ 0.9
SMC2-204ENST00000440179 KIF1AQ12756 1690 aa20.67■□□□□ 0.9
SMC2-204ENST00000440179 STK26Q9P289 416 aa20.67■□□□□ 0.9
SMC2-204ENST00000440179 ADGRF5Q8IZF2 1346 aa20.67■□□□□ 0.9
SMC2-204ENST00000440179 PSDA5PKW4 1024 aaPredicted RBP20.66■□□□□ 0.9
SMC2-204ENST00000440179 PLCH1Q4KWH8 1693 aa20.66■□□□□ 0.9
SMC2-204ENST00000440179 HRCP23327 699 aa20.65■□□□□ 0.9
SMC2-204ENST00000440179 KRT28Q7Z3Y7 464 aa20.65■□□□□ 0.9
SMC2-204ENST00000440179 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
SMC2-204ENST00000440179 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.9
SMC2-204ENST00000440179 TNS3Q68CZ2 1445 aa20.64■□□□□ 0.89
SMC2-204ENST00000440179 ABCC11Q96J66 1382 aa20.64■□□□□ 0.89
SMC2-204ENST00000440179 CABLES1Q8TDN4 633 aa20.64■□□□□ 0.89
SMC2-204ENST00000440179 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
SMC2-204ENST00000440179 KNDC1Q76NI1 1749 aa20.63■□□□□ 0.89
SMC2-204ENST00000440179 ABCA3Q99758 1704 aa20.62■□□□□ 0.89
SMC2-204ENST00000440179 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
SMC2-204ENST00000440179 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
SMC2-204ENST00000440179 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
SMC2-204ENST00000440179 BAG6P46379 1132 aa20.59■□□□□ 0.89
SMC2-204ENST00000440179 HAP1P54257 671 aaPredicted RBP20.59■□□□□ 0.89
SMC2-204ENST00000440179 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.89
SMC2-204ENST00000440179 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
SMC2-204ENST00000440179 FAM83GA6ND36 823 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 PLEKHG5O94827 1062 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 IFT172Q9UG01 1749 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 SBNO1A3KN83 1393 aa20.57■□□□□ 0.88
SMC2-204ENST00000440179 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
SMC2-204ENST00000440179 NRAPQ86VF7 1730 aa20.56■□□□□ 0.88
SMC2-204ENST00000440179 PIK3C2GO75747 1445 aa20.56■□□□□ 0.88
SMC2-204ENST00000440179 YTHDC2Q9H6S0 1430 aaKnown RBP20.56■□□□□ 0.88
SMC2-204ENST00000440179 EN1Q05925 392 aaPredicted RBP20.54■□□□□ 0.88
SMC2-204ENST00000440179 PSME1Q06323 249 aa20.54■□□□□ 0.88
SMC2-204ENST00000440179 FAM98CQ17RN3 349 aaKnown RBP20.54■□□□□ 0.88
SMC2-204ENST00000440179 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
SMC2-204ENST00000440179 ARHGEF10O15013 1369 aa20.54■□□□□ 0.88
SMC2-204ENST00000440179 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
SMC2-204ENST00000440179 A0A0G2JS52 829 aa20.53■□□□□ 0.88
SMC2-204ENST00000440179 MYT1Q01538 1121 aa20.53■□□□□ 0.88
SMC2-204ENST00000440179 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
SMC2-204ENST00000440179 R3HDM1Q15032 1099 aaKnown RBP20.52■□□□□ 0.88
SMC2-204ENST00000440179 SIRT1Q96EB6 747 aa20.52■□□□□ 0.88
SMC2-204ENST00000440179 RGPD1P0DJD0 1748 aa20.52■□□□□ 0.88
SMC2-204ENST00000440179 DISP2A7MBM2 1401 aa20.52■□□□□ 0.87
SMC2-204ENST00000440179 FAM182BQ5T319 152 aa20.51■□□□□ 0.87
SMC2-204ENST00000440179 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
SMC2-204ENST00000440179 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
SMC2-204ENST00000440179 TNS1Q9HBL0 1735 aaKnown RBP20.49■□□□□ 0.87
SMC2-204ENST00000440179 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms