RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 UQCRHLA0A096LP55 91 aa19.74■□□□□ 0.75
DHFR-201ENST00000439211 UQCRHP07919 91 aa19.74■□□□□ 0.75
DHFR-201ENST00000439211 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
DHFR-201ENST00000439211 RUNDC1Q96C34 613 aa19.74■□□□□ 0.75
DHFR-201ENST00000439211 RWDD1Q9H446 243 aaPredicted RBP19.74■□□□□ 0.75
DHFR-201ENST00000439211 SMC4Q9NTJ3 1288 aa19.74■□□□□ 0.75
DHFR-201ENST00000439211 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
DHFR-201ENST00000439211 ITPRIPQ8IWB1 547 aa19.74■□□□□ 0.75
DHFR-201ENST00000439211 PLCD3Q8N3E9 789 aa19.73■□□□□ 0.75
DHFR-201ENST00000439211 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
DHFR-201ENST00000439211 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
DHFR-201ENST00000439211 DDX11L8A8MPP1 907 aa19.73■□□□□ 0.75
DHFR-201ENST00000439211 MTERF4Q7Z6M4 381 aaKnown RBP19.73■□□□□ 0.75
DHFR-201ENST00000439211 MAGI2Q86UL8 1455 aa19.72■□□□□ 0.75
DHFR-201ENST00000439211 CARD14Q9BXL6 1004 aa19.72■□□□□ 0.75
DHFR-201ENST00000439211 MFAP1P55081 439 aaKnown RBP19.71■□□□□ 0.75
DHFR-201ENST00000439211 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
DHFR-201ENST00000439211 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
DHFR-201ENST00000439211 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
DHFR-201ENST00000439211 SMAP1Q8IYB5 467 aaPredicted RBP19.71■□□□□ 0.75
DHFR-201ENST00000439211 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
DHFR-201ENST00000439211 PTMAP06454 111 aaKnown RBP19.7■□□□□ 0.74
DHFR-201ENST00000439211 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
DHFR-201ENST00000439211 GOLGA6L22H0YM25 854 aa19.7■□□□□ 0.74
DHFR-201ENST00000439211 PAXIP1Q6ZW49 1069 aaPredicted RBP19.7■□□□□ 0.74
DHFR-201ENST00000439211 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 HSCBQ8IWL3 235 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 DUOX2Q9NRD8 1548 aa19.69■□□□□ 0.74
DHFR-201ENST00000439211 ZMYM4Q5VZL5 1548 aa19.68■□□□□ 0.74
DHFR-201ENST00000439211 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
DHFR-201ENST00000439211 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
DHFR-201ENST00000439211 PLCH2O75038 1416 aa19.68■□□□□ 0.74
DHFR-201ENST00000439211 TAF7LQ5H9L4 462 aa19.68■□□□□ 0.74
DHFR-201ENST00000439211 VGLL3A8MV65 326 aa19.67■□□□□ 0.74
DHFR-201ENST00000439211 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
DHFR-201ENST00000439211 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
DHFR-201ENST00000439211 NASPP49321 788 aaPredicted RBP19.67■□□□□ 0.74
DHFR-201ENST00000439211 GGNBP2Q9H3C7 697 aa19.67■□□□□ 0.74
DHFR-201ENST00000439211 TNNQ9UQP3 1299 aa19.67■□□□□ 0.74
DHFR-201ENST00000439211 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
DHFR-201ENST00000439211 PDZRN3Q9UPQ7 1066 aa19.66■□□□□ 0.74
DHFR-201ENST00000439211 GBP4Q96PP9 640 aa19.66■□□□□ 0.74
DHFR-201ENST00000439211 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
DHFR-201ENST00000439211 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
DHFR-201ENST00000439211 RARSP54136 660 aaKnown RBP19.64■□□□□ 0.73
DHFR-201ENST00000439211 TRPM1Q7Z4N2 1603 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
DHFR-201ENST00000439211 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 SEC24BO95487 1268 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 HSP90AB1P08238 724 aaKnown RBP19.63■□□□□ 0.73
DHFR-201ENST00000439211 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 CBX1P83916 185 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
DHFR-201ENST00000439211 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
DHFR-201ENST00000439211 EIF2AK4Q9P2K8 1649 aaKnown RBP19.63■□□□□ 0.73
DHFR-201ENST00000439211 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
DHFR-201ENST00000439211 MINK1Q8N4C8 1332 aaPredicted RBP19.62■□□□□ 0.73
DHFR-201ENST00000439211 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
DHFR-201ENST00000439211 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
DHFR-201ENST00000439211 OFD1O75665 1012 aa19.62■□□□□ 0.73
DHFR-201ENST00000439211 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
DHFR-201ENST00000439211 ISY1Q9ULR0 285 aaKnown RBP19.61■□□□□ 0.73
DHFR-201ENST00000439211 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
DHFR-201ENST00000439211 TBC1D2Q9BYX2 928 aa19.61■□□□□ 0.73
DHFR-201ENST00000439211 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
DHFR-201ENST00000439211 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
DHFR-201ENST00000439211 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
DHFR-201ENST00000439211 PRDM15P57071 1507 aaPredicted RBP19.6■□□□□ 0.73
DHFR-201ENST00000439211 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
DHFR-201ENST00000439211 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
DHFR-201ENST00000439211 ZNF771Q7L3S4 317 aaPredicted RBP19.59■□□□□ 0.73
DHFR-201ENST00000439211 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
DHFR-201ENST00000439211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.59■□□□□ 0.73
DHFR-201ENST00000439211 RLBP1P12271 317 aa19.59■□□□□ 0.73
DHFR-201ENST00000439211 PPP4R3BQ5MIZ7 849 aa19.59■□□□□ 0.73
DHFR-201ENST00000439211 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
DHFR-201ENST00000439211 VGFO15240 615 aaPredicted RBP19.58■□□□□ 0.72
DHFR-201ENST00000439211 RIPK4P57078 832 aa19.57■□□□□ 0.72
DHFR-201ENST00000439211 MLECQ14165 292 aa19.57■□□□□ 0.72
DHFR-201ENST00000439211 INSRP06213 1382 aa19.57■□□□□ 0.72
DHFR-201ENST00000439211 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
DHFR-201ENST00000439211 DDX49Q9Y6V7 483 aaKnown RBP19.57■□□□□ 0.72
DHFR-201ENST00000439211 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
DHFR-201ENST00000439211 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
DHFR-201ENST00000439211 FANCAO15360 1455 aa19.56■□□□□ 0.72
DHFR-201ENST00000439211 MAST1Q9Y2H9 1570 aa19.56■□□□□ 0.72
DHFR-201ENST00000439211 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
DHFR-201ENST00000439211 NOS1P29475 1434 aa19.55■□□□□ 0.72
DHFR-201ENST00000439211 CSPP1Q1MSJ5 1256 aa19.55■□□□□ 0.72
DHFR-201ENST00000439211 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
DHFR-201ENST00000439211 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
DHFR-201ENST00000439211 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
DHFR-201ENST00000439211 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
DHFR-201ENST00000439211 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
DHFR-201ENST00000439211 TERF2IPQ9NYB0 399 aa19.54■□□□□ 0.72
DHFR-201ENST00000439211 CHD1O14646 1710 aa19.54■□□□□ 0.72
DHFR-201ENST00000439211 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms