RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 ABCC3O15438 1527 aa24.09■■□□□ 1.45
CHD1L-204ENST00000431239 WWC1Q8IX03 1113 aa24.09■■□□□ 1.45
CHD1L-204ENST00000431239 POLR3AO14802 1390 aaPredicted RBP24.08■■□□□ 1.45
CHD1L-204ENST00000431239 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
CHD1L-204ENST00000431239 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
CHD1L-204ENST00000431239 STK26Q9P289 416 aa24.07■■□□□ 1.44
CHD1L-204ENST00000431239 MTHFSP49914 203 aa24.07■■□□□ 1.44
CHD1L-204ENST00000431239 CABP2Q9NPB3 220 aa24.06■■□□□ 1.44
CHD1L-204ENST00000431239 SIGLEC1Q9BZZ2 1709 aa24.05■■□□□ 1.44
CHD1L-204ENST00000431239 CFAP74Q9C0B2 1584 aa24.04■■□□□ 1.44
CHD1L-204ENST00000431239 FRAT1Q92837 279 aaPredicted RBP24.04■■□□□ 1.44
CHD1L-204ENST00000431239 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
CHD1L-204ENST00000431239 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
CHD1L-204ENST00000431239 PANK1Q8TE04 598 aa24.04■■□□□ 1.44
CHD1L-204ENST00000431239 CGNL1Q0VF96 1302 aa24.03■■□□□ 1.44
CHD1L-204ENST00000431239 CAMSAP1Q5T5Y3 1602 aa24.02■■□□□ 1.44
CHD1L-204ENST00000431239 GLI2P10070 1586 aa24.02■■□□□ 1.44
CHD1L-204ENST00000431239 COG6Q9Y2V7 657 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 RPGRIP1LQ68CZ1 1315 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 IDI1Q13907 227 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 SHPRHQ149N8 1683 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 EVC2Q86UK5 1308 aa24.01■■□□□ 1.43
CHD1L-204ENST00000431239 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
CHD1L-204ENST00000431239 RUNDC1Q96C34 613 aa24■■□□□ 1.43
CHD1L-204ENST00000431239 SLC4A3P48751 1232 aa24■■□□□ 1.43
CHD1L-204ENST00000431239 IGHDP01880 384 aa23.97■■□□□ 1.43
CHD1L-204ENST00000431239 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
CHD1L-204ENST00000431239 U2AF1L5P0DN76 240 aaPredicted RBP23.97■■□□□ 1.43
CHD1L-204ENST00000431239 SRPK2P78362 688 aaKnown RBP23.97■■□□□ 1.43
CHD1L-204ENST00000431239 U2AF1Q01081 240 aaKnown RBP eCLIP23.97■■□□□ 1.432e-6■■□□□ 13.9
CHD1L-204ENST00000431239 C8orf34Q49A92 452 aa23.97■■□□□ 1.43
CHD1L-204ENST00000431239 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
CHD1L-204ENST00000431239 FAM161AQ3B820 660 aa23.96■■□□□ 1.43
CHD1L-204ENST00000431239 NEXMIFQ5QGS0 1516 aa23.95■■□□□ 1.42
CHD1L-204ENST00000431239 NGEFQ8N5V2 710 aa23.95■■□□□ 1.42
CHD1L-204ENST00000431239 TNNQ9UQP3 1299 aa23.95■■□□□ 1.42
CHD1L-204ENST00000431239 NEFMP07197 916 aa23.94■■□□□ 1.42
CHD1L-204ENST00000431239 YEATS2Q9ULM3 1422 aa23.94■■□□□ 1.42
CHD1L-204ENST00000431239 DIP2CQ9Y2E4 1556 aa23.94■■□□□ 1.42
CHD1L-204ENST00000431239 ARHGEF28Q8N1W1 1705 aaKnown RBP23.94■■□□□ 1.42
CHD1L-204ENST00000431239 MINK1Q8N4C8 1332 aaPredicted RBP23.93■■□□□ 1.42
CHD1L-204ENST00000431239 GGNBP2Q9H3C7 697 aa23.93■■□□□ 1.42
CHD1L-204ENST00000431239 ANKRD36BQ8N2N9 1353 aa23.92■■□□□ 1.42
CHD1L-204ENST00000431239 CLUAP1Q96AJ1 413 aa23.92■■□□□ 1.42
CHD1L-204ENST00000431239 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
CHD1L-204ENST00000431239 DDRGK1Q96HY6 314 aa23.9■■□□□ 1.42
CHD1L-204ENST00000431239 IQSEC2Q5JU85 1478 aa23.9■■□□□ 1.42
CHD1L-204ENST00000431239 PDE3AQ14432 1141 aa23.9■■□□□ 1.42
CHD1L-204ENST00000431239 PIK3C2BO00750 1634 aa23.9■■□□□ 1.42
CHD1L-204ENST00000431239 NEO1Q92859 1461 aa23.9■■□□□ 1.42
CHD1L-204ENST00000431239 U2SURPO15042 1029 aaKnown RBP23.9■■□□□ 1.42
CHD1L-204ENST00000431239 A0A1W2PP64 1363 aa23.89■■□□□ 1.41
CHD1L-204ENST00000431239 RLBP1P12271 317 aa23.88■■□□□ 1.41
CHD1L-204ENST00000431239 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
CHD1L-204ENST00000431239 MYO5BQ9ULV0 1848 aa23.88■■□□□ 1.41
CHD1L-204ENST00000431239 PRAM1Q96QH2 718 aa23.87■■□□□ 1.41
CHD1L-204ENST00000431239 POGKQ9P215 609 aa23.86■■□□□ 1.41
CHD1L-204ENST00000431239 DAXXQ9UER7 740 aaPredicted RBP23.86■■□□□ 1.41
CHD1L-204ENST00000431239 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
CHD1L-204ENST00000431239 TSR2Q969E8 191 aaKnown RBP23.85■■□□□ 1.41
CHD1L-204ENST00000431239 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
CHD1L-204ENST00000431239 WDR63Q8IWG1 891 aa23.84■■□□□ 1.41
CHD1L-204ENST00000431239 SLC52A1Q9NWF4 448 aa23.83■■□□□ 1.41
CHD1L-204ENST00000431239 RICTORQ6R327 1708 aa23.82■■□□□ 1.4
CHD1L-204ENST00000431239 STAG3Q9UJ98 1225 aa23.82■■□□□ 1.4
CHD1L-204ENST00000431239 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
CHD1L-204ENST00000431239 NSD2O96028 1365 aa23.8■■□□□ 1.4
CHD1L-204ENST00000431239 PCDHB15Q9Y5E8 787 aa23.8■■□□□ 1.4
CHD1L-204ENST00000431239 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
CHD1L-204ENST00000431239 ARHGAP31Q2M1Z3 1444 aa23.8■■□□□ 1.4
CHD1L-204ENST00000431239 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
CHD1L-204ENST00000431239 PPM1GO15355 546 aaPredicted RBP23.79■■□□□ 1.4
CHD1L-204ENST00000431239 ABCC11Q96J66 1382 aa23.79■■□□□ 1.4
CHD1L-204ENST00000431239 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
CHD1L-204ENST00000431239 CCDC27Q2M243 656 aa23.77■■□□□ 1.4
CHD1L-204ENST00000431239 FYB1O15117 783 aa23.77■■□□□ 1.4
CHD1L-204ENST00000431239 PTPRMP28827 1452 aa23.76■■□□□ 1.39
CHD1L-204ENST00000431239 PREX1Q8TCU6 1659 aa23.76■■□□□ 1.39
CHD1L-204ENST00000431239 FBLN1P23142 703 aa23.76■■□□□ 1.39
CHD1L-204ENST00000431239 TERF2IPQ9NYB0 399 aa23.76■■□□□ 1.39
CHD1L-204ENST00000431239 SEC24BO95487 1268 aa23.75■■□□□ 1.39
CHD1L-204ENST00000431239 YTHDC2Q9H6S0 1430 aaKnown RBP23.75■■□□□ 1.39
CHD1L-204ENST00000431239 MAPK8IP3Q9UPT6 1336 aa23.75■■□□□ 1.39
CHD1L-204ENST00000431239 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
CHD1L-204ENST00000431239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.74■■□□□ 1.392e-7■■■■□ 20.7
CHD1L-204ENST00000431239 CABP1Q9NZU7 370 aa23.74■■□□□ 1.39
CHD1L-204ENST00000431239 TMPOP42166 694 aaKnown RBP23.73■■□□□ 1.39
CHD1L-204ENST00000431239 EXOSC9Q06265 439 aaKnown RBP23.73■■□□□ 1.39
CHD1L-204ENST00000431239 FTSJ3Q8IY81 847 aaKnown RBP23.73■■□□□ 1.39
CHD1L-204ENST00000431239 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
CHD1L-204ENST00000431239 ATAD2Q6PL18 1390 aa23.72■■□□□ 1.39
CHD1L-204ENST00000431239 MLECQ14165 292 aa23.72■■□□□ 1.39
CHD1L-204ENST00000431239 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
CHD1L-204ENST00000431239 ZFYVE9O95405 1425 aa23.72■■□□□ 1.39
CHD1L-204ENST00000431239 PLEKHF1Q96S99 279 aa23.72■■□□□ 1.39
CHD1L-204ENST00000431239 WAPLQ7Z5K2 1190 aa23.7■■□□□ 1.39
CHD1L-204ENST00000431239 PMFBP1Q8TBY8 1022 aa23.7■■□□□ 1.39
CHD1L-204ENST00000431239 TRIM35Q9UPQ4 493 aa23.7■■□□□ 1.39
CHD1L-204ENST00000431239 CD163L1Q9NR16 1453 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms