RNA–Protein interactions for RNA: ENST00000431505.6

RHBDL3-202, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-202ENST00000431505 C14orf93Q9H972 538 aaKnown RBP27.79■■■□□ 2.04
RHBDL3-202ENST00000431505 MYOM2P54296 1465 aa27.78■■■□□ 2.04
RHBDL3-202ENST00000431505 NRXN1Q9ULB1 1477 aa27.78■■■□□ 2.04
RHBDL3-202ENST00000431505 KNDC1Q76NI1 1749 aa27.78■■■□□ 2.04
RHBDL3-202ENST00000431505 LRP6O75581 1613 aa27.78■■■□□ 2.04
RHBDL3-202ENST00000431505 YTHDC2Q9H6S0 1430 aaKnown RBP27.77■■■□□ 2.04
RHBDL3-202ENST00000431505 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
RHBDL3-202ENST00000431505 LAMC1P11047 1609 aa27.76■■■□□ 2.03
RHBDL3-202ENST00000431505 CDC42BPGQ6DT37 1551 aa27.76■■■□□ 2.03
RHBDL3-202ENST00000431505 ZNF772Q68DY9 489 aaPredicted RBP27.75■■■□□ 2.03
RHBDL3-202ENST00000431505 ESCO1Q5FWF5 840 aa27.74■■■□□ 2.03
RHBDL3-202ENST00000431505 CFAP70Q5T0N1 1121 aa27.74■■■□□ 2.03
RHBDL3-202ENST00000431505 SIRT1Q96EB6 747 aa27.73■■■□□ 2.03
RHBDL3-202ENST00000431505 PNPLA6Q8IY17 1366 aa27.71■■■□□ 2.03
RHBDL3-202ENST00000431505 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.02
RHBDL3-202ENST00000431505 STAC3Q96MF2 364 aa27.7■■■□□ 2.02
RHBDL3-202ENST00000431505 KDM2AQ9Y2K7 1162 aa27.7■■■□□ 2.02
RHBDL3-202ENST00000431505 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
RHBDL3-202ENST00000431505 PLEKHH1Q9ULM0 1364 aa27.69■■■□□ 2.02
RHBDL3-202ENST00000431505 NPHP3Q7Z494 1330 aa27.68■■■□□ 2.02
RHBDL3-202ENST00000431505 NUTM2FA1L443 756 aa27.68■■■□□ 2.02
RHBDL3-202ENST00000431505 POGKQ9P215 609 aa27.64■■■□□ 2.02
RHBDL3-202ENST00000431505 FOXO3O43524 673 aa27.63■■■□□ 2.01
RHBDL3-202ENST00000431505 C8orf37Q96NL8 207 aa27.62■■■□□ 2.01
RHBDL3-202ENST00000431505 PRAM1Q96QH2 718 aa27.62■■■□□ 2.01
RHBDL3-202ENST00000431505 AFF2P51816 1311 aa27.62■■■□□ 2.01
RHBDL3-202ENST00000431505 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
RHBDL3-202ENST00000431505 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
RHBDL3-202ENST00000431505 RXRBP28702 533 aa27.59■■■□□ 2.01
RHBDL3-202ENST00000431505 DLC1Q96QB1 1528 aa27.58■■■□□ 2.01
RHBDL3-202ENST00000431505 ADAMTS2O95450 1211 aa27.58■■■□□ 2.01
RHBDL3-202ENST00000431505 NGLY1Q96IV0 654 aa27.57■■■□□ 2
RHBDL3-202ENST00000431505 TRAK1Q9UPV9 953 aa27.57■■■□□ 2
RHBDL3-202ENST00000431505 XPCQ01831 940 aaPredicted RBP27.56■■■□□ 2
RHBDL3-202ENST00000431505 KIF1AQ12756 1690 aa27.56■■■□□ 2
RHBDL3-202ENST00000431505 PXDNQ92626 1479 aa27.55■■■□□ 2
RHBDL3-202ENST00000431505 ADGRB1O14514 1584 aa27.55■■■□□ 2
RHBDL3-202ENST00000431505 RGPD8O14715 1765 aaPredicted RBP27.53■■■□□ 2
RHBDL3-202ENST00000431505 COL22A1Q8NFW1 1626 aaPredicted RBP27.52■■■□□ 2
RHBDL3-202ENST00000431505 QTRT2Q9H974 415 aaKnown RBP27.52■■■□□ 2
RHBDL3-202ENST00000431505 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
RHBDL3-202ENST00000431505 PSME1Q06323 249 aa27.5■■□□□ 1.99
RHBDL3-202ENST00000431505 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
RHBDL3-202ENST00000431505 MINK1Q8N4C8 1332 aaPredicted RBP27.46■■□□□ 1.99
RHBDL3-202ENST00000431505 HIRIP3Q9BW71 556 aaPredicted RBP27.46■■□□□ 1.99
RHBDL3-202ENST00000431505 SPATA31A3Q5VYP0 1347 aa27.45■■□□□ 1.99
RHBDL3-202ENST00000431505 ADGRB2O60241 1585 aa27.45■■□□□ 1.99
RHBDL3-202ENST00000431505 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
RHBDL3-202ENST00000431505 RBM6P78332 1123 aaKnown RBP27.45■■□□□ 1.98
RHBDL3-202ENST00000431505 USP21Q9UK80 565 aa27.45■■□□□ 1.98
RHBDL3-202ENST00000431505 EIF3AQ14152 1382 aaKnown RBP27.45■■□□□ 1.98
RHBDL3-202ENST00000431505 CDK12Q9NYV4 1490 aaPredicted RBP27.44■■□□□ 1.98
RHBDL3-202ENST00000431505 FNBP4Q8N3X1 1017 aaPredicted RBP27.41■■□□□ 1.98
RHBDL3-202ENST00000431505 PMFBP1Q8TBY8 1022 aa27.41■■□□□ 1.98
RHBDL3-202ENST00000431505 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
RHBDL3-202ENST00000431505 MARF1Q9Y4F3 1742 aaKnown RBP27.41■■□□□ 1.98
RHBDL3-202ENST00000431505 WASLO00401 505 aaPredicted RBP27.4■■□□□ 1.98
RHBDL3-202ENST00000431505 HAP1P54257 671 aaPredicted RBP27.4■■□□□ 1.98
RHBDL3-202ENST00000431505 LMOD2Q6P5Q4 547 aa27.39■■□□□ 1.98
RHBDL3-202ENST00000431505 KIAA1210Q9ULL0 1709 aa27.38■■□□□ 1.97
RHBDL3-202ENST00000431505 TNS3Q68CZ2 1445 aa27.38■■□□□ 1.97
RHBDL3-202ENST00000431505 ARHGEF28Q8N1W1 1705 aaKnown RBP27.38■■□□□ 1.97
RHBDL3-202ENST00000431505 USP32Q8NFA0 1604 aa27.37■■□□□ 1.97
RHBDL3-202ENST00000431505 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
RHBDL3-202ENST00000431505 TULP4Q9NRJ4 1543 aa27.36■■□□□ 1.97
RHBDL3-202ENST00000431505 ARHGEF10O15013 1369 aa27.35■■□□□ 1.97
RHBDL3-202ENST00000431505 GPRASP1Q5JY77 1395 aa27.35■■□□□ 1.97
RHBDL3-202ENST00000431505 PLEKHG5O94827 1062 aa27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 NGDNQ8NEJ9 315 aaKnown RBP27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 UPF1Q92900 1129 aaKnown RBP eCLIP27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 L3MBTL2Q969R5 705 aa27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 RGS12O14924 1447 aa27.31■■□□□ 1.96
RHBDL3-202ENST00000431505 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
RHBDL3-202ENST00000431505 PRR36Q9H6K5 1346 aa27.3■■□□□ 1.96
RHBDL3-202ENST00000431505 ATRNO75882 1429 aa27.3■■□□□ 1.96
RHBDL3-202ENST00000431505 ITSN1Q15811 1721 aa27.28■■□□□ 1.96
RHBDL3-202ENST00000431505 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
RHBDL3-202ENST00000431505 BCL9LQ86UU0 1499 aa27.27■■□□□ 1.96
RHBDL3-202ENST00000431505 NEUROD1Q13562 356 aa27.27■■□□□ 1.96
RHBDL3-202ENST00000431505 NUDT16Q96DE0 195 aaKnown RBP27.27■■□□□ 1.96
RHBDL3-202ENST00000431505 CDK19Q9BWU1 502 aa27.27■■□□□ 1.96
RHBDL3-202ENST00000431505 UNC5CLQ8IV45 518 aa27.26■■□□□ 1.95
RHBDL3-202ENST00000431505 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
RHBDL3-202ENST00000431505 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
RHBDL3-202ENST00000431505 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.24■■□□□ 1.95
RHBDL3-202ENST00000431505 GJD4Q96KN9 370 aaPredicted RBP27.23■■□□□ 1.95
RHBDL3-202ENST00000431505 TRPM3Q9HCF6 1732 aaPredicted RBP27.23■■□□□ 1.95
RHBDL3-202ENST00000431505 SLIT2O94813 1529 aa27.21■■□□□ 1.95
RHBDL3-202ENST00000431505 ATP7BP35670 1465 aa27.21■■□□□ 1.95
RHBDL3-202ENST00000431505 CENPJQ9HC77 1338 aaPredicted RBP27.2■■□□□ 1.95
RHBDL3-202ENST00000431505 ABCA3Q99758 1704 aa27.19■■□□□ 1.94
RHBDL3-202ENST00000431505 CCDC61Q9Y6R9 512 aa27.19■■□□□ 1.94
RHBDL3-202ENST00000431505 ALS2Q96Q42 1657 aa27.19■■□□□ 1.94
RHBDL3-202ENST00000431505 ATAD2Q6PL18 1390 aa27.18■■□□□ 1.94
RHBDL3-202ENST00000431505 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
RHBDL3-202ENST00000431505 NWD2Q9ULI1 1742 aa27.16■■□□□ 1.94
RHBDL3-202ENST00000431505 PLCH1Q4KWH8 1693 aa27.15■■□□□ 1.94
RHBDL3-202ENST00000431505 FAM83GA6ND36 823 aa27.14■■□□□ 1.94
RHBDL3-202ENST00000431505 CCDC9Q9Y3X0 531 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms