RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 MYOM2P54296 1465 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
LINC00390-201ENST00000432331 ZBTB22O15209 634 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 IDI1Q13907 227 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 L3MBTL2Q969R5 705 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 TMEM131LA2VDJ0 1609 aa8.89□□□□□ -0.99
LINC00390-201ENST00000432331 CEP170BQ9Y4F5 1589 aaPredicted RBP8.89□□□□□ -0.99
LINC00390-201ENST00000432331 UHRF1BP1Q6BDS2 1440 aa8.88□□□□□ -0.99
LINC00390-201ENST00000432331 RGL3Q3MIN7 710 aa8.88□□□□□ -0.99
LINC00390-201ENST00000432331 UTP14CQ5TAP6 766 aaKnown RBP8.88□□□□□ -0.99
LINC00390-201ENST00000432331 RRAGDQ9NQL2 400 aaPredicted RBP8.88□□□□□ -0.99
LINC00390-201ENST00000432331 KIF1BO60333 1816 aa8.88□□□□□ -0.99
LINC00390-201ENST00000432331 ZNF142P52746 1687 aaPredicted RBP8.88□□□□□ -0.99
LINC00390-201ENST00000432331 RPGRIP1LQ68CZ1 1315 aa8.87□□□□□ -0.99
LINC00390-201ENST00000432331 NEXMIFQ5QGS0 1516 aa8.87□□□□□ -0.99
LINC00390-201ENST00000432331 PDE4AP27815 886 aa8.87□□□□□ -0.99
LINC00390-201ENST00000432331 CNGB1Q14028 1251 aaPredicted RBP8.87□□□□□ -0.99
LINC00390-201ENST00000432331 IPO4Q8TEX9 1081 aaKnown RBP8.87□□□□□ -0.99
LINC00390-201ENST00000432331 STAC3Q96MF2 364 aa8.87□□□□□ -0.99
LINC00390-201ENST00000432331 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
LINC00390-201ENST00000432331 KDM4FA0A1W2PPD8 638 aa8.86□□□□□ -0.99
LINC00390-201ENST00000432331 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
LINC00390-201ENST00000432331 NUDCQ9Y266 331 aa8.86□□□□□ -0.99
LINC00390-201ENST00000432331 PRAG1Q86YV5 1406 aa8.86□□□□□ -0.99
LINC00390-201ENST00000432331 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
LINC00390-201ENST00000432331 MYCNP04198 464 aaPredicted RBP8.85□□□□□ -0.99
LINC00390-201ENST00000432331 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
LINC00390-201ENST00000432331 ZFYVE9O95405 1425 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 RIMS2Q9UQ26 1411 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 IFT172Q9UG01 1749 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 TMEM2Q9UHN6 1383 aa8.85□□□□□ -0.99
LINC00390-201ENST00000432331 NRXN1Q9ULB1 1477 aa8.84□□□□□ -0.99
LINC00390-201ENST00000432331 PIK3C2GO75747 1445 aa8.84□□□□□ -0.99
LINC00390-201ENST00000432331 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
LINC00390-201ENST00000432331 SLIT1O75093 1534 aa8.84□□□□□ -0.99
LINC00390-201ENST00000432331 ARHGAP23Q9P227 1491 aa8.83□□□□□ -1
LINC00390-201ENST00000432331 THEMISQ8N1K5 641 aaPredicted RBP8.83□□□□□ -1
LINC00390-201ENST00000432331 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00390-201ENST00000432331 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
LINC00390-201ENST00000432331 PPLO60437 1756 aa8.83□□□□□ -1
LINC00390-201ENST00000432331 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
LINC00390-201ENST00000432331 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
LINC00390-201ENST00000432331 NAP1L2Q9ULW6 460 aaPredicted RBP8.82□□□□□ -1
LINC00390-201ENST00000432331 LAMC1P11047 1609 aa8.82□□□□□ -1
LINC00390-201ENST00000432331 SCAF11Q99590 1463 aaKnown RBP8.82□□□□□ -1
LINC00390-201ENST00000432331 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
LINC00390-201ENST00000432331 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
LINC00390-201ENST00000432331 EID1Q9Y6B2 187 aa8.81□□□□□ -1
LINC00390-201ENST00000432331 ROCK2O75116 1388 aaKnown RBP8.81□□□□□ -1
LINC00390-201ENST00000432331 ADGRF5Q8IZF2 1346 aa8.8□□□□□ -1
LINC00390-201ENST00000432331 TRPM1Q7Z4N2 1603 aa8.8□□□□□ -1
LINC00390-201ENST00000432331 CFAP65Q6ZU64 1925 aaKnown RBP8.8□□□□□ -1
LINC00390-201ENST00000432331 PLEKHG1Q9ULL1 1385 aa8.8□□□□□ -1
LINC00390-201ENST00000432331 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
LINC00390-201ENST00000432331 SETBP1Q9Y6X0 1596 aa8.8□□□□□ -1
LINC00390-201ENST00000432331 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
LINC00390-201ENST00000432331 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
LINC00390-201ENST00000432331 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
LINC00390-201ENST00000432331 BBXQ8WY36 941 aaPredicted RBP8.79□□□□□ -1
LINC00390-201ENST00000432331 ANP32BQ92688 251 aaKnown RBP8.79□□□□□ -1
LINC00390-201ENST00000432331 KIAA1210Q9ULL0 1709 aa8.79□□□□□ -1
LINC00390-201ENST00000432331 DIP2AQ14689 1571 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 MYO5BQ9ULV0 1848 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 FSD2A1L4K1 749 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 GOLGA6L3A6NEY3 463 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 KIF20AO95235 890 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 BRD2P25440 801 aaKnown RBP8.78□□□□□ -1
LINC00390-201ENST00000432331 MRE11P49959 708 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
LINC00390-201ENST00000432331 SAMD1Q6SPF0 538 aaPredicted RBP8.78□□□□□ -1
LINC00390-201ENST00000432331 TXNDC2Q86VQ3 553 aa8.78□□□□□ -1
LINC00390-201ENST00000432331 CAPN15O75808 1086 aa8.77□□□□□ -1.01
LINC00390-201ENST00000432331 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.77□□□□□ -1.01
LINC00390-201ENST00000432331 TRIM44Q96DX7 344 aaPredicted RBP8.77□□□□□ -1.01
LINC00390-201ENST00000432331 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
LINC00390-201ENST00000432331 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
LINC00390-201ENST00000432331 USP47Q96K76 1375 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 ESPNB1AK53 854 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
LINC00390-201ENST00000432331 ANKLE2Q86XL3 938 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 C14orf93Q9H972 538 aaKnown RBP8.76□□□□□ -1.01
LINC00390-201ENST00000432331 ADGRB1O14514 1584 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 ALKQ9UM73 1620 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
LINC00390-201ENST00000432331 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 ASXL1Q8IXJ9 1541 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 NPHP4O75161 1426 aaPredicted RBP8.75□□□□□ -1.01
LINC00390-201ENST00000432331 LTKP29376 864 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 RGS3P49796 1198 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 DMTNQ08495 405 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 CFAP70Q5T0N1 1121 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 GTPBP4Q9BZE4 634 aaKnown RBP8.75□□□□□ -1.01
LINC00390-201ENST00000432331 MED14O60244 1454 aa8.75□□□□□ -1.01
LINC00390-201ENST00000432331 ADAMTS13Q76LX8 1427 aa8.74□□□□□ -1.01
LINC00390-201ENST00000432331 SETD1BQ9UPS6 1966 aaKnown RBP8.74□□□□□ -1.01
LINC00390-201ENST00000432331 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
LINC00390-201ENST00000432331 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms