RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 TMC1Q8TDI8 760 aa18■□□□□ 0.47
AP001046.1-201ENST00000435702 GPRASP1Q5JY77 1395 aa17.97■□□□□ 0.47
AP001046.1-201ENST00000435702 PTPRUQ92729 1446 aa17.97■□□□□ 0.47
AP001046.1-201ENST00000435702 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
AP001046.1-201ENST00000435702 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
AP001046.1-201ENST00000435702 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
AP001046.1-201ENST00000435702 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
AP001046.1-201ENST00000435702 XRN1Q8IZH2 1706 aaKnown RBP17.94■□□□□ 0.46
AP001046.1-201ENST00000435702 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
AP001046.1-201ENST00000435702 NWD1Q149M9 1564 aa17.94■□□□□ 0.46
AP001046.1-201ENST00000435702 LRPPRCP42704 1394 aaKnown RBP17.93■□□□□ 0.46
AP001046.1-201ENST00000435702 STRCP1A6NGW2 1772 aa17.93■□□□□ 0.46
AP001046.1-201ENST00000435702 KNDC1Q76NI1 1749 aa17.92■□□□□ 0.46
AP001046.1-201ENST00000435702 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
AP001046.1-201ENST00000435702 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
AP001046.1-201ENST00000435702 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
AP001046.1-201ENST00000435702 KNSTRNQ9Y448 316 aa17.9■□□□□ 0.46
AP001046.1-201ENST00000435702 TECPR2O15040 1411 aa17.9■□□□□ 0.46
AP001046.1-201ENST00000435702 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
AP001046.1-201ENST00000435702 CPS1P31327 1500 aa17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 KCNA6P17658 529 aa17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 ZNF335Q9H4Z2 1342 aaPredicted RBP17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
AP001046.1-201ENST00000435702 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
AP001046.1-201ENST00000435702 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
AP001046.1-201ENST00000435702 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
AP001046.1-201ENST00000435702 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
AP001046.1-201ENST00000435702 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
AP001046.1-201ENST00000435702 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
AP001046.1-201ENST00000435702 POGKQ9P215 609 aa17.85■□□□□ 0.45
AP001046.1-201ENST00000435702 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
AP001046.1-201ENST00000435702 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
AP001046.1-201ENST00000435702 PLEKHH1Q9ULM0 1364 aa17.84■□□□□ 0.45
AP001046.1-201ENST00000435702 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
AP001046.1-201ENST00000435702 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.45
AP001046.1-201ENST00000435702 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.45
AP001046.1-201ENST00000435702 MYBBP1AQ9BQG0 1328 aaKnown RBP17.83■□□□□ 0.44
AP001046.1-201ENST00000435702 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.44
AP001046.1-201ENST00000435702 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
AP001046.1-201ENST00000435702 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
AP001046.1-201ENST00000435702 RBM19Q9Y4C8 960 aaKnown RBP17.82■□□□□ 0.44
AP001046.1-201ENST00000435702 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
AP001046.1-201ENST00000435702 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
AP001046.1-201ENST00000435702 RALBP1Q15311 655 aa17.8■□□□□ 0.44
AP001046.1-201ENST00000435702 CDCA8Q53HL2 280 aa17.8■□□□□ 0.44
AP001046.1-201ENST00000435702 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
AP001046.1-201ENST00000435702 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.79■□□□□ 0.44
AP001046.1-201ENST00000435702 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
AP001046.1-201ENST00000435702 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
AP001046.1-201ENST00000435702 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
AP001046.1-201ENST00000435702 NALCNQ8IZF0 1738 aa17.77■□□□□ 0.44
AP001046.1-201ENST00000435702 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.44
AP001046.1-201ENST00000435702 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
AP001046.1-201ENST00000435702 TMEM94Q12767 1356 aa17.77■□□□□ 0.43
AP001046.1-201ENST00000435702 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
AP001046.1-201ENST00000435702 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
AP001046.1-201ENST00000435702 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
AP001046.1-201ENST00000435702 NCOA3Q9Y6Q9 1424 aa17.73■□□□□ 0.43
AP001046.1-201ENST00000435702 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
AP001046.1-201ENST00000435702 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
AP001046.1-201ENST00000435702 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
AP001046.1-201ENST00000435702 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
AP001046.1-201ENST00000435702 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
AP001046.1-201ENST00000435702 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
AP001046.1-201ENST00000435702 FBLN1P23142 703 aa17.71■□□□□ 0.43
AP001046.1-201ENST00000435702 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
AP001046.1-201ENST00000435702 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
AP001046.1-201ENST00000435702 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
AP001046.1-201ENST00000435702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
AP001046.1-201ENST00000435702 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
AP001046.1-201ENST00000435702 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
AP001046.1-201ENST00000435702 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
AP001046.1-201ENST00000435702 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
AP001046.1-201ENST00000435702 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
AP001046.1-201ENST00000435702 ZBED9Q6R2W3 1325 aa17.68■□□□□ 0.42
AP001046.1-201ENST00000435702 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
AP001046.1-201ENST00000435702 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
AP001046.1-201ENST00000435702 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
AP001046.1-201ENST00000435702 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
AP001046.1-201ENST00000435702 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.42
AP001046.1-201ENST00000435702 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
AP001046.1-201ENST00000435702 MSH6P52701 1360 aa17.66■□□□□ 0.42
AP001046.1-201ENST00000435702 WASLO00401 505 aaPredicted RBP17.65■□□□□ 0.42
AP001046.1-201ENST00000435702 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
AP001046.1-201ENST00000435702 DCCP43146 1447 aa17.65■□□□□ 0.42
AP001046.1-201ENST00000435702 USP32Q8NFA0 1604 aa17.64■□□□□ 0.41
AP001046.1-201ENST00000435702 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
AP001046.1-201ENST00000435702 MSH5O43196 834 aa17.62■□□□□ 0.41
AP001046.1-201ENST00000435702 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
AP001046.1-201ENST00000435702 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
AP001046.1-201ENST00000435702 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
AP001046.1-201ENST00000435702 ATP7BP35670 1465 aa17.6■□□□□ 0.41
AP001046.1-201ENST00000435702 MST1RQ04912 1400 aa17.6■□□□□ 0.41
AP001046.1-201ENST00000435702 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
AP001046.1-201ENST00000435702 ATF3P18847 181 aa17.6■□□□□ 0.41
AP001046.1-201ENST00000435702 SOX12O15370 315 aa17.59■□□□□ 0.41
AP001046.1-201ENST00000435702 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms