RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 TICAM2Q86XR7 235 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
VRK2-206ENST00000435505 WASHC2CQ9Y4E1 1318 aa8.18□□□□□ -1.1
VRK2-206ENST00000435505 RSF1Q96T23 1441 aaPredicted RBP8.18□□□□□ -1.1
VRK2-206ENST00000435505 RBM46Q8TBY0 533 aaKnown RBP8.18□□□□□ -1.1
VRK2-206ENST00000435505 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
VRK2-206ENST00000435505 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
VRK2-206ENST00000435505 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
VRK2-206ENST00000435505 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 KIF12Q96FN5 646 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
VRK2-206ENST00000435505 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 DPY19L2Q6NUT2 758 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 RIPOR2Q9Y4F9 1068 aa8.17□□□□□ -1.1
VRK2-206ENST00000435505 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
VRK2-206ENST00000435505 CABLES1Q8TDN4 633 aa8.16□□□□□ -1.1
VRK2-206ENST00000435505 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
VRK2-206ENST00000435505 SSFA2P28290 1259 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 GLIPR1L2Q4G1C9 344 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 NDUFV2P19404 249 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.1
VRK2-206ENST00000435505 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 IPO9Q96P70 1041 aaKnown RBP8.15□□□□□ -1.1
VRK2-206ENST00000435505 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 BIN2Q9UBW5 565 aaPredicted RBP8.15□□□□□ -1.1
VRK2-206ENST00000435505 SUGT1Q9Y2Z0 365 aa8.15□□□□□ -1.1
VRK2-206ENST00000435505 SOCS7O14512 581 aa8.14□□□□□ -1.11
VRK2-206ENST00000435505 ERCC5P28715 1186 aaPredicted RBP8.14□□□□□ -1.11
VRK2-206ENST00000435505 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
VRK2-206ENST00000435505 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
VRK2-206ENST00000435505 VAMP1P23763 118 aa8.14□□□□□ -1.11
VRK2-206ENST00000435505 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
VRK2-206ENST00000435505 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
VRK2-206ENST00000435505 LILRB3O75022 631 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 TMC2Q8TDI7 906 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 ANP32AP39687 249 aaKnown RBP8.13□□□□□ -1.11
VRK2-206ENST00000435505 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
VRK2-206ENST00000435505 PPP4R2Q9NY27 417 aa8.13□□□□□ -1.11
VRK2-206ENST00000435505 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
VRK2-206ENST00000435505 SPTLC1O15269 473 aa8.12□□□□□ -1.11
VRK2-206ENST00000435505 DDX10Q13206 875 aaKnown RBP8.12□□□□□ -1.11
VRK2-206ENST00000435505 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
VRK2-206ENST00000435505 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
VRK2-206ENST00000435505 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
VRK2-206ENST00000435505 NEFMP07197 916 aa8.11□□□□□ -1.11
VRK2-206ENST00000435505 HDLBPQ00341 1268 aaKnown RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
VRK2-206ENST00000435505 BCCIPQ9P287 314 aaKnown RBP eCLIP8.11□□□□□ -1.11
VRK2-206ENST00000435505 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
VRK2-206ENST00000435505 A0A0U1RQG5 324 aaPredicted RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
VRK2-206ENST00000435505 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
VRK2-206ENST00000435505 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
VRK2-206ENST00000435505 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
VRK2-206ENST00000435505 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
VRK2-206ENST00000435505 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
VRK2-206ENST00000435505 CLSTN1O94985 981 aa8.1□□□□□ -1.11
VRK2-206ENST00000435505 LARGE2Q8N3Y3 721 aa8.1□□□□□ -1.11
VRK2-206ENST00000435505 RAD51AP2Q09MP3 1159 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 FAM69CQ0P6D2 419 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 TANGO6Q9C0B7 1094 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 PIF1Q9H611 641 aa8.09□□□□□ -1.11
VRK2-206ENST00000435505 EIF4G1Q04637 1599 aaKnown RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 MAP3K7O43318 606 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 EVI5O60447 810 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 LRRN4Q8WUT4 740 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 TMEM106CQ9BVX2 250 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 ATP9BO43861 1147 aa8.08□□□□□ -1.12
VRK2-206ENST00000435505 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
VRK2-206ENST00000435505 EEA1Q15075 1411 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 PLEKHD1A6NEE1 506 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 PITPNM1O00562 1244 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 EN1Q05925 392 aaPredicted RBP8.07□□□□□ -1.12
VRK2-206ENST00000435505 CCDC144BQ3MJ40 725 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 ANO2Q9NQ90 1003 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 KIF3CO14782 793 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
VRK2-206ENST00000435505 ADGRG1Q9Y653 693 aa8.07□□□□□ -1.12
VRK2-206ENST00000435505 TPD52L2O43399 206 aaKnown RBP8.06□□□□□ -1.12
VRK2-206ENST00000435505 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
VRK2-206ENST00000435505 AKT1S1Q96B36 256 aa8.06□□□□□ -1.12
VRK2-206ENST00000435505 EGFLAMQ63HQ2 1017 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms