RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 IGHA1P01876 353 aa6.04□□□□□ -1.44
CDC40-204ENST00000431461 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
CDC40-204ENST00000431461 REPIN1Q9BWE0 567 aaKnown RBP6.04□□□□□ -1.44
CDC40-204ENST00000431461 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
CDC40-204ENST00000431461 MLLT3P42568 568 aaPredicted RBP6.03□□□□□ -1.44
CDC40-204ENST00000431461 AMER1Q5JTC6 1135 aaPredicted RBP6.03□□□□□ -1.44
CDC40-204ENST00000431461 MORN1Q5T089 497 aa6.03□□□□□ -1.44
CDC40-204ENST00000431461 PSMG3-AS1Q96PY0 264 aa6.03□□□□□ -1.44
CDC40-204ENST00000431461 H3BM21 787 aa6.02□□□□□ -1.45
CDC40-204ENST00000431461 ATP6V1AP38606 617 aa6.02□□□□□ -1.45
CDC40-204ENST00000431461 RASSF7Q02833 373 aa6.02□□□□□ -1.45
CDC40-204ENST00000431461 MSS51Q4VC12 460 aa6.02□□□□□ -1.45
CDC40-204ENST00000431461 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
CDC40-204ENST00000431461 KRTAP1-3Q8IUG1 177 aa6.01□□□□□ -1.45
CDC40-204ENST00000431461 FAM160A2Q8N612 972 aaPredicted RBP6.01□□□□□ -1.45
CDC40-204ENST00000431461 PXYLP1Q8TE99 480 aa6□□□□□ -1.45
CDC40-204ENST00000431461 ARHGEF1Q92888 912 aaKnown RBP6□□□□□ -1.45
CDC40-204ENST00000431461 TRIM32Q13049 653 aa5.99□□□□□ -1.45
CDC40-204ENST00000431461 BRICD5Q6PL45 260 aa5.99□□□□□ -1.45
CDC40-204ENST00000431461 MRGPRX2Q96LB1 330 aa5.99□□□□□ -1.45
CDC40-204ENST00000431461 NUTM2FA1L443 756 aa5.98□□□□□ -1.45
CDC40-204ENST00000431461 J3QL48 77 aa5.98□□□□□ -1.45
CDC40-204ENST00000431461 FCHSD2O94868 740 aa5.98□□□□□ -1.45
CDC40-204ENST00000431461 ERBB4Q15303 1308 aa5.98□□□□□ -1.45
CDC40-204ENST00000431461 GRIPAP1Q4V328 841 aa5.97□□□□□ -1.45
CDC40-204ENST00000431461 HPS1Q92902 700 aa5.97□□□□□ -1.45
CDC40-204ENST00000431461 DAXXQ9UER7 740 aaPredicted RBP5.97□□□□□ -1.45
CDC40-204ENST00000431461 SLC27A5Q9Y2P5 690 aa5.97□□□□□ -1.45
CDC40-204ENST00000431461 MMP16P51512 607 aa5.96□□□□□ -1.46
CDC40-204ENST00000431461 WNT7BP56706 349 aa5.96□□□□□ -1.46
CDC40-204ENST00000431461 FOXK2Q01167 660 aa5.96□□□□□ -1.46
CDC40-204ENST00000431461 GPAT2Q6NUI2 795 aa5.96□□□□□ -1.46
CDC40-204ENST00000431461 RTN4Q9NQC3 1192 aaKnown RBP5.96□□□□□ -1.46
CDC40-204ENST00000431461 DNMT3AQ9Y6K1 912 aaPredicted RBP5.96□□□□□ -1.46
CDC40-204ENST00000431461 FUT2Q10981 343 aa5.95□□□□□ -1.46
CDC40-204ENST00000431461 METTL3Q86U44 580 aaKnown RBP5.95□□□□□ -1.46
CDC40-204ENST00000431461 PRDM9Q9NQV7 894 aa5.95□□□□□ -1.46
CDC40-204ENST00000431461 GCGRP47871 477 aa5.94□□□□□ -1.46
CDC40-204ENST00000431461 VEGFBP49765 207 aa5.94□□□□□ -1.46
CDC40-204ENST00000431461 Q3C1V9 767 aa5.94□□□□□ -1.46
CDC40-204ENST00000431461 SULF1Q8IWU6 871 aa5.94□□□□□ -1.46
CDC40-204ENST00000431461 RDH13Q8NBN7 331 aa5.94□□□□□ -1.46
CDC40-204ENST00000431461 FECHP22830 423 aa5.92□□□□□ -1.46
CDC40-204ENST00000431461 HIC1Q14526 733 aa5.92□□□□□ -1.46
CDC40-204ENST00000431461 RC3H1Q5TC82 1133 aaKnown RBP5.92□□□□□ -1.46
CDC40-204ENST00000431461 KCNV2Q8TDN2 545 aa5.92□□□□□ -1.46
CDC40-204ENST00000431461 NLRP7Q8WX94 980 aa5.92□□□□□ -1.46
CDC40-204ENST00000431461 TSHZ2Q9NRE2 1034 aa5.92□□□□□ -1.46
CDC40-204ENST00000431461 VSIG8P0DPA2 414 aa5.91□□□□□ -1.46
CDC40-204ENST00000431461 DXOO77932 396 aaKnown RBP5.9□□□□□ -1.46
CDC40-204ENST00000431461 CAPN5O15484 640 aaPredicted RBP5.89□□□□□ -1.47
CDC40-204ENST00000431461 ADAM23O75077 832 aa5.89□□□□□ -1.47
CDC40-204ENST00000431461 TRIM46Q7Z4K8 759 aa5.89□□□□□ -1.47
CDC40-204ENST00000431461 DDX11L8A8MPP1 907 aa5.88□□□□□ -1.47
CDC40-204ENST00000431461 ALDH1A1P00352 501 aa5.88□□□□□ -1.47
CDC40-204ENST00000431461 RNF19BQ6ZMZ0 732 aa5.88□□□□□ -1.47
CDC40-204ENST00000431461 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
CDC40-204ENST00000431461 USB1Q9BQ65 265 aaKnown RBP5.87□□□□□ -1.47
CDC40-204ENST00000431461 SIAH2O43255 324 aa5.86□□□□□ -1.47
CDC40-204ENST00000431461 SKOR1P84550 965 aa5.86□□□□□ -1.47
CDC40-204ENST00000431461 P3H3Q8IVL6 736 aa5.86□□□□□ -1.47
CDC40-204ENST00000431461 WASF2Q9Y6W5 498 aa5.86□□□□□ -1.47
CDC40-204ENST00000431461 SEMA3EO15041 775 aa5.85□□□□□ -1.47
CDC40-204ENST00000431461 ADAMTS8Q9UP79 889 aa5.85□□□□□ -1.47
CDC40-204ENST00000431461 BTBD11A6QL63 1104 aa5.84□□□□□ -1.47
CDC40-204ENST00000431461 KANK3Q6NY19 840 aa5.84□□□□□ -1.47
CDC40-204ENST00000431461 ZFP42Q96MM3 310 aa5.84□□□□□ -1.47
CDC40-204ENST00000431461 GNPATO15228 680 aa5.83□□□□□ -1.48
CDC40-204ENST00000431461 BMP1P13497 986 aa5.83□□□□□ -1.48
CDC40-204ENST00000431461 MPNDQ8N594 471 aa5.83□□□□□ -1.48
CDC40-204ENST00000431461 SCARF1Q14162 830 aa5.82□□□□□ -1.48
CDC40-204ENST00000431461 CCDC24Q8N4L8 307 aa5.82□□□□□ -1.48
CDC40-204ENST00000431461 EHBP1Q8NDI1 1231 aa5.82□□□□□ -1.48
CDC40-204ENST00000431461 USP46P62068 366 aa5.81□□□□□ -1.48
CDC40-204ENST00000431461 RBM26Q5T8P6 1007 aaKnown RBP5.81□□□□□ -1.48
CDC40-204ENST00000431461 Q8N3U1 123 aa5.81□□□□□ -1.48
CDC40-204ENST00000431461 PLEKHG3A1L390 1219 aa5.8□□□□□ -1.48
CDC40-204ENST00000431461 SMYD5Q6GMV2 418 aa5.8□□□□□ -1.48
CDC40-204ENST00000431461 TESPA1A2RU30 521 aaPredicted RBP5.79□□□□□ -1.48
CDC40-204ENST00000431461 IRS1P35568 1242 aa5.79□□□□□ -1.48
CDC40-204ENST00000431461 MRPL14Q6P1L8 145 aaKnown RBP5.79□□□□□ -1.48
CDC40-204ENST00000431461 MSTNO14793 375 aa5.78□□□□□ -1.48
CDC40-204ENST00000431461 KDM4AO75164 1064 aa5.78□□□□□ -1.48
CDC40-204ENST00000431461 JUNDP17535 347 aa5.78□□□□□ -1.48
CDC40-204ENST00000431461 PHOX2BQ99453 314 aa5.78□□□□□ -1.48
CDC40-204ENST00000431461 CD46P15529 392 aa5.77□□□□□ -1.49
CDC40-204ENST00000431461 HLA-CQ95604 372 aa5.77□□□□□ -1.49
CDC40-204ENST00000431461 GPR37O15354 613 aa5.76□□□□□ -1.49
CDC40-204ENST00000431461 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
CDC40-204ENST00000431461 VARSP26640 1264 aaKnown RBP5.75□□□□□ -1.49
CDC40-204ENST00000431461 SH3BP2P78314 561 aa5.75□□□□□ -1.49
CDC40-204ENST00000431461 NUDT12Q9BQG2 462 aa5.75□□□□□ -1.49
CDC40-204ENST00000431461 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
CDC40-204ENST00000431461 PPFIA3O75145 1194 aa5.74□□□□□ -1.49
CDC40-204ENST00000431461 ADH1CP00326 375 aa5.74□□□□□ -1.49
CDC40-204ENST00000431461 SCARF2Q96GP6 870 aaPredicted RBP5.74□□□□□ -1.49
CDC40-204ENST00000431461 NNTQ13423 1086 aa5.73□□□□□ -1.49
CDC40-204ENST00000431461 PTCRAQ6ISU1 281 aaPredicted RBP5.73□□□□□ -1.49
CDC40-204ENST00000431461 SVOPQ8N4V2 548 aa5.73□□□□□ -1.49
CDC40-204ENST00000431461 PURBQ96QR8 312 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms