RNA–Protein interactions for RNA: ENST00000436377.1

LINC01641-201, Transcript of long intergenic non-protein coding RNA 1641, humanhuman

TSL 2

Gene LINC01641, Length 422 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01641-201ENST00000436377 AXIN1O15169 862 aa13.34□□□□□ -0.27
LINC01641-201ENST00000436377 MMP16P51512 607 aa13.34□□□□□ -0.27
LINC01641-201ENST00000436377 CD46P15529 392 aa13.33□□□□□ -0.28
LINC01641-201ENST00000436377 WNT7AO00755 349 aa13.32□□□□□ -0.28
LINC01641-201ENST00000436377 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
LINC01641-201ENST00000436377 Q3C1V9 767 aa13.31□□□□□ -0.28
LINC01641-201ENST00000436377 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
LINC01641-201ENST00000436377 TRIM32Q13049 653 aa13.3□□□□□ -0.28
LINC01641-201ENST00000436377 SMPD1P17405 629 aa13.28□□□□□ -0.28
LINC01641-201ENST00000436377 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.29
LINC01641-201ENST00000436377 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
LINC01641-201ENST00000436377 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
LINC01641-201ENST00000436377 SNIP1Q8TAD8 396 aaKnown RBP13.26□□□□□ -0.29
LINC01641-201ENST00000436377 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
LINC01641-201ENST00000436377 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
LINC01641-201ENST00000436377 KDM4AO75164 1064 aa13.24□□□□□ -0.29
LINC01641-201ENST00000436377 MRGPRX2Q96LB1 330 aa13.23□□□□□ -0.29
LINC01641-201ENST00000436377 USP46P62068 366 aa13.22□□□□□ -0.29
LINC01641-201ENST00000436377 WFS1O76024 890 aa13.21□□□□□ -0.29
LINC01641-201ENST00000436377 IRF6O14896 467 aa13.2□□□□□ -0.3
LINC01641-201ENST00000436377 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
LINC01641-201ENST00000436377 HLA-CQ95604 372 aa13.2□□□□□ -0.3
LINC01641-201ENST00000436377 J3QL48 77 aa13.19□□□□□ -0.3
LINC01641-201ENST00000436377 ATP13A2Q9NQ11 1180 aa13.19□□□□□ -0.3
LINC01641-201ENST00000436377 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
LINC01641-201ENST00000436377 HOXA2O43364 376 aa13.17□□□□□ -0.3
LINC01641-201ENST00000436377 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
LINC01641-201ENST00000436377 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
LINC01641-201ENST00000436377 SKOR1P84550 965 aa13.15□□□□□ -0.3
LINC01641-201ENST00000436377 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
LINC01641-201ENST00000436377 WNT7BP56706 349 aa13.14□□□□□ -0.31
LINC01641-201ENST00000436377 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
LINC01641-201ENST00000436377 WIPF1O43516 503 aa13.13□□□□□ -0.31
LINC01641-201ENST00000436377 SNRPBP14678 240 aaKnown RBP13.13□□□□□ -0.31
LINC01641-201ENST00000436377 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
LINC01641-201ENST00000436377 HPS1Q92902 700 aa13.13□□□□□ -0.31
LINC01641-201ENST00000436377 LCE2CQ5TA81 110 aa13.11□□□□□ -0.31
LINC01641-201ENST00000436377 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
LINC01641-201ENST00000436377 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
LINC01641-201ENST00000436377 JUNDP17535 347 aa13.1□□□□□ -0.31
LINC01641-201ENST00000436377 GUCA2AQ02747 115 aa13.1□□□□□ -0.31
LINC01641-201ENST00000436377 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
LINC01641-201ENST00000436377 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
LINC01641-201ENST00000436377 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.32
LINC01641-201ENST00000436377 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
LINC01641-201ENST00000436377 TERTO14746 1132 aaKnown RBP13.06□□□□□ -0.32
LINC01641-201ENST00000436377 CLCN1P35523 988 aa13.06□□□□□ -0.32
LINC01641-201ENST00000436377 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
LINC01641-201ENST00000436377 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
LINC01641-201ENST00000436377 STK17AQ9UEE5 414 aa13.05□□□□□ -0.32
LINC01641-201ENST00000436377 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
LINC01641-201ENST00000436377 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
LINC01641-201ENST00000436377 SIAH2O43255 324 aa13.03□□□□□ -0.32
LINC01641-201ENST00000436377 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
LINC01641-201ENST00000436377 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
LINC01641-201ENST00000436377 INSM1Q01101 510 aaPredicted RBP13.01□□□□□ -0.33
LINC01641-201ENST00000436377 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
LINC01641-201ENST00000436377 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
LINC01641-201ENST00000436377 PCDHGC3Q9UN70 934 aa12.99□□□□□ -0.33
LINC01641-201ENST00000436377 FDX1P10109 184 aa12.97□□□□□ -0.33
LINC01641-201ENST00000436377 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
LINC01641-201ENST00000436377 CCNYL3P0C7X3 344 aa12.94□□□□□ -0.34
LINC01641-201ENST00000436377 SH3BP2P78314 561 aa12.94□□□□□ -0.34
LINC01641-201ENST00000436377 MS4A1P11836 297 aa12.93□□□□□ -0.34
LINC01641-201ENST00000436377 TRIM46Q7Z4K8 759 aa12.93□□□□□ -0.34
LINC01641-201ENST00000436377 PTPRNQ16849 979 aa12.92□□□□□ -0.34
LINC01641-201ENST00000436377 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
LINC01641-201ENST00000436377 BMP1P13497 986 aa12.91□□□□□ -0.34
LINC01641-201ENST00000436377 SPIRE2Q8WWL2 714 aa12.91□□□□□ -0.34
LINC01641-201ENST00000436377 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
LINC01641-201ENST00000436377 CAPN5O15484 640 aaPredicted RBP12.89□□□□□ -0.35
LINC01641-201ENST00000436377 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
LINC01641-201ENST00000436377 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
LINC01641-201ENST00000436377 SSTR3P32745 418 aaPredicted RBP12.88□□□□□ -0.35
LINC01641-201ENST00000436377 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
LINC01641-201ENST00000436377 EVA1BQ9NVM1 165 aa12.88□□□□□ -0.35
LINC01641-201ENST00000436377 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
LINC01641-201ENST00000436377 NDUFV2P19404 249 aa12.86□□□□□ -0.35
LINC01641-201ENST00000436377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01641-201ENST00000436377 NPAS3Q8IXF0 933 aa12.86□□□□□ -0.35
LINC01641-201ENST00000436377 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
LINC01641-201ENST00000436377 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
LINC01641-201ENST00000436377 KCNH2Q12809 1159 aa12.84□□□□□ -0.35
LINC01641-201ENST00000436377 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
LINC01641-201ENST00000436377 MPNDQ8N594 471 aa12.84□□□□□ -0.35
LINC01641-201ENST00000436377 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
LINC01641-201ENST00000436377 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
LINC01641-201ENST00000436377 LINC01559Q495D7 138 aa12.83□□□□□ -0.36
LINC01641-201ENST00000436377 BAP1Q92560 729 aa12.83□□□□□ -0.36
LINC01641-201ENST00000436377 LORP23490 312 aaPredicted RBP12.82□□□□□ -0.36
LINC01641-201ENST00000436377 AMHR2Q16671 573 aa12.82□□□□□ -0.36
LINC01641-201ENST00000436377 ZNF511Q8NB15 262 aa12.82□□□□□ -0.36
LINC01641-201ENST00000436377 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
LINC01641-201ENST00000436377 H3BM21 787 aa12.8□□□□□ -0.36
LINC01641-201ENST00000436377 VARSP26640 1264 aaKnown RBP12.8□□□□□ -0.36
LINC01641-201ENST00000436377 GMPRP36959 345 aa12.8□□□□□ -0.36
LINC01641-201ENST00000436377 MTMR2Q13614 643 aa12.8□□□□□ -0.36
LINC01641-201ENST00000436377 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
LINC01641-201ENST00000436377 IRF7Q92985 503 aa12.79□□□□□ -0.36
LINC01641-201ENST00000436377 GJA5P36382 358 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms