RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PTPN5P54829 565 aa7.75□□□□□ -1.17
LSM1P1-201ENST00000438629 PCDHGC3Q9UN70 934 aa7.75□□□□□ -1.17
LSM1P1-201ENST00000438629 C6orf229H3BNL8 230 aa7.74□□□□□ -1.17
LSM1P1-201ENST00000438629 PUS10Q3MIT2 529 aaKnown RBP7.74□□□□□ -1.17
LSM1P1-201ENST00000438629 SCUBE3Q8IX30 993 aa7.74□□□□□ -1.17
LSM1P1-201ENST00000438629 HCSTQ9UBK5 93 aa7.74□□□□□ -1.17
LSM1P1-201ENST00000438629 SLC27A5Q9Y2P5 690 aa7.74□□□□□ -1.17
LSM1P1-201ENST00000438629 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
LSM1P1-201ENST00000438629 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
LSM1P1-201ENST00000438629 QPCTQ16769 361 aa7.73□□□□□ -1.17
LSM1P1-201ENST00000438629 C14orf37Q86TY3 774 aa7.73□□□□□ -1.17
LSM1P1-201ENST00000438629 SPNS2Q8IVW8 549 aa7.73□□□□□ -1.17
LSM1P1-201ENST00000438629 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
LSM1P1-201ENST00000438629 RETREG3Q86VR2 466 aa7.72□□□□□ -1.17
LSM1P1-201ENST00000438629 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
LSM1P1-201ENST00000438629 CABLES1Q8TDN4 633 aa7.72□□□□□ -1.17
LSM1P1-201ENST00000438629 HLA-CQ95604 372 aa7.72□□□□□ -1.17
LSM1P1-201ENST00000438629 APBB1O00213 710 aa7.71□□□□□ -1.18
LSM1P1-201ENST00000438629 BLOC1S3Q6QNY0 202 aa7.71□□□□□ -1.18
LSM1P1-201ENST00000438629 RNF166Q96A37 237 aaPredicted RBP7.71□□□□□ -1.18
LSM1P1-201ENST00000438629 BRICD5Q6PL45 260 aa7.7□□□□□ -1.18
LSM1P1-201ENST00000438629 USB1Q9BQ65 265 aaKnown RBP7.7□□□□□ -1.18
LSM1P1-201ENST00000438629 AP1G2O75843 785 aa7.69□□□□□ -1.18
LSM1P1-201ENST00000438629 DESI1Q6ICB0 168 aa7.69□□□□□ -1.18
LSM1P1-201ENST00000438629 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
LSM1P1-201ENST00000438629 IL21Q9HBE4 155 aa7.69□□□□□ -1.18
LSM1P1-201ENST00000438629 PRM3Q9NNZ6 103 aa7.69□□□□□ -1.18
LSM1P1-201ENST00000438629 SOCS7O14512 581 aa7.68□□□□□ -1.18
LSM1P1-201ENST00000438629 ZPR1O75312 459 aa7.68□□□□□ -1.18
LSM1P1-201ENST00000438629 COPS2P61201 443 aa7.68□□□□□ -1.18
LSM1P1-201ENST00000438629 TSC1Q92574 1164 aa7.67□□□□□ -1.18
LSM1P1-201ENST00000438629 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
LSM1P1-201ENST00000438629 THAP11Q96EK4 314 aa7.67□□□□□ -1.18
LSM1P1-201ENST00000438629 SPSB2Q99619 263 aa7.67□□□□□ -1.18
LSM1P1-201ENST00000438629 MTRQ99707 1265 aa7.67□□□□□ -1.18
LSM1P1-201ENST00000438629 TJAP1Q5JTD0 557 aa7.66□□□□□ -1.18
LSM1P1-201ENST00000438629 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 RAD21O60216 631 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 MCM6Q14566 821 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 MSS51Q4VC12 460 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 FBXO31Q5XUX0 539 aaPredicted RBP7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
LSM1P1-201ENST00000438629 ADH1BP00325 375 aa7.64□□□□□ -1.19
LSM1P1-201ENST00000438629 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
LSM1P1-201ENST00000438629 CTDSPL2Q05D32 466 aa7.64□□□□□ -1.19
LSM1P1-201ENST00000438629 KCNC4Q03721 635 aa7.63□□□□□ -1.19
LSM1P1-201ENST00000438629 LYPD8Q6UX82 237 aa7.63□□□□□ -1.19
LSM1P1-201ENST00000438629 SNRKQ9NRH2 765 aa7.63□□□□□ -1.19
LSM1P1-201ENST00000438629 JUNDP17535 347 aa7.62□□□□□ -1.19
LSM1P1-201ENST00000438629 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
LSM1P1-201ENST00000438629 A6NJR5 290 aa7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 MMRN1Q13201 1228 aa7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 WWC1Q8IX03 1113 aa7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 FAM160A2Q8N612 972 aaPredicted RBP7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 ZNF516Q92618 1163 aa7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 SLC6A16Q9GZN6 736 aa7.61□□□□□ -1.19
LSM1P1-201ENST00000438629 DXOO77932 396 aaKnown RBP7.6□□□□□ -1.19
LSM1P1-201ENST00000438629 ITGBL1O95965 494 aaPredicted RBP7.6□□□□□ -1.19
LSM1P1-201ENST00000438629 MMP16P51512 607 aa7.6□□□□□ -1.19
LSM1P1-201ENST00000438629 PTPRNQ16849 979 aa7.6□□□□□ -1.19
LSM1P1-201ENST00000438629 MTMR14Q8NCE2 650 aa7.59□□□□□ -1.19
LSM1P1-201ENST00000438629 GGCXP38435 758 aa7.58□□□□□ -1.2
LSM1P1-201ENST00000438629 NDUFB9Q9Y6M9 179 aa7.58□□□□□ -1.2
LSM1P1-201ENST00000438629 TLL1O43897 1013 aa7.57□□□□□ -1.2
LSM1P1-201ENST00000438629 LRRN4Q8WUT4 740 aa7.57□□□□□ -1.2
LSM1P1-201ENST00000438629 PER1O15534 1290 aaPredicted RBP7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 NUDT12Q9BQG2 462 aa7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
LSM1P1-201ENST00000438629 CTHP32929 405 aa7.55□□□□□ -1.2
LSM1P1-201ENST00000438629 GJD4Q96KN9 370 aaPredicted RBP7.55□□□□□ -1.2
LSM1P1-201ENST00000438629 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
LSM1P1-201ENST00000438629 NR6A1Q15406 480 aa7.54□□□□□ -1.2
LSM1P1-201ENST00000438629 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
LSM1P1-201ENST00000438629 CLUAP1Q96AJ1 413 aa7.54□□□□□ -1.2
LSM1P1-201ENST00000438629 F12P00748 615 aaPredicted RBP7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 PROSER2Q86WR7 435 aaPredicted RBP7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 GDPD2Q9HCC8 539 aa7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 HMX1Q9NP08 348 aaPredicted RBP7.53□□□□□ -1.2
LSM1P1-201ENST00000438629 ZC3H4Q9UPT8 1303 aaKnown RBP7.52□□□□□ -1.2
LSM1P1-201ENST00000438629 TRAK2O60296 914 aa7.52□□□□□ -1.21
LSM1P1-201ENST00000438629 S1PR4O95977 384 aa7.52□□□□□ -1.21
LSM1P1-201ENST00000438629 ABL2P42684 1182 aa7.52□□□□□ -1.21
LSM1P1-201ENST00000438629 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
LSM1P1-201ENST00000438629 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.21
LSM1P1-201ENST00000438629 POM121Q96HA1 1249 aa7.51□□□□□ -1.21
LSM1P1-201ENST00000438629 FKBPLQ9UIM3 349 aa7.51□□□□□ -1.21
LSM1P1-201ENST00000438629 TBC1D2BQ9UPU7 963 aa7.51□□□□□ -1.21
LSM1P1-201ENST00000438629 ANKLE1Q8NAG6 615 aa7.5□□□□□ -1.21
LSM1P1-201ENST00000438629 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.5□□□□□ -1.21
LSM1P1-201ENST00000438629 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms