RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 NRXN3Q9Y4C0 1643 aa14.89□□□□□ -0.03
CCDC66-207ENST00000439445 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
CCDC66-207ENST00000439445 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
CCDC66-207ENST00000439445 XRN1Q8IZH2 1706 aaKnown RBP14.88□□□□□ -0.03
CCDC66-207ENST00000439445 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
CCDC66-207ENST00000439445 MST1RQ04912 1400 aa14.86□□□□□ -0.03
CCDC66-207ENST00000439445 RXRBP28702 533 aa14.86□□□□□ -0.03
CCDC66-207ENST00000439445 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
CCDC66-207ENST00000439445 CLTCL1P53675 1640 aa14.85□□□□□ -0.03
CCDC66-207ENST00000439445 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
CCDC66-207ENST00000439445 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
CCDC66-207ENST00000439445 KIF1BO60333 1816 aa14.85□□□□□ -0.03
CCDC66-207ENST00000439445 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
CCDC66-207ENST00000439445 NEXMIFQ5QGS0 1516 aa14.84□□□□□ -0.03
CCDC66-207ENST00000439445 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
CCDC66-207ENST00000439445 NAIPQ13075 1403 aa14.83□□□□□ -0.03
CCDC66-207ENST00000439445 ADGRL3Q9HAR2 1447 aa14.83□□□□□ -0.03
CCDC66-207ENST00000439445 UPF1Q92900 1129 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCDC66-207ENST00000439445 AFF2P51816 1311 aa14.83□□□□□ -0.04
CCDC66-207ENST00000439445 NHSL1Q5SYE7 1610 aa14.82□□□□□ -0.04
CCDC66-207ENST00000439445 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
CCDC66-207ENST00000439445 NALCNQ8IZF0 1738 aa14.8□□□□□ -0.04
CCDC66-207ENST00000439445 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
CCDC66-207ENST00000439445 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
CCDC66-207ENST00000439445 QTRT2Q9H974 415 aaKnown RBP14.79□□□□□ -0.04
CCDC66-207ENST00000439445 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
CCDC66-207ENST00000439445 RPGRIP1LQ68CZ1 1315 aa14.78□□□□□ -0.04
CCDC66-207ENST00000439445 NGLY1Q96IV0 654 aa14.78□□□□□ -0.04
CCDC66-207ENST00000439445 ORAI2Q96SN7 254 aa14.78□□□□□ -0.04
CCDC66-207ENST00000439445 C1orf167Q5SNV9 1468 aa14.77□□□□□ -0.04
CCDC66-207ENST00000439445 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.04
CCDC66-207ENST00000439445 ADAMTS2O95450 1211 aa14.77□□□□□ -0.05
CCDC66-207ENST00000439445 RBM6P78332 1123 aaKnown RBP14.76□□□□□ -0.05
CCDC66-207ENST00000439445 CDK12Q9NYV4 1490 aaPredicted RBP14.76□□□□□ -0.05
CCDC66-207ENST00000439445 PTCH1Q13635 1447 aa14.75□□□□□ -0.05
CCDC66-207ENST00000439445 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
CCDC66-207ENST00000439445 SOS2Q07890 1332 aaPredicted RBP14.73□□□□□ -0.05
CCDC66-207ENST00000439445 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
CCDC66-207ENST00000439445 ESCO1Q5FWF5 840 aa14.72□□□□□ -0.05
CCDC66-207ENST00000439445 PPLO60437 1756 aa14.71□□□□□ -0.05
CCDC66-207ENST00000439445 STK26Q9P289 416 aa14.71□□□□□ -0.05
CCDC66-207ENST00000439445 LAMC1P11047 1609 aa14.7□□□□□ -0.06
CCDC66-207ENST00000439445 RGS12O14924 1447 aa14.7□□□□□ -0.06
CCDC66-207ENST00000439445 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
CCDC66-207ENST00000439445 USP21Q9UK80 565 aa14.7□□□□□ -0.06
CCDC66-207ENST00000439445 SRCAPQ6ZRS2 3230 aa14.7□□□□□ -0.06
CCDC66-207ENST00000439445 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
CCDC66-207ENST00000439445 PRAG1Q86YV5 1406 aa14.69□□□□□ -0.06
CCDC66-207ENST00000439445 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
CCDC66-207ENST00000439445 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
CCDC66-207ENST00000439445 FOXO3O43524 673 aa14.68□□□□□ -0.06
CCDC66-207ENST00000439445 WAPLQ7Z5K2 1190 aa14.68□□□□□ -0.06
CCDC66-207ENST00000439445 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
CCDC66-207ENST00000439445 XPCQ01831 940 aaPredicted RBP14.67□□□□□ -0.06
CCDC66-207ENST00000439445 FNBP4Q8N3X1 1017 aaPredicted RBP14.67□□□□□ -0.06
CCDC66-207ENST00000439445 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
CCDC66-207ENST00000439445 TMEM132EQ6IEE7 984 aa14.66□□□□□ -0.06
CCDC66-207ENST00000439445 MPHOSPH9Q99550 1183 aa14.66□□□□□ -0.06
CCDC66-207ENST00000439445 EP400Q96L91 3159 aa14.65□□□□□ -0.06
CCDC66-207ENST00000439445 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
CCDC66-207ENST00000439445 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
CCDC66-207ENST00000439445 CDC42BPGQ6DT37 1551 aa14.64□□□□□ -0.07
CCDC66-207ENST00000439445 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
CCDC66-207ENST00000439445 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
CCDC66-207ENST00000439445 SPATA31E1Q6ZUB1 1445 aa14.63□□□□□ -0.07
CCDC66-207ENST00000439445 COL22A1Q8NFW1 1626 aaPredicted RBP14.63□□□□□ -0.07
CCDC66-207ENST00000439445 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
CCDC66-207ENST00000439445 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
CCDC66-207ENST00000439445 PXDNQ92626 1479 aa14.62□□□□□ -0.07
CCDC66-207ENST00000439445 MYOM2P54296 1465 aa14.61□□□□□ -0.07
CCDC66-207ENST00000439445 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
CCDC66-207ENST00000439445 TECPR2O15040 1411 aa14.6□□□□□ -0.07
CCDC66-207ENST00000439445 ATRNO75882 1429 aa14.6□□□□□ -0.07
CCDC66-207ENST00000439445 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC66-207ENST00000439445 IFT172Q9UG01 1749 aa14.59□□□□□ -0.07
CCDC66-207ENST00000439445 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
CCDC66-207ENST00000439445 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.07
CCDC66-207ENST00000439445 BCL9LQ86UU0 1499 aa14.58□□□□□ -0.08
CCDC66-207ENST00000439445 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
CCDC66-207ENST00000439445 GJD4Q96KN9 370 aaPredicted RBP14.58□□□□□ -0.08
CCDC66-207ENST00000439445 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
CCDC66-207ENST00000439445 PIK3C2GO75747 1445 aa14.58□□□□□ -0.08
CCDC66-207ENST00000439445 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
CCDC66-207ENST00000439445 C14orf93Q9H972 538 aaKnown RBP14.57□□□□□ -0.08
CCDC66-207ENST00000439445 SPATA31A3Q5VYP0 1347 aa14.57□□□□□ -0.08
CCDC66-207ENST00000439445 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
CCDC66-207ENST00000439445 FMN2Q9NZ56 1722 aa14.56□□□□□ -0.08
CCDC66-207ENST00000439445 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
CCDC66-207ENST00000439445 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
CCDC66-207ENST00000439445 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
CCDC66-207ENST00000439445 SAFB2Q14151 953 aaKnown RBP eCLIP14.55□□□□□ -0.08
CCDC66-207ENST00000439445 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
CCDC66-207ENST00000439445 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
CCDC66-207ENST00000439445 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
CCDC66-207ENST00000439445 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
CCDC66-207ENST00000439445 PSME1Q06323 249 aa14.54□□□□□ -0.08
CCDC66-207ENST00000439445 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
CCDC66-207ENST00000439445 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
CCDC66-207ENST00000439445 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
CCDC66-207ENST00000439445 KIF1AQ12756 1690 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms