RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MST1RQ04912 1400 aa13.69□□□□□ -0.22
AC011228.1-201ENST00000439027 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
AC011228.1-201ENST00000439027 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
AC011228.1-201ENST00000439027 LRP6O75581 1613 aa13.68□□□□□ -0.22
AC011228.1-201ENST00000439027 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
AC011228.1-201ENST00000439027 ASXL1Q8IXJ9 1541 aa13.67□□□□□ -0.22
AC011228.1-201ENST00000439027 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
AC011228.1-201ENST00000439027 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
AC011228.1-201ENST00000439027 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
AC011228.1-201ENST00000439027 STK26Q9P289 416 aa13.64□□□□□ -0.23
AC011228.1-201ENST00000439027 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
AC011228.1-201ENST00000439027 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 RXRBP28702 533 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 AFF2P51816 1311 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
AC011228.1-201ENST00000439027 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
AC011228.1-201ENST00000439027 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
AC011228.1-201ENST00000439027 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
AC011228.1-201ENST00000439027 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
AC011228.1-201ENST00000439027 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
AC011228.1-201ENST00000439027 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
AC011228.1-201ENST00000439027 PPLO60437 1756 aa13.59□□□□□ -0.23
AC011228.1-201ENST00000439027 ESCO1Q5FWF5 840 aa13.59□□□□□ -0.23
AC011228.1-201ENST00000439027 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
AC011228.1-201ENST00000439027 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
AC011228.1-201ENST00000439027 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.23
AC011228.1-201ENST00000439027 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.24
AC011228.1-201ENST00000439027 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
AC011228.1-201ENST00000439027 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
AC011228.1-201ENST00000439027 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
AC011228.1-201ENST00000439027 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
AC011228.1-201ENST00000439027 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
AC011228.1-201ENST00000439027 SOS2Q07890 1332 aaPredicted RBP13.56□□□□□ -0.24
AC011228.1-201ENST00000439027 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
AC011228.1-201ENST00000439027 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
AC011228.1-201ENST00000439027 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
AC011228.1-201ENST00000439027 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
AC011228.1-201ENST00000439027 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
AC011228.1-201ENST00000439027 FOXO3O43524 673 aa13.54□□□□□ -0.24
AC011228.1-201ENST00000439027 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
AC011228.1-201ENST00000439027 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
AC011228.1-201ENST00000439027 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
AC011228.1-201ENST00000439027 USP21Q9UK80 565 aa13.52□□□□□ -0.25
AC011228.1-201ENST00000439027 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
AC011228.1-201ENST00000439027 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
AC011228.1-201ENST00000439027 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
AC011228.1-201ENST00000439027 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
AC011228.1-201ENST00000439027 TECPR2O15040 1411 aa13.5□□□□□ -0.25
AC011228.1-201ENST00000439027 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
AC011228.1-201ENST00000439027 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
AC011228.1-201ENST00000439027 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
AC011228.1-201ENST00000439027 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
AC011228.1-201ENST00000439027 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
AC011228.1-201ENST00000439027 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
AC011228.1-201ENST00000439027 LAMC1P11047 1609 aa13.49□□□□□ -0.25
AC011228.1-201ENST00000439027 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
AC011228.1-201ENST00000439027 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
AC011228.1-201ENST00000439027 POGKQ9P215 609 aa13.48□□□□□ -0.25
AC011228.1-201ENST00000439027 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 KDM2AQ9Y2K7 1162 aa13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 RGS12O14924 1447 aa13.47□□□□□ -0.25
AC011228.1-201ENST00000439027 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
AC011228.1-201ENST00000439027 PXDNQ92626 1479 aa13.46□□□□□ -0.25
AC011228.1-201ENST00000439027 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
AC011228.1-201ENST00000439027 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
AC011228.1-201ENST00000439027 MYOM2P54296 1465 aa13.44□□□□□ -0.26
AC011228.1-201ENST00000439027 PSME1Q06323 249 aa13.44□□□□□ -0.26
AC011228.1-201ENST00000439027 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
AC011228.1-201ENST00000439027 SPATA31A3Q5VYP0 1347 aa13.43□□□□□ -0.26
AC011228.1-201ENST00000439027 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
AC011228.1-201ENST00000439027 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
AC011228.1-201ENST00000439027 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
AC011228.1-201ENST00000439027 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
AC011228.1-201ENST00000439027 ATRNO75882 1429 aa13.42□□□□□ -0.26
AC011228.1-201ENST00000439027 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
AC011228.1-201ENST00000439027 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
AC011228.1-201ENST00000439027 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
AC011228.1-201ENST00000439027 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
AC011228.1-201ENST00000439027 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
AC011228.1-201ENST00000439027 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
AC011228.1-201ENST00000439027 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
AC011228.1-201ENST00000439027 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
AC011228.1-201ENST00000439027 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
AC011228.1-201ENST00000439027 UNC5CLQ8IV45 518 aa13.39□□□□□ -0.27
AC011228.1-201ENST00000439027 BCL9LQ86UU0 1499 aa13.39□□□□□ -0.27
AC011228.1-201ENST00000439027 KIF1AQ12756 1690 aa13.38□□□□□ -0.27
AC011228.1-201ENST00000439027 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
AC011228.1-201ENST00000439027 HRCP23327 699 aa13.37□□□□□ -0.27
AC011228.1-201ENST00000439027 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
AC011228.1-201ENST00000439027 SBNO1A3KN83 1393 aa13.36□□□□□ -0.27
AC011228.1-201ENST00000439027 RGPD8O14715 1765 aaPredicted RBP13.36□□□□□ -0.27
AC011228.1-201ENST00000439027 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
AC011228.1-201ENST00000439027 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms