RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
ACTN1-204ENST00000438964 ZKSCAN2Q63HK3 967 aa16.8■□□□□ 0.28
ACTN1-204ENST00000438964 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
ACTN1-204ENST00000438964 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-204ENST00000438964 MPNDQ8N594 471 aa16.79■□□□□ 0.28
ACTN1-204ENST00000438964 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
ACTN1-204ENST00000438964 CHGAP10645 457 aaKnown RBP16.79■□□□□ 0.28
ACTN1-204ENST00000438964 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-204ENST00000438964 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-204ENST00000438964 SHANK2Q9UPX8 1470 aa16.78■□□□□ 0.28
ACTN1-204ENST00000438964 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
ACTN1-204ENST00000438964 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-204ENST00000438964 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
ACTN1-204ENST00000438964 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
ACTN1-204ENST00000438964 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
ACTN1-204ENST00000438964 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.28
ACTN1-204ENST00000438964 SSH1Q8WYL5 1049 aa16.77■□□□□ 0.28
ACTN1-204ENST00000438964 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
ACTN1-204ENST00000438964 SYCP2Q9BX26 1530 aa16.77■□□□□ 0.28
ACTN1-204ENST00000438964 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.27
ACTN1-204ENST00000438964 SAFB2Q14151 953 aaKnown RBP eCLIP16.76■□□□□ 0.27
ACTN1-204ENST00000438964 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
ACTN1-204ENST00000438964 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
ACTN1-204ENST00000438964 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
ACTN1-204ENST00000438964 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
ACTN1-204ENST00000438964 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
ACTN1-204ENST00000438964 PKP1Q13835 747 aa16.75■□□□□ 0.27
ACTN1-204ENST00000438964 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
ACTN1-204ENST00000438964 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
ACTN1-204ENST00000438964 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
ACTN1-204ENST00000438964 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
ACTN1-204ENST00000438964 RIPK4P57078 832 aa16.74■□□□□ 0.27
ACTN1-204ENST00000438964 ANKRD45Q5TZF3 282 aa16.74■□□□□ 0.27
ACTN1-204ENST00000438964 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
ACTN1-204ENST00000438964 JARID2Q92833 1246 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-204ENST00000438964 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
ACTN1-204ENST00000438964 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
ACTN1-204ENST00000438964 RBM27Q9P2N5 1060 aaKnown RBP16.73■□□□□ 0.27
ACTN1-204ENST00000438964 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
ACTN1-204ENST00000438964 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
ACTN1-204ENST00000438964 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-204ENST00000438964 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
ACTN1-204ENST00000438964 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
ACTN1-204ENST00000438964 DDIT3P35638 169 aa16.71■□□□□ 0.27
ACTN1-204ENST00000438964 KIF2CQ99661 725 aa16.71■□□□□ 0.27
ACTN1-204ENST00000438964 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-204ENST00000438964 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
ACTN1-204ENST00000438964 PDCL3Q9H2J4 239 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 ZSCAN30Q86W11 494 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 TPM2P07951 284 aa16.7■□□□□ 0.26
ACTN1-204ENST00000438964 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
ACTN1-204ENST00000438964 APBB1O00213 710 aa16.69■□□□□ 0.26
ACTN1-204ENST00000438964 FOXD4L6Q3SYB3 417 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-204ENST00000438964 FOXD4L3Q6VB84 417 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-204ENST00000438964 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
ACTN1-204ENST00000438964 EIF2AK4Q9P2K8 1649 aaKnown RBP16.69■□□□□ 0.26
ACTN1-204ENST00000438964 SYNMO15061 1565 aa16.69■□□□□ 0.26
ACTN1-204ENST00000438964 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
ACTN1-204ENST00000438964 MYOM1P52179 1685 aa16.68■□□□□ 0.26
ACTN1-204ENST00000438964 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
ACTN1-204ENST00000438964 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
ACTN1-204ENST00000438964 TSC1Q92574 1164 aa16.68■□□□□ 0.26
ACTN1-204ENST00000438964 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
ACTN1-204ENST00000438964 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
ACTN1-204ENST00000438964 K7ELQ4 463 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-204ENST00000438964 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
ACTN1-204ENST00000438964 TBC1D9Q6ZT07 1266 aa16.67■□□□□ 0.26
ACTN1-204ENST00000438964 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
ACTN1-204ENST00000438964 RBSNQ9H1K0 784 aa16.67■□□□□ 0.26
ACTN1-204ENST00000438964 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
ACTN1-204ENST00000438964 NUP160Q12769 1436 aa16.66■□□□□ 0.26
ACTN1-204ENST00000438964 ERVK-7P63135 1459 aa16.66■□□□□ 0.26
ACTN1-204ENST00000438964 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
ACTN1-204ENST00000438964 UQCRHP07919 91 aa16.66■□□□□ 0.26
ACTN1-204ENST00000438964 RBM25P49756 843 aaKnown RBP16.66■□□□□ 0.26
ACTN1-204ENST00000438964 ZHX1Q9UKY1 873 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-204ENST00000438964 FBLN1P23142 703 aa16.65■□□□□ 0.26
ACTN1-204ENST00000438964 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
ACTN1-204ENST00000438964 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-204ENST00000438964 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
ACTN1-204ENST00000438964 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
ACTN1-204ENST00000438964 OFD1O75665 1012 aa16.64■□□□□ 0.26
ACTN1-204ENST00000438964 ABCA8O94911 1581 aa16.64■□□□□ 0.25
ACTN1-204ENST00000438964 CDC42BPBQ9Y5S2 1711 aa16.64■□□□□ 0.25
ACTN1-204ENST00000438964 LAMC1P11047 1609 aa16.64■□□□□ 0.25
ACTN1-204ENST00000438964 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
ACTN1-204ENST00000438964 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
ACTN1-204ENST00000438964 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
ACTN1-204ENST00000438964 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-204ENST00000438964 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 NUCB1Q02818 461 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 GGNBP2Q9H3C7 697 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
ACTN1-204ENST00000438964 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms