RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PIK3C2GO75747 1445 aa23.93■■□□□ 1.42
AC055876.3-201ENST00000431496 AFF2P51816 1311 aa23.93■■□□□ 1.42
AC055876.3-201ENST00000431496 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
AC055876.3-201ENST00000431496 RAB3GAP2Q9H2M9 1393 aa23.92■■□□□ 1.42
AC055876.3-201ENST00000431496 RXRBP28702 533 aa23.92■■□□□ 1.42
AC055876.3-201ENST00000431496 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
AC055876.3-201ENST00000431496 C14orf93Q9H972 538 aaKnown RBP23.92■■□□□ 1.42
AC055876.3-201ENST00000431496 LAMC1P11047 1609 aa23.92■■□□□ 1.42
AC055876.3-201ENST00000431496 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
AC055876.3-201ENST00000431496 SIRT1Q96EB6 747 aa23.89■■□□□ 1.41
AC055876.3-201ENST00000431496 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
AC055876.3-201ENST00000431496 PLEKHH1Q9ULM0 1364 aa23.88■■□□□ 1.41
AC055876.3-201ENST00000431496 CDC42BPGQ6DT37 1551 aa23.87■■□□□ 1.41
AC055876.3-201ENST00000431496 ADAMTS2O95450 1211 aa23.87■■□□□ 1.41
AC055876.3-201ENST00000431496 NPHP3Q7Z494 1330 aa23.86■■□□□ 1.41
AC055876.3-201ENST00000431496 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
AC055876.3-201ENST00000431496 NUTM2FA1L443 756 aa23.85■■□□□ 1.41
AC055876.3-201ENST00000431496 FOXO3O43524 673 aa23.85■■□□□ 1.41
AC055876.3-201ENST00000431496 NGLY1Q96IV0 654 aa23.85■■□□□ 1.41
AC055876.3-201ENST00000431496 QTRT2Q9H974 415 aaKnown RBP23.85■■□□□ 1.41
AC055876.3-201ENST00000431496 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
AC055876.3-201ENST00000431496 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
AC055876.3-201ENST00000431496 HRCP23327 699 aa23.82■■□□□ 1.4
AC055876.3-201ENST00000431496 MYOM2P54296 1465 aa23.81■■□□□ 1.4
AC055876.3-201ENST00000431496 XPCQ01831 940 aaPredicted RBP23.81■■□□□ 1.4
AC055876.3-201ENST00000431496 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
AC055876.3-201ENST00000431496 CDK12Q9NYV4 1490 aaPredicted RBP23.81■■□□□ 1.4
AC055876.3-201ENST00000431496 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
AC055876.3-201ENST00000431496 UPF1Q92900 1129 aaKnown RBP eCLIP23.79■■□□□ 1.4
AC055876.3-201ENST00000431496 PXDNQ92626 1479 aa23.78■■□□□ 1.4
AC055876.3-201ENST00000431496 FNBP4Q8N3X1 1017 aaPredicted RBP23.77■■□□□ 1.4
AC055876.3-201ENST00000431496 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
AC055876.3-201ENST00000431496 USP21Q9UK80 565 aa23.76■■□□□ 1.39
AC055876.3-201ENST00000431496 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
AC055876.3-201ENST00000431496 SAFB2Q14151 953 aaKnown RBP eCLIP23.73■■□□□ 1.39
AC055876.3-201ENST00000431496 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
AC055876.3-201ENST00000431496 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
AC055876.3-201ENST00000431496 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
AC055876.3-201ENST00000431496 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
AC055876.3-201ENST00000431496 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
AC055876.3-201ENST00000431496 POGKQ9P215 609 aa23.72■■□□□ 1.39
AC055876.3-201ENST00000431496 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
AC055876.3-201ENST00000431496 SPATA31A3Q5VYP0 1347 aa23.71■■□□□ 1.39
AC055876.3-201ENST00000431496 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
AC055876.3-201ENST00000431496 RGS12O14924 1447 aa23.69■■□□□ 1.38
AC055876.3-201ENST00000431496 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
AC055876.3-201ENST00000431496 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
AC055876.3-201ENST00000431496 PSME1Q06323 249 aa23.67■■□□□ 1.38
AC055876.3-201ENST00000431496 ADGRB1O14514 1584 aa23.66■■□□□ 1.38
AC055876.3-201ENST00000431496 KIF1AQ12756 1690 aa23.66■■□□□ 1.38
AC055876.3-201ENST00000431496 BCL9LQ86UU0 1499 aa23.64■■□□□ 1.38
AC055876.3-201ENST00000431496 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.37
AC055876.3-201ENST00000431496 ATRNO75882 1429 aa23.64■■□□□ 1.37
AC055876.3-201ENST00000431496 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
AC055876.3-201ENST00000431496 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
AC055876.3-201ENST00000431496 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
AC055876.3-201ENST00000431496 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
AC055876.3-201ENST00000431496 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
AC055876.3-201ENST00000431496 TNS3Q68CZ2 1445 aa23.59■■□□□ 1.37
AC055876.3-201ENST00000431496 CABLES1Q8TDN4 633 aa23.58■■□□□ 1.37
AC055876.3-201ENST00000431496 GJD4Q96KN9 370 aaPredicted RBP23.58■■□□□ 1.37
AC055876.3-201ENST00000431496 MARF1Q9Y4F3 1742 aaKnown RBP23.58■■□□□ 1.37
AC055876.3-201ENST00000431496 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
AC055876.3-201ENST00000431496 LMOD2Q6P5Q4 547 aa23.57■■□□□ 1.36
AC055876.3-201ENST00000431496 UNC5CLQ8IV45 518 aa23.57■■□□□ 1.36
AC055876.3-201ENST00000431496 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
AC055876.3-201ENST00000431496 HAP1P54257 671 aaPredicted RBP23.56■■□□□ 1.36
AC055876.3-201ENST00000431496 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
AC055876.3-201ENST00000431496 USP32Q8NFA0 1604 aa23.55■■□□□ 1.36
AC055876.3-201ENST00000431496 SLIT2O94813 1529 aa23.54■■□□□ 1.36
AC055876.3-201ENST00000431496 ARHGEF10O15013 1369 aa23.54■■□□□ 1.36
AC055876.3-201ENST00000431496 EIF3AQ14152 1382 aaKnown RBP23.54■■□□□ 1.36
AC055876.3-201ENST00000431496 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
AC055876.3-201ENST00000431496 PLEKHG5O94827 1062 aa23.53■■□□□ 1.36
AC055876.3-201ENST00000431496 GPRASP1Q5JY77 1395 aa23.51■■□□□ 1.35
AC055876.3-201ENST00000431496 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
AC055876.3-201ENST00000431496 NGDNQ8NEJ9 315 aaKnown RBP23.48■■□□□ 1.35
AC055876.3-201ENST00000431496 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
AC055876.3-201ENST00000431496 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
AC055876.3-201ENST00000431496 VPS72Q15906 364 aa23.47■■□□□ 1.35
AC055876.3-201ENST00000431496 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
AC055876.3-201ENST00000431496 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
AC055876.3-201ENST00000431496 NBPF1Q3BBV0 1214 aa23.45■■□□□ 1.34
AC055876.3-201ENST00000431496 CDK19Q9BWU1 502 aa23.45■■□□□ 1.34
AC055876.3-201ENST00000431496 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
AC055876.3-201ENST00000431496 CCDC125Q86Z20 511 aa23.43■■□□□ 1.34
AC055876.3-201ENST00000431496 GLI3P10071 1580 aa23.43■■□□□ 1.34
AC055876.3-201ENST00000431496 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
AC055876.3-201ENST00000431496 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
AC055876.3-201ENST00000431496 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
AC055876.3-201ENST00000431496 EP400Q96L91 3159 aa23.41■■□□□ 1.34
AC055876.3-201ENST00000431496 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
AC055876.3-201ENST00000431496 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
AC055876.3-201ENST00000431496 ABCA3Q99758 1704 aa23.39■■□□□ 1.34
AC055876.3-201ENST00000431496 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.34
AC055876.3-201ENST00000431496 ATP7BP35670 1465 aa23.39■■□□□ 1.34
AC055876.3-201ENST00000431496 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.33
AC055876.3-201ENST00000431496 ALS2Q96Q42 1657 aa23.38■■□□□ 1.33
AC055876.3-201ENST00000431496 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
AC055876.3-201ENST00000431496 NWD2Q9ULI1 1742 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms