RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
TNFAIP3-204ENST00000433680 ATF3P18847 181 aa20.95■□□□□ 0.94
TNFAIP3-204ENST00000433680 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
TNFAIP3-204ENST00000433680 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
TNFAIP3-204ENST00000433680 POGKQ9P215 609 aa20.95■□□□□ 0.94
TNFAIP3-204ENST00000433680 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
TNFAIP3-204ENST00000433680 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
TNFAIP3-204ENST00000433680 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
TNFAIP3-204ENST00000433680 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
TNFAIP3-204ENST00000433680 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
TNFAIP3-204ENST00000433680 SLAIN2Q9P270 581 aa20.88■□□□□ 0.93
TNFAIP3-204ENST00000433680 CENPJQ9HC77 1338 aaPredicted RBP20.87■□□□□ 0.93
TNFAIP3-204ENST00000433680 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
TNFAIP3-204ENST00000433680 QRICH2Q9H0J4 1663 aa20.85■□□□□ 0.93
TNFAIP3-204ENST00000433680 MST1RQ04912 1400 aa20.85■□□□□ 0.93
TNFAIP3-204ENST00000433680 FMN2Q9NZ56 1722 aa20.84■□□□□ 0.93
TNFAIP3-204ENST00000433680 PIP4K2BP78356 416 aa20.84■□□□□ 0.93
TNFAIP3-204ENST00000433680 MINK1Q8N4C8 1332 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP3-204ENST00000433680 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
TNFAIP3-204ENST00000433680 ROBO1Q9Y6N7 1651 aa20.81■□□□□ 0.92
TNFAIP3-204ENST00000433680 C1orf167Q5SNV9 1468 aa20.81■□□□□ 0.92
TNFAIP3-204ENST00000433680 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
TNFAIP3-204ENST00000433680 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
TNFAIP3-204ENST00000433680 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
TNFAIP3-204ENST00000433680 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
TNFAIP3-204ENST00000433680 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
TNFAIP3-204ENST00000433680 TULP4Q9NRJ4 1543 aa20.77■□□□□ 0.92
TNFAIP3-204ENST00000433680 USP47Q96K76 1375 aa20.76■□□□□ 0.91
TNFAIP3-204ENST00000433680 BRINP3Q76B58 766 aa20.75■□□□□ 0.91
TNFAIP3-204ENST00000433680 ILDR1Q86SU0 546 aaPredicted RBP20.75■□□□□ 0.91
TNFAIP3-204ENST00000433680 CDK19Q9BWU1 502 aa20.74■□□□□ 0.91
TNFAIP3-204ENST00000433680 EVC2Q86UK5 1308 aa20.74■□□□□ 0.91
TNFAIP3-204ENST00000433680 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
TNFAIP3-204ENST00000433680 KIF1AQ12756 1690 aa20.73■□□□□ 0.91
TNFAIP3-204ENST00000433680 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
TNFAIP3-204ENST00000433680 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
TNFAIP3-204ENST00000433680 NUTM2FA1L443 756 aa20.72■□□□□ 0.91
TNFAIP3-204ENST00000433680 ESCO1Q5FWF5 840 aa20.72■□□□□ 0.91
TNFAIP3-204ENST00000433680 ITSN1Q15811 1721 aa20.72■□□□□ 0.91
TNFAIP3-204ENST00000433680 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
TNFAIP3-204ENST00000433680 ORAI2Q96SN7 254 aa20.71■□□□□ 0.91
TNFAIP3-204ENST00000433680 NHSL1Q5SYE7 1610 aa20.71■□□□□ 0.91
TNFAIP3-204ENST00000433680 PHLPP1O60346 1717 aa20.7■□□□□ 0.9
TNFAIP3-204ENST00000433680 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.93e-7■■■■■ 30.4
TNFAIP3-204ENST00000433680 SRPK2P78362 688 aaKnown RBP20.69■□□□□ 0.9
TNFAIP3-204ENST00000433680 NUDT16Q96DE0 195 aaKnown RBP20.69■□□□□ 0.9
TNFAIP3-204ENST00000433680 ATP7BP35670 1465 aa20.69■□□□□ 0.9
TNFAIP3-204ENST00000433680 TESK2Q96S53 571 aa20.68■□□□□ 0.9
TNFAIP3-204ENST00000433680 HSPA1LP34931 641 aa20.67■□□□□ 0.9
TNFAIP3-204ENST00000433680 PHF8Q9UPP1 1060 aa20.67■□□□□ 0.9
TNFAIP3-204ENST00000433680 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
TNFAIP3-204ENST00000433680 TOPAZ1Q8N9V7 1692 aa20.67■□□□□ 0.9
TNFAIP3-204ENST00000433680 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
TNFAIP3-204ENST00000433680 PUS7Q96PZ0 661 aaKnown RBP20.66■□□□□ 0.9
TNFAIP3-204ENST00000433680 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
TNFAIP3-204ENST00000433680 NPHP3Q7Z494 1330 aa20.65■□□□□ 0.9
TNFAIP3-204ENST00000433680 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
TNFAIP3-204ENST00000433680 COL16A1Q07092 1604 aaPredicted RBP20.64■□□□□ 0.89
TNFAIP3-204ENST00000433680 ATAD2Q6PL18 1390 aa20.63■□□□□ 0.89
TNFAIP3-204ENST00000433680 TMF1P82094 1093 aa20.63■□□□□ 0.89
TNFAIP3-204ENST00000433680 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 PLEKHG3A1L390 1219 aa20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 FOXO3O43524 673 aa20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
TNFAIP3-204ENST00000433680 PMFBP1Q8TBY8 1022 aa20.6■□□□□ 0.89
TNFAIP3-204ENST00000433680 PXDNQ92626 1479 aa20.59■□□□□ 0.89
TNFAIP3-204ENST00000433680 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
TNFAIP3-204ENST00000433680 PSME1Q06323 249 aa20.58■□□□□ 0.89
TNFAIP3-204ENST00000433680 NGDNQ8NEJ9 315 aaKnown RBP20.58■□□□□ 0.89
TNFAIP3-204ENST00000433680 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
TNFAIP3-204ENST00000433680 POLR3AO14802 1390 aaPredicted RBP20.58■□□□□ 0.88
TNFAIP3-204ENST00000433680 KRT28Q7Z3Y7 464 aa20.57■□□□□ 0.88
TNFAIP3-204ENST00000433680 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
TNFAIP3-204ENST00000433680 JCADQ9P266 1359 aa20.56■□□□□ 0.88
TNFAIP3-204ENST00000433680 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
TNFAIP3-204ENST00000433680 ACEP12821 1306 aa20.55■□□□□ 0.88
TNFAIP3-204ENST00000433680 SHPRHQ149N8 1683 aa20.55■□□□□ 0.88
TNFAIP3-204ENST00000433680 NINLQ9Y2I6 1382 aa20.55■□□□□ 0.88
TNFAIP3-204ENST00000433680 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
TNFAIP3-204ENST00000433680 BRD4O60885 1362 aaPredicted RBP20.53■□□□□ 0.88
TNFAIP3-204ENST00000433680 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
TNFAIP3-204ENST00000433680 TRPM3Q9HCF6 1732 aaPredicted RBP20.51■□□□□ 0.87
TNFAIP3-204ENST00000433680 XPCQ01831 940 aaPredicted RBP20.51■□□□□ 0.87
TNFAIP3-204ENST00000433680 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
TNFAIP3-204ENST00000433680 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
TNFAIP3-204ENST00000433680 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
TNFAIP3-204ENST00000433680 CPSF1Q10570 1443 aaKnown RBP20.49■□□□□ 0.87
TNFAIP3-204ENST00000433680 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
TNFAIP3-204ENST00000433680 SPATA31A6Q5VVP1 1343 aa20.49■□□□□ 0.87
TNFAIP3-204ENST00000433680 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
TNFAIP3-204ENST00000433680 PNPLA6Q8IY17 1366 aa20.48■□□□□ 0.87
TNFAIP3-204ENST00000433680 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
TNFAIP3-204ENST00000433680 ARHGEF10O15013 1369 aa20.47■□□□□ 0.87
TNFAIP3-204ENST00000433680 USP6P35125 1406 aa20.47■□□□□ 0.87
TNFAIP3-204ENST00000433680 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
TNFAIP3-204ENST00000433680 ALS2Q96Q42 1657 aa20.47■□□□□ 0.87
TNFAIP3-204ENST00000433680 SLC12A5Q9H2X9 1139 aa20.46■□□□□ 0.87
TNFAIP3-204ENST00000433680 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms