RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 UPF2Q9HAU5 1272 aaKnown RBP5.5□□□□□ -1.53
HLA-N-201ENST00000437516 BRPF3Q9ULD4 1205 aa5.5□□□□□ -1.53
HLA-N-201ENST00000437516 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
HLA-N-201ENST00000437516 ERCC6L2Q5T890 1561 aa5.5□□□□□ -1.53
HLA-N-201ENST00000437516 SETBP1Q9Y6X0 1596 aa5.5□□□□□ -1.53
HLA-N-201ENST00000437516 ATP7AQ04656 1500 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 LMTK2Q8IWU2 1503 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 ABCA6Q8N139 1617 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 CHD1O14646 1710 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 KIF3BO15066 747 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 SEC24BO95487 1268 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 L1TD1Q5T7N2 865 aaKnown RBP5.49□□□□□ -1.53
HLA-N-201ENST00000437516 PANK1Q8TE04 598 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 MYH16Q9H6N6 1097 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 PDZRN3Q9UPQ7 1066 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 FANCAO15360 1455 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 IQSEC2Q5JU85 1478 aa5.49□□□□□ -1.53
HLA-N-201ENST00000437516 INO80Q9ULG1 1556 aaPredicted RBP5.49□□□□□ -1.53
HLA-N-201ENST00000437516 NSD3Q9BZ95 1437 aa5.48□□□□□ -1.53
HLA-N-201ENST00000437516 CT47B1P0C2W7 299 aaPredicted RBP5.48□□□□□ -1.53
HLA-N-201ENST00000437516 TCP11L2Q8N4U5 519 aa5.48□□□□□ -1.53
HLA-N-201ENST00000437516 TBC1D32Q96NH3 1257 aa5.48□□□□□ -1.53
HLA-N-201ENST00000437516 PCDHB15Q9Y5E8 787 aa5.48□□□□□ -1.53
HLA-N-201ENST00000437516 RPGRIP1LQ68CZ1 1315 aa5.48□□□□□ -1.53
HLA-N-201ENST00000437516 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 ZNF518AQ6AHZ1 1483 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 NLRP1Q9C000 1473 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 NSD2O96028 1365 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 ANTXR1Q9H6X2 564 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 C14orf93Q9H972 538 aaKnown RBP5.47□□□□□ -1.53
HLA-N-201ENST00000437516 IFT172Q9UG01 1749 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 ABCA9Q8IUA7 1624 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 MROH1Q8NDA8 1641 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 USP32Q8NFA0 1604 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 ADGRB3O60242 1522 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 EFCAB6Q5THR3 1501 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 NOS1P29475 1434 aa5.47□□□□□ -1.53
HLA-N-201ENST00000437516 ADGRL1O94910 1474 aa5.46□□□□□ -1.53
HLA-N-201ENST00000437516 MTHFSP49914 203 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 MVPQ14764 893 aaKnown RBP5.46□□□□□ -1.54
HLA-N-201ENST00000437516 NEUROD2Q15784 382 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 ZKSCAN2Q63HK3 967 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 DZIP1LQ8IYY4 767 aaKnown RBP5.46□□□□□ -1.54
HLA-N-201ENST00000437516 TBC1D2Q9BYX2 928 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 SLC12A5Q9H2X9 1139 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 CHMP5Q9NZZ3 219 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 TNNQ9UQP3 1299 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 RRP7AQ9Y3A4 280 aaKnown RBP5.46□□□□□ -1.54
HLA-N-201ENST00000437516 UGGT1Q9NYU2 1555 aa5.46□□□□□ -1.54
HLA-N-201ENST00000437516 ANKRD36BQ8N2N9 1353 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 CHGAP10645 457 aaKnown RBP5.45□□□□□ -1.54
HLA-N-201ENST00000437516 RLBP1P12271 317 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 PRKCSHP14314 528 aaPredicted RBP5.45□□□□□ -1.54
HLA-N-201ENST00000437516 HDAC1Q13547 482 aaPredicted RBP5.45□□□□□ -1.54
HLA-N-201ENST00000437516 RSPH6AQ9H0K4 717 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 POGKQ9P215 609 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 TRAK1Q9UPV9 953 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 IL16Q14005 1332 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 EVC2Q86UK5 1308 aa5.45□□□□□ -1.54
HLA-N-201ENST00000437516 ABCC11Q96J66 1382 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 MROH2AA6NES4 1674 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 VIRMAQ69YN4 1812 aaKnown RBP5.44□□□□□ -1.54
HLA-N-201ENST00000437516 ADGRB1O14514 1584 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 ADGRB2O60241 1585 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 MCM4P33991 863 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 C22orf23Q9BZE7 217 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
HLA-N-201ENST00000437516 PNNQ9H307 717 aaKnown RBP5.44□□□□□ -1.54
HLA-N-201ENST00000437516 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.44□□□□□ -1.54
HLA-N-201ENST00000437516 DDX19BQ9UMR2 479 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 KIF1BO60333 1816 aa5.44□□□□□ -1.54
HLA-N-201ENST00000437516 ZC3H13Q5T200 1668 aaKnown RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 GOLGA6L3A6NEY3 463 aa5.43□□□□□ -1.54
HLA-N-201ENST00000437516 U2AF1L5P0DN76 240 aaPredicted RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 TNNT2P45379 298 aaPredicted RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 U2AF1Q01081 240 aaKnown RBP eCLIP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 EXOSC9Q06265 439 aaKnown RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 SMC5Q8IY18 1101 aa5.43□□□□□ -1.54
HLA-N-201ENST00000437516 FTSJ3Q8IY81 847 aaKnown RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 PLEKHF1Q96S99 279 aa5.43□□□□□ -1.54
HLA-N-201ENST00000437516 BCL2L13Q9BXK5 485 aa5.43□□□□□ -1.54
HLA-N-201ENST00000437516 PPRC1Q5VV67 1664 aaKnown RBP5.43□□□□□ -1.54
HLA-N-201ENST00000437516 FSD2A1L4K1 749 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 VGFO15240 615 aaPredicted RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 IPO8O15397 1037 aaKnown RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 PTMSP20962 102 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 TMPOP42166 694 aaKnown RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 ALDH1L2Q3SY69 923 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 ATF7IPQ6VMQ6 1270 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 HSCBQ8IWL3 235 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 SNX21Q969T3 373 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 CHMP4BQ9H444 224 aaKnown RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 SMC4Q9NTJ3 1288 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 ISY1Q9ULR0 285 aaKnown RBP5.42□□□□□ -1.54
HLA-N-201ENST00000437516 QRICH2Q9H0J4 1663 aa5.42□□□□□ -1.54
HLA-N-201ENST00000437516 NPATQ14207 1427 aa5.41□□□□□ -1.54
HLA-N-201ENST00000437516 MED14O60244 1454 aa5.41□□□□□ -1.54
HLA-N-201ENST00000437516 MLH3Q9UHC1 1453 aa5.41□□□□□ -1.54
HLA-N-201ENST00000437516 DDX11L8A8MPP1 907 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms