RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 TULP4Q9NRJ4 1543 aa17.41■□□□□ 0.38
SCRN1-207ENST00000434476 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
SCRN1-207ENST00000434476 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
SCRN1-207ENST00000434476 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
SCRN1-207ENST00000434476 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
SCRN1-207ENST00000434476 YTHDC2Q9H6S0 1430 aaKnown RBP17.39■□□□□ 0.37
SCRN1-207ENST00000434476 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
SCRN1-207ENST00000434476 MYT1Q01538 1121 aa17.38■□□□□ 0.37
SCRN1-207ENST00000434476 SPATA31D1Q6ZQQ2 1576 aa17.38■□□□□ 0.37
SCRN1-207ENST00000434476 TSPOAP1O95153 1857 aa17.38■□□□□ 0.37
SCRN1-207ENST00000434476 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
SCRN1-207ENST00000434476 PTPRMP28827 1452 aa17.37■□□□□ 0.37
SCRN1-207ENST00000434476 ATAD2Q6PL18 1390 aa17.37■□□□□ 0.37
SCRN1-207ENST00000434476 APAF1O14727 1248 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 CABP2Q9NPB3 220 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 STK26Q9P289 416 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
SCRN1-207ENST00000434476 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
SCRN1-207ENST00000434476 POGKQ9P215 609 aa17.35■□□□□ 0.37
SCRN1-207ENST00000434476 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
SCRN1-207ENST00000434476 E9PSI1 815 aa17.34■□□□□ 0.37
SCRN1-207ENST00000434476 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
SCRN1-207ENST00000434476 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
SCRN1-207ENST00000434476 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
SCRN1-207ENST00000434476 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.37
SCRN1-207ENST00000434476 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.37
SCRN1-207ENST00000434476 PRAM1Q96QH2 718 aa17.33■□□□□ 0.37
SCRN1-207ENST00000434476 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.37
SCRN1-207ENST00000434476 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
SCRN1-207ENST00000434476 SRPK2P78362 688 aaKnown RBP17.32■□□□□ 0.36
SCRN1-207ENST00000434476 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
SCRN1-207ENST00000434476 MTHFSP49914 203 aa17.31■□□□□ 0.36
SCRN1-207ENST00000434476 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
SCRN1-207ENST00000434476 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
SCRN1-207ENST00000434476 HDGFP51858 240 aaKnown RBP17.31■□□□□ 0.36
SCRN1-207ENST00000434476 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
SCRN1-207ENST00000434476 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCRN1-207ENST00000434476 MED14O60244 1454 aa17.29■□□□□ 0.36
SCRN1-207ENST00000434476 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
SCRN1-207ENST00000434476 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
SCRN1-207ENST00000434476 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
SCRN1-207ENST00000434476 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
SCRN1-207ENST00000434476 PLIN1O60240 522 aa17.28■□□□□ 0.36
SCRN1-207ENST00000434476 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
SCRN1-207ENST00000434476 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
SCRN1-207ENST00000434476 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
SCRN1-207ENST00000434476 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-207ENST00000434476 MLECQ14165 292 aa17.27■□□□□ 0.36
SCRN1-207ENST00000434476 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-207ENST00000434476 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
SCRN1-207ENST00000434476 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
SCRN1-207ENST00000434476 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
SCRN1-207ENST00000434476 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
SCRN1-207ENST00000434476 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
SCRN1-207ENST00000434476 WDR63Q8IWG1 891 aa17.25■□□□□ 0.35
SCRN1-207ENST00000434476 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
SCRN1-207ENST00000434476 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
SCRN1-207ENST00000434476 FYB1O15117 783 aa17.23■□□□□ 0.35
SCRN1-207ENST00000434476 MS4A1P11836 297 aa17.23■□□□□ 0.35
SCRN1-207ENST00000434476 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
SCRN1-207ENST00000434476 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
SCRN1-207ENST00000434476 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
SCRN1-207ENST00000434476 TNRQ92752 1358 aa17.21■□□□□ 0.35
SCRN1-207ENST00000434476 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
SCRN1-207ENST00000434476 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
SCRN1-207ENST00000434476 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
SCRN1-207ENST00000434476 ATP7BP35670 1465 aa17.19■□□□□ 0.34
SCRN1-207ENST00000434476 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
SCRN1-207ENST00000434476 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
SCRN1-207ENST00000434476 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
SCRN1-207ENST00000434476 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
SCRN1-207ENST00000434476 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCRN1-207ENST00000434476 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
SCRN1-207ENST00000434476 PDE3AQ14432 1141 aa17.18■□□□□ 0.34
SCRN1-207ENST00000434476 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
SCRN1-207ENST00000434476 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
SCRN1-207ENST00000434476 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
SCRN1-207ENST00000434476 TECPR2O15040 1411 aa17.17■□□□□ 0.34
SCRN1-207ENST00000434476 MSH5O43196 834 aa17.17■□□□□ 0.34
SCRN1-207ENST00000434476 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
SCRN1-207ENST00000434476 PNPLA6Q8IY17 1366 aa17.16■□□□□ 0.34
SCRN1-207ENST00000434476 NRXN3Q9Y4C0 1643 aa17.16■□□□□ 0.34
SCRN1-207ENST00000434476 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
SCRN1-207ENST00000434476 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
SCRN1-207ENST00000434476 METP08581 1390 aa17.15■□□□□ 0.34
SCRN1-207ENST00000434476 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
SCRN1-207ENST00000434476 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
SCRN1-207ENST00000434476 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
SCRN1-207ENST00000434476 BCAR3O75815 825 aa17.13■□□□□ 0.33
SCRN1-207ENST00000434476 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
SCRN1-207ENST00000434476 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
SCRN1-207ENST00000434476 RRP7AQ9Y3A4 280 aaKnown RBP17.13■□□□□ 0.33
SCRN1-207ENST00000434476 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
SCRN1-207ENST00000434476 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
SCRN1-207ENST00000434476 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
SCRN1-207ENST00000434476 AAMPQ13685 434 aa17.12■□□□□ 0.33
SCRN1-207ENST00000434476 CPSF1Q10570 1443 aaKnown RBP17.12■□□□□ 0.33
SCRN1-207ENST00000434476 KNDC1Q76NI1 1749 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms