RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 WDR7Q9Y4E6 1490 aa15.7■□□□□ 0.1
LRRTM1-206ENST00000433224 KCNJ4P48050 445 aa15.69■□□□□ 0.1
LRRTM1-206ENST00000433224 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
LRRTM1-206ENST00000433224 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
LRRTM1-206ENST00000433224 NLRP2Q9NX02 1062 aa15.69■□□□□ 0.1
LRRTM1-206ENST00000433224 CASC1Q6TDU7 716 aa15.69■□□□□ 0.1
LRRTM1-206ENST00000433224 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 C20orf194Q5TEA3 1177 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 EMILIN1Q9Y6C2 1016 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 PZPP20742 1482 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
LRRTM1-206ENST00000433224 ATF3P18847 181 aa15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 TESK2Q96S53 571 aa15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 FAM161AQ3B820 660 aa15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
LRRTM1-206ENST00000433224 C1orf115Q9H7X2 142 aa15.66■□□□□ 0.1
LRRTM1-206ENST00000433224 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
LRRTM1-206ENST00000433224 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
LRRTM1-206ENST00000433224 FAM135AQ9P2D6 1515 aa15.66■□□□□ 0.1
LRRTM1-206ENST00000433224 NOL8Q76FK4 1167 aaKnown RBP15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 LNPKQ9C0E8 428 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 NAP1L2Q9ULW6 460 aaPredicted RBP15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 AMOTL2Q9Y2J4 779 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 TRIM6-TRIM34B2RNG4 842 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 NFKBIBQ15653 356 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 EVA1CP58658 441 aa15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 FKBP5Q13451 457 aaPredicted RBP15.65■□□□□ 0.1
LRRTM1-206ENST00000433224 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
LRRTM1-206ENST00000433224 A2MP01023 1474 aa15.64■□□□□ 0.09
LRRTM1-206ENST00000433224 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
LRRTM1-206ENST00000433224 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
LRRTM1-206ENST00000433224 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
LRRTM1-206ENST00000433224 FOXO3O43524 673 aa15.63■□□□□ 0.09
LRRTM1-206ENST00000433224 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
LRRTM1-206ENST00000433224 ABCC2Q92887 1545 aa15.62■□□□□ 0.09
LRRTM1-206ENST00000433224 AIMP1Q12904 312 aaKnown RBP15.62■□□□□ 0.09
LRRTM1-206ENST00000433224 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 GOLGA6L22H0YM25 854 aa15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 BACH2Q9BYV9 841 aa15.61■□□□□ 0.09
LRRTM1-206ENST00000433224 L1TD1Q5T7N2 865 aaKnown RBP15.6■□□□□ 0.09
LRRTM1-206ENST00000433224 KDM6BO15054 1643 aa15.6■□□□□ 0.09
LRRTM1-206ENST00000433224 GNAI1P63096 354 aa15.6■□□□□ 0.09
LRRTM1-206ENST00000433224 FGD1P98174 961 aa15.6■□□□□ 0.09
LRRTM1-206ENST00000433224 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
LRRTM1-206ENST00000433224 CARD14Q9BXL6 1004 aa15.59■□□□□ 0.09
LRRTM1-206ENST00000433224 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
LRRTM1-206ENST00000433224 MCM10Q7L590 875 aa15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 NOB1Q9ULX3 412 aaKnown RBP15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 SCAF11Q99590 1463 aaKnown RBP15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 STRN4Q9NRL3 753 aa15.58■□□□□ 0.08
LRRTM1-206ENST00000433224 DUOX2Q9NRD8 1548 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 TWISTNBQ3B726 338 aaPredicted RBP15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
LRRTM1-206ENST00000433224 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
LRRTM1-206ENST00000433224 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
LRRTM1-206ENST00000433224 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
LRRTM1-206ENST00000433224 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
LRRTM1-206ENST00000433224 HMMRO75330 724 aa15.55■□□□□ 0.08
LRRTM1-206ENST00000433224 DNMT1P26358 1616 aaKnown RBP15.55■□□□□ 0.08
LRRTM1-206ENST00000433224 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
LRRTM1-206ENST00000433224 FAM83GA6ND36 823 aa15.54■□□□□ 0.08
LRRTM1-206ENST00000433224 FOXD4L5Q5VV16 416 aaPredicted RBP15.54■□□□□ 0.08
LRRTM1-206ENST00000433224 FOXD4L4Q8WXT5 416 aaPredicted RBP15.54■□□□□ 0.08
LRRTM1-206ENST00000433224 GOLGA6L3A6NEY3 463 aa15.53■□□□□ 0.08
LRRTM1-206ENST00000433224 FYB1O15117 783 aa15.53■□□□□ 0.08
LRRTM1-206ENST00000433224 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
LRRTM1-206ENST00000433224 C9orf78Q9NZ63 289 aaPredicted RBP15.53■□□□□ 0.08
LRRTM1-206ENST00000433224 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
LRRTM1-206ENST00000433224 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
LRRTM1-206ENST00000433224 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.08
LRRTM1-206ENST00000433224 MBD5Q9P267 1494 aa15.51■□□□□ 0.07
LRRTM1-206ENST00000433224 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
LRRTM1-206ENST00000433224 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
LRRTM1-206ENST00000433224 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
LRRTM1-206ENST00000433224 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 POGZQ7Z3K3 1410 aa15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 PTMAP06454 111 aaKnown RBP15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 FOXD4L6Q3SYB3 417 aaPredicted RBP15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 FOXD4L3Q6VB84 417 aaPredicted RBP15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 HSP90AB2PQ58FF8 381 aa15.5■□□□□ 0.07
LRRTM1-206ENST00000433224 ACEP12821 1306 aa15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 GORABQ5T7V8 394 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms