RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 CCDC184Q52MB2 194 aa12.58□□□□□ -0.39
PKNOX1-203ENST00000432907 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.39
PKNOX1-203ENST00000432907 DYNC1I1O14576 645 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 ERCC4Q92889 916 aaPredicted RBP12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 SOX12O15370 315 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 RABEP1Q15276 862 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 SKIDA1Q1XH10 827 aa12.58□□□□□ -0.4
PKNOX1-203ENST00000432907 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-203ENST00000432907 HDGFL2Q7Z4V5 671 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-203ENST00000432907 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
PKNOX1-203ENST00000432907 CCDC73Q6ZRK6 1079 aa12.57□□□□□ -0.4
PKNOX1-203ENST00000432907 RASSF8Q8NHQ8 419 aa12.57□□□□□ -0.4
PKNOX1-203ENST00000432907 USP8P40818 1118 aa12.56□□□□□ -0.4
PKNOX1-203ENST00000432907 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
PKNOX1-203ENST00000432907 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
PKNOX1-203ENST00000432907 KANK1Q14678 1352 aa12.55□□□□□ -0.4
PKNOX1-203ENST00000432907 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
PKNOX1-203ENST00000432907 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
PKNOX1-203ENST00000432907 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
PKNOX1-203ENST00000432907 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
PKNOX1-203ENST00000432907 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 NEK4P51957 841 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 FIBPO43427 364 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
PKNOX1-203ENST00000432907 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 SYCE3A1L190 88 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 CDR1P51861 262 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 CCP110O43303 1012 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 AXDND1Q5T1B0 1012 aaPredicted RBP12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 HDAC5Q9UQL6 1122 aa12.53□□□□□ -0.4
PKNOX1-203ENST00000432907 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-203ENST00000432907 MCM2P49736 904 aa12.52□□□□□ -0.41
PKNOX1-203ENST00000432907 RRP12Q5JTH9 1297 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-203ENST00000432907 TIGD1Q96MW7 591 aa12.52□□□□□ -0.41
PKNOX1-203ENST00000432907 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
PKNOX1-203ENST00000432907 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 PDILTQ8N807 584 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 CUL7Q14999 1698 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 SMC2O95347 1197 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 MCM5P33992 734 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
PKNOX1-203ENST00000432907 BCAR3O75815 825 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 EIF3JO75822 258 aaKnown RBP12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 STK26Q9P289 416 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 TBC1D2Q9BYX2 928 aa12.5□□□□□ -0.41
PKNOX1-203ENST00000432907 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
PKNOX1-203ENST00000432907 DNAJC2Q99543 621 aaKnown RBP12.49□□□□□ -0.41
PKNOX1-203ENST00000432907 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
PKNOX1-203ENST00000432907 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
PKNOX1-203ENST00000432907 UBXN4Q92575 508 aa12.49□□□□□ -0.41
PKNOX1-203ENST00000432907 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.414e-7■■■■■ 27
PKNOX1-203ENST00000432907 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 PLCD4Q9BRC7 762 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 GTPBP4Q9BZE4 634 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 CEP89Q96ST8 783 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 HOOK1Q9UJC3 728 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
PKNOX1-203ENST00000432907 ERLIN1O75477 346 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 CAGE1Q8TC20 777 aa12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
PKNOX1-203ENST00000432907 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-203ENST00000432907 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
PKNOX1-203ENST00000432907 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.41
PKNOX1-203ENST00000432907 UACAQ9BZF9 1416 aa12.46□□□□□ -0.41
PKNOX1-203ENST00000432907 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.41
PKNOX1-203ENST00000432907 PRG4Q92954 1404 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms