RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
RPUSD3-208ENST00000433972 ORAI2Q96SN7 254 aa22.03■■□□□ 1.12
RPUSD3-208ENST00000433972 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
RPUSD3-208ENST00000433972 ABCC11Q96J66 1382 aa22.01■■□□□ 1.11
RPUSD3-208ENST00000433972 PIK3C2GO75747 1445 aa22.01■■□□□ 1.11
RPUSD3-208ENST00000433972 ESCO1Q5FWF5 840 aa22■■□□□ 1.11
RPUSD3-208ENST00000433972 STK26Q9P289 416 aa22■■□□□ 1.11
RPUSD3-208ENST00000433972 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
RPUSD3-208ENST00000433972 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-208ENST00000433972 ADAMTS2O95450 1211 aa21.96■■□□□ 1.11
RPUSD3-208ENST00000433972 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
RPUSD3-208ENST00000433972 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
RPUSD3-208ENST00000433972 IFT172Q9UG01 1749 aa21.96■■□□□ 1.11
RPUSD3-208ENST00000433972 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
RPUSD3-208ENST00000433972 TMEM132EQ6IEE7 984 aa21.94■■□□□ 1.1
RPUSD3-208ENST00000433972 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
RPUSD3-208ENST00000433972 MYOM2P54296 1465 aa21.94■■□□□ 1.1
RPUSD3-208ENST00000433972 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
RPUSD3-208ENST00000433972 DHX57Q6P158 1386 aaKnown RBP21.93■■□□□ 1.1
RPUSD3-208ENST00000433972 UPF1Q92900 1129 aaKnown RBP eCLIP21.93■■□□□ 1.1
RPUSD3-208ENST00000433972 C14orf93Q9H972 538 aaKnown RBP21.93■■□□□ 1.1
RPUSD3-208ENST00000433972 RAB3GAP2Q9H2M9 1393 aa21.91■■□□□ 1.1
RPUSD3-208ENST00000433972 FOXO3O43524 673 aa21.91■■□□□ 1.1
RPUSD3-208ENST00000433972 USP21Q9UK80 565 aa21.9■■□□□ 1.1
RPUSD3-208ENST00000433972 TRPC5Q9UL62 973 aaPredicted RBP21.9■■□□□ 1.1
RPUSD3-208ENST00000433972 COL22A1Q8NFW1 1626 aaPredicted RBP21.9■■□□□ 1.1
RPUSD3-208ENST00000433972 PXDNQ92626 1479 aa21.9■■□□□ 1.1
RPUSD3-208ENST00000433972 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
RPUSD3-208ENST00000433972 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.09
RPUSD3-208ENST00000433972 PLEKHH1Q9ULM0 1364 aa21.88■■□□□ 1.09
RPUSD3-208ENST00000433972 NUTM2FA1L443 756 aa21.87■■□□□ 1.09
RPUSD3-208ENST00000433972 RGS12O14924 1447 aa21.87■■□□□ 1.09
RPUSD3-208ENST00000433972 CFAP70Q5T0N1 1121 aa21.86■■□□□ 1.09
RPUSD3-208ENST00000433972 STAC3Q96MF2 364 aa21.86■■□□□ 1.09
RPUSD3-208ENST00000433972 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
RPUSD3-208ENST00000433972 HRCP23327 699 aa21.83■■□□□ 1.09
RPUSD3-208ENST00000433972 XPCQ01831 940 aaPredicted RBP21.83■■□□□ 1.09
RPUSD3-208ENST00000433972 PSME1Q06323 249 aa21.83■■□□□ 1.09
RPUSD3-208ENST00000433972 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.08
RPUSD3-208ENST00000433972 POGKQ9P215 609 aa21.82■■□□□ 1.08
RPUSD3-208ENST00000433972 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
RPUSD3-208ENST00000433972 PHF8Q9UPP1 1060 aa21.81■■□□□ 1.08
RPUSD3-208ENST00000433972 ATAD2Q6PL18 1390 aa21.81■■□□□ 1.08
RPUSD3-208ENST00000433972 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
RPUSD3-208ENST00000433972 ATRNO75882 1429 aa21.8■■□□□ 1.08
RPUSD3-208ENST00000433972 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
RPUSD3-208ENST00000433972 KRT28Q7Z3Y7 464 aa21.8■■□□□ 1.08
RPUSD3-208ENST00000433972 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
RPUSD3-208ENST00000433972 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
RPUSD3-208ENST00000433972 HAP1P54257 671 aaPredicted RBP21.77■■□□□ 1.08
RPUSD3-208ENST00000433972 SAFB2Q14151 953 aaKnown RBP eCLIP21.76■■□□□ 1.07
RPUSD3-208ENST00000433972 TNS3Q68CZ2 1445 aa21.76■■□□□ 1.07
RPUSD3-208ENST00000433972 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
RPUSD3-208ENST00000433972 BCL9LQ86UU0 1499 aa21.75■■□□□ 1.07
RPUSD3-208ENST00000433972 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
RPUSD3-208ENST00000433972 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
RPUSD3-208ENST00000433972 UNC5CLQ8IV45 518 aa21.73■■□□□ 1.07
RPUSD3-208ENST00000433972 GJD4Q96KN9 370 aaPredicted RBP21.73■■□□□ 1.07
RPUSD3-208ENST00000433972 TRAK1Q9UPV9 953 aa21.72■■□□□ 1.07
RPUSD3-208ENST00000433972 KDM2AQ9Y2K7 1162 aa21.72■■□□□ 1.07
RPUSD3-208ENST00000433972 ADGRB1O14514 1584 aa21.72■■□□□ 1.07
RPUSD3-208ENST00000433972 ADGRB2O60241 1585 aa21.72■■□□□ 1.07
RPUSD3-208ENST00000433972 MARF1Q9Y4F3 1742 aaKnown RBP21.7■■□□□ 1.06
RPUSD3-208ENST00000433972 SLIT2O94813 1529 aa21.7■■□□□ 1.06
RPUSD3-208ENST00000433972 LMOD2Q6P5Q4 547 aa21.69■■□□□ 1.06
RPUSD3-208ENST00000433972 CCDC125Q86Z20 511 aa21.69■■□□□ 1.06
RPUSD3-208ENST00000433972 GPRASP1Q5JY77 1395 aa21.69■■□□□ 1.06
RPUSD3-208ENST00000433972 USP32Q8NFA0 1604 aa21.69■■□□□ 1.06
RPUSD3-208ENST00000433972 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-208ENST00000433972 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
RPUSD3-208ENST00000433972 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
RPUSD3-208ENST00000433972 WASLO00401 505 aaPredicted RBP21.65■■□□□ 1.06
RPUSD3-208ENST00000433972 HIRIP3Q9BW71 556 aaPredicted RBP21.65■■□□□ 1.06
RPUSD3-208ENST00000433972 TULP4Q9NRJ4 1543 aa21.65■■□□□ 1.06
RPUSD3-208ENST00000433972 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.05
RPUSD3-208ENST00000433972 VPS72Q15906 364 aa21.62■■□□□ 1.05
RPUSD3-208ENST00000433972 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
RPUSD3-208ENST00000433972 CABLES1Q8TDN4 633 aa21.61■■□□□ 1.05
RPUSD3-208ENST00000433972 CCDC9Q9Y3X0 531 aaKnown RBP21.6■■□□□ 1.05
RPUSD3-208ENST00000433972 RGPD8O14715 1765 aaPredicted RBP21.6■■□□□ 1.05
RPUSD3-208ENST00000433972 PLEKHG5O94827 1062 aa21.58■■□□□ 1.05
RPUSD3-208ENST00000433972 PRR36Q9H6K5 1346 aa21.57■■□□□ 1.04
RPUSD3-208ENST00000433972 NWD2Q9ULI1 1742 aa21.57■■□□□ 1.04
RPUSD3-208ENST00000433972 GLI3P10071 1580 aa21.57■■□□□ 1.04
RPUSD3-208ENST00000433972 ZRANB1Q9UGI0 708 aa21.56■■□□□ 1.04
RPUSD3-208ENST00000433972 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
RPUSD3-208ENST00000433972 EP400Q96L91 3159 aa21.54■■□□□ 1.04
RPUSD3-208ENST00000433972 FAM83GA6ND36 823 aa21.54■■□□□ 1.04
RPUSD3-208ENST00000433972 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-208ENST00000433972 SF3B2Q13435 895 aaKnown RBP21.54■■□□□ 1.04
RPUSD3-208ENST00000433972 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
RPUSD3-208ENST00000433972 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
RPUSD3-208ENST00000433972 ONECUT3O60422 494 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-208ENST00000433972 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-208ENST00000433972 PLCH1Q4KWH8 1693 aa21.53■■□□□ 1.04
RPUSD3-208ENST00000433972 ATP7BP35670 1465 aa21.52■■□□□ 1.04
RPUSD3-208ENST00000433972 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.04
RPUSD3-208ENST00000433972 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.03
RPUSD3-208ENST00000433972 BTG4Q9NY30 223 aa21.51■■□□□ 1.03
RPUSD3-208ENST00000433972 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms