RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC00475-207ENST00000438322 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
LINC00475-207ENST00000438322 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
LINC00475-207ENST00000438322 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
LINC00475-207ENST00000438322 LAMC1P11047 1609 aa15.35■□□□□ 0.05
LINC00475-207ENST00000438322 CFAP70Q5T0N1 1121 aa15.35■□□□□ 0.05
LINC00475-207ENST00000438322 CDC42BPGQ6DT37 1551 aa15.35■□□□□ 0.05
LINC00475-207ENST00000438322 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
LINC00475-207ENST00000438322 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
LINC00475-207ENST00000438322 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
LINC00475-207ENST00000438322 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
LINC00475-207ENST00000438322 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
LINC00475-207ENST00000438322 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
LINC00475-207ENST00000438322 MYOM2P54296 1465 aa15.33■□□□□ 0.04
LINC00475-207ENST00000438322 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
LINC00475-207ENST00000438322 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
LINC00475-207ENST00000438322 DHX57Q6P158 1386 aaKnown RBP15.31■□□□□ 0.04
LINC00475-207ENST00000438322 TECPR2O15040 1411 aa15.3■□□□□ 0.04
LINC00475-207ENST00000438322 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
LINC00475-207ENST00000438322 PNPLA6Q8IY17 1366 aa15.3■□□□□ 0.04
LINC00475-207ENST00000438322 ABCC11Q96J66 1382 aa15.3■□□□□ 0.04
LINC00475-207ENST00000438322 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
LINC00475-207ENST00000438322 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
LINC00475-207ENST00000438322 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
LINC00475-207ENST00000438322 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
LINC00475-207ENST00000438322 POGKQ9P215 609 aa15.29■□□□□ 0.04
LINC00475-207ENST00000438322 AFF2P51816 1311 aa15.28■□□□□ 0.04
LINC00475-207ENST00000438322 PRAM1Q96QH2 718 aa15.28■□□□□ 0.04
LINC00475-207ENST00000438322 FOXO3O43524 673 aa15.27■□□□□ 0.04
LINC00475-207ENST00000438322 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.04
LINC00475-207ENST00000438322 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.04
LINC00475-207ENST00000438322 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
LINC00475-207ENST00000438322 HIRIP3Q9BW71 556 aaPredicted RBP15.25■□□□□ 0.03
LINC00475-207ENST00000438322 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
LINC00475-207ENST00000438322 SOS2Q07890 1332 aaPredicted RBP15.24■□□□□ 0.03
LINC00475-207ENST00000438322 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
LINC00475-207ENST00000438322 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
LINC00475-207ENST00000438322 PXDNQ92626 1479 aa15.22■□□□□ 0.03
LINC00475-207ENST00000438322 ADGRB1O14514 1584 aa15.22■□□□□ 0.03
LINC00475-207ENST00000438322 RXRBP28702 533 aa15.21■□□□□ 0.03
LINC00475-207ENST00000438322 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
LINC00475-207ENST00000438322 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.02
LINC00475-207ENST00000438322 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
LINC00475-207ENST00000438322 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
LINC00475-207ENST00000438322 MARF1Q9Y4F3 1742 aaKnown RBP15.2■□□□□ 0.02
LINC00475-207ENST00000438322 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
LINC00475-207ENST00000438322 KRT28Q7Z3Y7 464 aa15.19■□□□□ 0.02
LINC00475-207ENST00000438322 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
LINC00475-207ENST00000438322 PHF8Q9UPP1 1060 aa15.19■□□□□ 0.02
LINC00475-207ENST00000438322 USP32Q8NFA0 1604 aa15.18■□□□□ 0.02
LINC00475-207ENST00000438322 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
LINC00475-207ENST00000438322 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
LINC00475-207ENST00000438322 USP21Q9UK80 565 aa15.17■□□□□ 0.02
LINC00475-207ENST00000438322 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
LINC00475-207ENST00000438322 PSME1Q06323 249 aa15.16■□□□□ 0.02
LINC00475-207ENST00000438322 NEUROD1Q13562 356 aa15.15■□□□□ 0.02
LINC00475-207ENST00000438322 CABLES1Q8TDN4 633 aa15.14■□□□□ 0.01
LINC00475-207ENST00000438322 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
LINC00475-207ENST00000438322 RGS12O14924 1447 aa15.13■□□□□ 0.01
LINC00475-207ENST00000438322 RBM6P78332 1123 aaKnown RBP15.13■□□□□ 0.01
LINC00475-207ENST00000438322 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
LINC00475-207ENST00000438322 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
LINC00475-207ENST00000438322 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
LINC00475-207ENST00000438322 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 ANKARQ7Z5J8 1434 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
LINC00475-207ENST00000438322 STAC3Q96MF2 364 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 PRR36Q9H6K5 1346 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
LINC00475-207ENST00000438322 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
LINC00475-207ENST00000438322 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
LINC00475-207ENST00000438322 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
LINC00475-207ENST00000438322 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
LINC00475-207ENST00000438322 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
LINC00475-207ENST00000438322 TRPC5Q9UL62 973 aaPredicted RBP15.1■□□□□ 0.01
LINC00475-207ENST00000438322 GPRASP1Q5JY77 1395 aa15.1■□□□□ 0.01
LINC00475-207ENST00000438322 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
LINC00475-207ENST00000438322 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
LINC00475-207ENST00000438322 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
LINC00475-207ENST00000438322 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
LINC00475-207ENST00000438322 QRICH2Q9H0J4 1663 aa15.08■□□□□ 0
LINC00475-207ENST00000438322 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
LINC00475-207ENST00000438322 FNBP4Q8N3X1 1017 aaPredicted RBP15.07■□□□□ 0
LINC00475-207ENST00000438322 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00475-207ENST00000438322 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
LINC00475-207ENST00000438322 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
LINC00475-207ENST00000438322 ARHGEF10O15013 1369 aa15.07■□□□□ 0
LINC00475-207ENST00000438322 ATRNO75882 1429 aa15.07■□□□□ 0
LINC00475-207ENST00000438322 CDK19Q9BWU1 502 aa15.06■□□□□ 0
LINC00475-207ENST00000438322 SBNO1A3KN83 1393 aa15.06■□□□□ 0
LINC00475-207ENST00000438322 ATP7BP35670 1465 aa15.06■□□□□ 0
LINC00475-207ENST00000438322 BCL9LQ86UU0 1499 aa15.06■□□□□ 0
LINC00475-207ENST00000438322 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.06■□□□□ 0
LINC00475-207ENST00000438322 ALS2Q96Q42 1657 aa15.05■□□□□ -0
LINC00475-207ENST00000438322 TRPM1Q7Z4N2 1603 aa15.04■□□□□ -0
LINC00475-207ENST00000438322 SRPK2P78362 688 aaKnown RBP15.04■□□□□ -0
LINC00475-207ENST00000438322 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
LINC00475-207ENST00000438322 CENPJQ9HC77 1338 aaPredicted RBP15.03■□□□□ -0
LINC00475-207ENST00000438322 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms