RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
LINC01649-201ENST00000438885 SCUBE3Q8IX30 993 aa8.02□□□□□ -1.13
LINC01649-201ENST00000438885 SLC10A3P09131 477 aa8.01□□□□□ -1.13
LINC01649-201ENST00000438885 FCF1Q9Y324 198 aaKnown RBP8□□□□□ -1.13
LINC01649-201ENST00000438885 FCHSD2O94868 740 aa8□□□□□ -1.13
LINC01649-201ENST00000438885 OATP04181 439 aa8□□□□□ -1.13
LINC01649-201ENST00000438885 RBM26Q5T8P6 1007 aaKnown RBP8□□□□□ -1.13
LINC01649-201ENST00000438885 BICRAQ9NZM4 1560 aa7.98□□□□□ -1.13
LINC01649-201ENST00000438885 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
LINC01649-201ENST00000438885 SMPD1P17405 629 aa7.98□□□□□ -1.13
LINC01649-201ENST00000438885 GMPRP36959 345 aa7.98□□□□□ -1.13
LINC01649-201ENST00000438885 SNIP1Q8TAD8 396 aaKnown RBP7.98□□□□□ -1.13
LINC01649-201ENST00000438885 PXYLP1Q8TE99 480 aa7.98□□□□□ -1.13
LINC01649-201ENST00000438885 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
LINC01649-201ENST00000438885 ZBTB24O43167 697 aaPredicted RBP7.97□□□□□ -1.13
LINC01649-201ENST00000438885 IRF7Q92985 503 aa7.97□□□□□ -1.13
LINC01649-201ENST00000438885 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
LINC01649-201ENST00000438885 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
LINC01649-201ENST00000438885 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.13
LINC01649-201ENST00000438885 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.13
LINC01649-201ENST00000438885 PUS10Q3MIT2 529 aaKnown RBP7.95□□□□□ -1.14
LINC01649-201ENST00000438885 WNT7AO00755 349 aa7.94□□□□□ -1.14
LINC01649-201ENST00000438885 FAM161AQ3B820 660 aa7.94□□□□□ -1.14
LINC01649-201ENST00000438885 NPAS3Q8IXF0 933 aa7.94□□□□□ -1.14
LINC01649-201ENST00000438885 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
LINC01649-201ENST00000438885 HIC1Q14526 733 aa7.92□□□□□ -1.14
LINC01649-201ENST00000438885 SCRIBQ14160 1630 aa7.91□□□□□ -1.14
LINC01649-201ENST00000438885 MORN1Q5T089 497 aa7.91□□□□□ -1.14
LINC01649-201ENST00000438885 THAP11Q96EK4 314 aa7.91□□□□□ -1.14
LINC01649-201ENST00000438885 SALL2Q9Y467 1007 aaPredicted RBP7.91□□□□□ -1.14
LINC01649-201ENST00000438885 J3QL48 77 aa7.9□□□□□ -1.14
LINC01649-201ENST00000438885 FMNL1O95466 1100 aaPredicted RBP7.9□□□□□ -1.14
LINC01649-201ENST00000438885 SHROOM4Q9ULL8 1493 aa7.9□□□□□ -1.15
LINC01649-201ENST00000438885 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
LINC01649-201ENST00000438885 FECHP22830 423 aa7.89□□□□□ -1.15
LINC01649-201ENST00000438885 HPS1Q92902 700 aa7.89□□□□□ -1.15
LINC01649-201ENST00000438885 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
LINC01649-201ENST00000438885 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
LINC01649-201ENST00000438885 RDH13Q8NBN7 331 aa7.88□□□□□ -1.15
LINC01649-201ENST00000438885 MRGPRX2Q96LB1 330 aa7.88□□□□□ -1.15
LINC01649-201ENST00000438885 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
LINC01649-201ENST00000438885 FUT2Q10981 343 aa7.87□□□□□ -1.15
LINC01649-201ENST00000438885 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
LINC01649-201ENST00000438885 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
LINC01649-201ENST00000438885 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
LINC01649-201ENST00000438885 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
LINC01649-201ENST00000438885 H3BM21 787 aa7.86□□□□□ -1.15
LINC01649-201ENST00000438885 SMYD5Q6GMV2 418 aa7.86□□□□□ -1.15
LINC01649-201ENST00000438885 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
LINC01649-201ENST00000438885 VEGFBP49765 207 aa7.85□□□□□ -1.15
LINC01649-201ENST00000438885 TRIM32Q13049 653 aa7.85□□□□□ -1.15
LINC01649-201ENST00000438885 SLC27A5Q9Y2P5 690 aa7.85□□□□□ -1.15
LINC01649-201ENST00000438885 KCNMA1Q12791 1236 aa7.84□□□□□ -1.15
LINC01649-201ENST00000438885 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
LINC01649-201ENST00000438885 DDX11L8A8MPP1 907 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 GNPATO15228 680 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 GCGRP47871 477 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 NLRP7Q8WX94 980 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
LINC01649-201ENST00000438885 GPR37O15354 613 aa7.81□□□□□ -1.16
LINC01649-201ENST00000438885 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
LINC01649-201ENST00000438885 Q3C1V9 767 aa7.81□□□□□ -1.16
LINC01649-201ENST00000438885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC01649-201ENST00000438885 MMP16P51512 607 aa7.8□□□□□ -1.16
LINC01649-201ENST00000438885 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
LINC01649-201ENST00000438885 TMEM151AQ8N4L1 468 aa7.79□□□□□ -1.16
LINC01649-201ENST00000438885 BMP1P13497 986 aa7.78□□□□□ -1.16
LINC01649-201ENST00000438885 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
LINC01649-201ENST00000438885 ALDH1A1P00352 501 aa7.77□□□□□ -1.17
LINC01649-201ENST00000438885 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
LINC01649-201ENST00000438885 RNF19BQ6ZMZ0 732 aa7.77□□□□□ -1.17
LINC01649-201ENST00000438885 TRIM46Q7Z4K8 759 aa7.76□□□□□ -1.17
LINC01649-201ENST00000438885 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
LINC01649-201ENST00000438885 GDF11O95390 407 aa7.75□□□□□ -1.17
LINC01649-201ENST00000438885 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
LINC01649-201ENST00000438885 TULP1O00294 542 aaPredicted RBP7.75□□□□□ -1.17
LINC01649-201ENST00000438885 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
LINC01649-201ENST00000438885 GSK3AP49840 483 aa7.75□□□□□ -1.17
LINC01649-201ENST00000438885 WNT7BP56706 349 aa7.75□□□□□ -1.17
LINC01649-201ENST00000438885 PHOX2BQ99453 314 aa7.75□□□□□ -1.17
LINC01649-201ENST00000438885 EIF4G1Q04637 1599 aaKnown RBP7.74□□□□□ -1.17
LINC01649-201ENST00000438885 CC2D2AQ9P2K1 1620 aa7.74□□□□□ -1.17
LINC01649-201ENST00000438885 RNF225M0QZC1 329 aaPredicted RBP7.73□□□□□ -1.17
LINC01649-201ENST00000438885 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
LINC01649-201ENST00000438885 RASSF7Q02833 373 aa7.72□□□□□ -1.17
LINC01649-201ENST00000438885 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
LINC01649-201ENST00000438885 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
LINC01649-201ENST00000438885 CD46P15529 392 aa7.7□□□□□ -1.18
LINC01649-201ENST00000438885 USP46P62068 366 aa7.7□□□□□ -1.18
LINC01649-201ENST00000438885 SKOR1P84550 965 aa7.69□□□□□ -1.18
LINC01649-201ENST00000438885 DIEXFQ68CQ4 756 aaKnown RBP7.69□□□□□ -1.18
LINC01649-201ENST00000438885 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
LINC01649-201ENST00000438885 ZC3H15Q8WU90 426 aaKnown RBP7.69□□□□□ -1.18
LINC01649-201ENST00000438885 ZFP42Q96MM3 310 aa7.69□□□□□ -1.18
LINC01649-201ENST00000438885 KDM4AO75164 1064 aa7.68□□□□□ -1.18
LINC01649-201ENST00000438885 KRI1Q8N9T8 703 aaKnown RBP7.68□□□□□ -1.18
LINC01649-201ENST00000438885 IRF6O14896 467 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms