RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 METP08581 1390 aa17.12■□□□□ 0.33
IRF1-204ENST00000439555 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
IRF1-204ENST00000439555 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
IRF1-204ENST00000439555 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
IRF1-204ENST00000439555 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
IRF1-204ENST00000439555 ATRNO75882 1429 aa17.11■□□□□ 0.33
IRF1-204ENST00000439555 KIF1BO60333 1816 aa17.07■□□□□ 0.32
IRF1-204ENST00000439555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.06■□□□□ 0.32
IRF1-204ENST00000439555 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
IRF1-204ENST00000439555 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
IRF1-204ENST00000439555 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
IRF1-204ENST00000439555 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
IRF1-204ENST00000439555 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
IRF1-204ENST00000439555 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.32
IRF1-204ENST00000439555 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
IRF1-204ENST00000439555 MYOM2P54296 1465 aa17.01■□□□□ 0.31
IRF1-204ENST00000439555 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
IRF1-204ENST00000439555 LRP5O75197 1615 aa17■□□□□ 0.31
IRF1-204ENST00000439555 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
IRF1-204ENST00000439555 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
IRF1-204ENST00000439555 HRCP23327 699 aa16.99■□□□□ 0.31
IRF1-204ENST00000439555 RGL3Q3MIN7 710 aa16.99■□□□□ 0.31
IRF1-204ENST00000439555 ROBO2Q9HCK4 1378 aa16.98■□□□□ 0.31
IRF1-204ENST00000439555 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
IRF1-204ENST00000439555 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
IRF1-204ENST00000439555 PXDNQ92626 1479 aa16.95■□□□□ 0.3
IRF1-204ENST00000439555 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
IRF1-204ENST00000439555 UNC5CLQ8IV45 518 aa16.95■□□□□ 0.3
IRF1-204ENST00000439555 GLI3P10071 1580 aa16.94■□□□□ 0.3
IRF1-204ENST00000439555 SLIT2O94813 1529 aa16.93■□□□□ 0.3
IRF1-204ENST00000439555 CDC42BPGQ6DT37 1551 aa16.93■□□□□ 0.3
IRF1-204ENST00000439555 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
IRF1-204ENST00000439555 ONECUT3O60422 494 aaPredicted RBP16.92■□□□□ 0.3
IRF1-204ENST00000439555 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
IRF1-204ENST00000439555 ESCO1Q5FWF5 840 aa16.92■□□□□ 0.3
IRF1-204ENST00000439555 TECPR2O15040 1411 aa16.92■□□□□ 0.3
IRF1-204ENST00000439555 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
IRF1-204ENST00000439555 PPLO60437 1756 aa16.92■□□□□ 0.3
IRF1-204ENST00000439555 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
IRF1-204ENST00000439555 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
IRF1-204ENST00000439555 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
IRF1-204ENST00000439555 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
IRF1-204ENST00000439555 FOXO3O43524 673 aa16.89■□□□□ 0.29
IRF1-204ENST00000439555 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
IRF1-204ENST00000439555 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
IRF1-204ENST00000439555 STK26Q9P289 416 aa16.87■□□□□ 0.29
IRF1-204ENST00000439555 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 KIF1AQ12756 1690 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 VPS72Q15906 364 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
IRF1-204ENST00000439555 WAPLQ7Z5K2 1190 aa16.85■□□□□ 0.29
IRF1-204ENST00000439555 SEPT12Q8IYM1 358 aa16.85■□□□□ 0.29
IRF1-204ENST00000439555 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
IRF1-204ENST00000439555 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
IRF1-204ENST00000439555 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.28
IRF1-204ENST00000439555 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
IRF1-204ENST00000439555 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
IRF1-204ENST00000439555 PLCH1Q4KWH8 1693 aa16.82■□□□□ 0.28
IRF1-204ENST00000439555 BAG6P46379 1132 aa16.82■□□□□ 0.28
IRF1-204ENST00000439555 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
IRF1-204ENST00000439555 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
IRF1-204ENST00000439555 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
IRF1-204ENST00000439555 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
IRF1-204ENST00000439555 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
IRF1-204ENST00000439555 PLEKHH1Q9ULM0 1364 aa16.79■□□□□ 0.28
IRF1-204ENST00000439555 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
IRF1-204ENST00000439555 PSME1Q06323 249 aa16.78■□□□□ 0.28
IRF1-204ENST00000439555 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
IRF1-204ENST00000439555 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
IRF1-204ENST00000439555 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
IRF1-204ENST00000439555 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
IRF1-204ENST00000439555 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
IRF1-204ENST00000439555 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
IRF1-204ENST00000439555 PSDA5PKW4 1024 aaPredicted RBP16.74■□□□□ 0.27
IRF1-204ENST00000439555 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
IRF1-204ENST00000439555 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
IRF1-204ENST00000439555 POGKQ9P215 609 aa16.73■□□□□ 0.27
IRF1-204ENST00000439555 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
IRF1-204ENST00000439555 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
IRF1-204ENST00000439555 DISP2A7MBM2 1401 aa16.72■□□□□ 0.27
IRF1-204ENST00000439555 CCDC9Q9Y3X0 531 aaKnown RBP16.72■□□□□ 0.27
IRF1-204ENST00000439555 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
IRF1-204ENST00000439555 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
IRF1-204ENST00000439555 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
IRF1-204ENST00000439555 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
IRF1-204ENST00000439555 EN1Q05925 392 aaPredicted RBP16.7■□□□□ 0.26
IRF1-204ENST00000439555 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
IRF1-204ENST00000439555 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
IRF1-204ENST00000439555 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
IRF1-204ENST00000439555 TRAK1Q9UPV9 953 aa16.69■□□□□ 0.26
IRF1-204ENST00000439555 SAFB2Q14151 953 aaKnown RBP eCLIP16.68■□□□□ 0.26
IRF1-204ENST00000439555 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
IRF1-204ENST00000439555 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
IRF1-204ENST00000439555 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
IRF1-204ENST00000439555 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
IRF1-204ENST00000439555 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
IRF1-204ENST00000439555 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
IRF1-204ENST00000439555 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms