RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 E9PSI1 815 aa15.86■□□□□ 0.13
HDAC8-214ENST00000439122 STK26Q9P289 416 aa15.86■□□□□ 0.13
HDAC8-214ENST00000439122 ARHGEF28Q8N1W1 1705 aaKnown RBP15.86■□□□□ 0.13
HDAC8-214ENST00000439122 NKTRP30414 1462 aaKnown RBP15.86■□□□□ 0.13
HDAC8-214ENST00000439122 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
HDAC8-214ENST00000439122 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
HDAC8-214ENST00000439122 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
HDAC8-214ENST00000439122 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
HDAC8-214ENST00000439122 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
HDAC8-214ENST00000439122 MTHFSP49914 203 aa15.84■□□□□ 0.13
HDAC8-214ENST00000439122 PUS7Q96PZ0 661 aaKnown RBP15.84■□□□□ 0.13
HDAC8-214ENST00000439122 PDE4AP27815 886 aa15.83■□□□□ 0.12
HDAC8-214ENST00000439122 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
HDAC8-214ENST00000439122 ANKRD36BQ8N2N9 1353 aa15.83■□□□□ 0.12
HDAC8-214ENST00000439122 MS4A1P11836 297 aa15.83■□□□□ 0.12
HDAC8-214ENST00000439122 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
HDAC8-214ENST00000439122 IPO9Q96P70 1041 aaKnown RBP15.83■□□□□ 0.12
HDAC8-214ENST00000439122 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 MYO5BQ9ULV0 1848 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 PREX1Q8TCU6 1659 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 BCAR3O75815 825 aa15.82■□□□□ 0.12
HDAC8-214ENST00000439122 SRPK2P78362 688 aaKnown RBP15.82■□□□□ 0.12
HDAC8-214ENST00000439122 FBXO31Q5XUX0 539 aaPredicted RBP15.82■□□□□ 0.12
HDAC8-214ENST00000439122 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
HDAC8-214ENST00000439122 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
HDAC8-214ENST00000439122 SHPRHQ149N8 1683 aa15.81■□□□□ 0.12
HDAC8-214ENST00000439122 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
HDAC8-214ENST00000439122 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
HDAC8-214ENST00000439122 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
HDAC8-214ENST00000439122 TMEM131LA2VDJ0 1609 aa15.8■□□□□ 0.12
HDAC8-214ENST00000439122 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
HDAC8-214ENST00000439122 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
HDAC8-214ENST00000439122 KDM2BQ8NHM5 1336 aa15.79■□□□□ 0.12
HDAC8-214ENST00000439122 CENPQQ7L2Z9 268 aaPredicted RBP15.79■□□□□ 0.12
HDAC8-214ENST00000439122 NSD2O96028 1365 aa15.78■□□□□ 0.12
HDAC8-214ENST00000439122 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
HDAC8-214ENST00000439122 POGKQ9P215 609 aa15.78■□□□□ 0.12
HDAC8-214ENST00000439122 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
HDAC8-214ENST00000439122 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-214ENST00000439122 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-214ENST00000439122 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
HDAC8-214ENST00000439122 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
HDAC8-214ENST00000439122 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
HDAC8-214ENST00000439122 PTPRMP28827 1452 aa15.75■□□□□ 0.11
HDAC8-214ENST00000439122 YTHDC2Q9H6S0 1430 aaKnown RBP15.75■□□□□ 0.11
HDAC8-214ENST00000439122 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-214ENST00000439122 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC8-214ENST00000439122 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
HDAC8-214ENST00000439122 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 ATAD2Q6PL18 1390 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 IQSEC2Q5JU85 1478 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 DIP2BQ9P265 1576 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 TERF2IPQ9NYB0 399 aa15.73■□□□□ 0.11
HDAC8-214ENST00000439122 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
HDAC8-214ENST00000439122 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
HDAC8-214ENST00000439122 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
HDAC8-214ENST00000439122 WDR63Q8IWG1 891 aa15.72■□□□□ 0.11
HDAC8-214ENST00000439122 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-214ENST00000439122 MLECQ14165 292 aa15.71■□□□□ 0.1
HDAC8-214ENST00000439122 PDE3AQ14432 1141 aa15.71■□□□□ 0.1
HDAC8-214ENST00000439122 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.1
HDAC8-214ENST00000439122 ALKQ9UM73 1620 aa15.71■□□□□ 0.1
HDAC8-214ENST00000439122 CCDC27Q2M243 656 aa15.7■□□□□ 0.1
HDAC8-214ENST00000439122 NBR1Q14596 966 aa15.69■□□□□ 0.1
HDAC8-214ENST00000439122 CDK19Q9BWU1 502 aa15.69■□□□□ 0.1
HDAC8-214ENST00000439122 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
HDAC8-214ENST00000439122 FYB1O15117 783 aa15.69■□□□□ 0.1
HDAC8-214ENST00000439122 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
HDAC8-214ENST00000439122 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
HDAC8-214ENST00000439122 COG6Q9Y2V7 657 aa15.68■□□□□ 0.1
HDAC8-214ENST00000439122 CLTCQ00610 1675 aaKnown RBP15.68■□□□□ 0.1
HDAC8-214ENST00000439122 RARSP54136 660 aaKnown RBP15.68■□□□□ 0.1
HDAC8-214ENST00000439122 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-214ENST00000439122 RGS3P49796 1198 aa15.67■□□□□ 0.1
HDAC8-214ENST00000439122 CABP1Q9NZU7 370 aa15.67■□□□□ 0.1
HDAC8-214ENST00000439122 MYH16Q9H6N6 1097 aa15.67■□□□□ 0.1
HDAC8-214ENST00000439122 CD163L1Q9NR16 1453 aa15.67■□□□□ 0.1
HDAC8-214ENST00000439122 AGLP35573 1532 aa15.67■□□□□ 0.1
HDAC8-214ENST00000439122 REREQ9P2R6 1566 aa15.66■□□□□ 0.1
HDAC8-214ENST00000439122 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
HDAC8-214ENST00000439122 WAPLQ7Z5K2 1190 aa15.65■□□□□ 0.1
HDAC8-214ENST00000439122 CLUAP1Q96AJ1 413 aa15.65■□□□□ 0.1
HDAC8-214ENST00000439122 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
HDAC8-214ENST00000439122 A2ML1A8K2U0 1454 aa15.65■□□□□ 0.1
HDAC8-214ENST00000439122 IGHDP01880 384 aa15.65■□□□□ 0.1
HDAC8-214ENST00000439122 FAM161AQ3B820 660 aa15.64■□□□□ 0.09
HDAC8-214ENST00000439122 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
HDAC8-214ENST00000439122 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
HDAC8-214ENST00000439122 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
HDAC8-214ENST00000439122 PLEKHF1Q96S99 279 aa15.63■□□□□ 0.09
HDAC8-214ENST00000439122 MED14O60244 1454 aa15.63■□□□□ 0.09
HDAC8-214ENST00000439122 NLRP1Q9C000 1473 aa15.63■□□□□ 0.09
HDAC8-214ENST00000439122 SPATA31D1Q6ZQQ2 1576 aa15.63■□□□□ 0.09
HDAC8-214ENST00000439122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
HDAC8-214ENST00000439122 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
HDAC8-214ENST00000439122 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms