RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
ECHDC1-207ENST00000430841 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
ECHDC1-207ENST00000430841 ANKRD30AQ9BXX3 1397 aa12.23□□□□□ -0.45
ECHDC1-207ENST00000430841 ZNF772Q68DY9 489 aaPredicted RBP12.23□□□□□ -0.45
ECHDC1-207ENST00000430841 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
ECHDC1-207ENST00000430841 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
ECHDC1-207ENST00000430841 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
ECHDC1-207ENST00000430841 SLAIN2Q9P270 581 aa12.22□□□□□ -0.45
ECHDC1-207ENST00000430841 SEC24BO95487 1268 aa12.21□□□□□ -0.45
ECHDC1-207ENST00000430841 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
ECHDC1-207ENST00000430841 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
ECHDC1-207ENST00000430841 ATF3P18847 181 aa12.2□□□□□ -0.46
ECHDC1-207ENST00000430841 IDI1Q13907 227 aa12.2□□□□□ -0.46
ECHDC1-207ENST00000430841 SLC52A1Q9NWF4 448 aa12.2□□□□□ -0.46
ECHDC1-207ENST00000430841 DAPK1P53355 1430 aa12.2□□□□□ -0.46
ECHDC1-207ENST00000430841 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
ECHDC1-207ENST00000430841 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
ECHDC1-207ENST00000430841 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 FKBP8Q14318 412 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 CHIC2Q9UKJ5 165 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 ABCC5O15440 1437 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
ECHDC1-207ENST00000430841 TET3O43151 1660 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 GCC2Q8IWJ2 1684 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 IER5LQ5T953 404 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 COL16A1Q07092 1604 aaPredicted RBP12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
ECHDC1-207ENST00000430841 RPRD2Q5VT52 1461 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-207ENST00000430841 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-207ENST00000430841 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
ECHDC1-207ENST00000430841 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 RXRBP28702 533 aa12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
ECHDC1-207ENST00000430841 DIP2AQ14689 1571 aa12.14□□□□□ -0.47
ECHDC1-207ENST00000430841 NOS1P29475 1434 aa12.14□□□□□ -0.47
ECHDC1-207ENST00000430841 NCOA3Q9Y6Q9 1424 aa12.14□□□□□ -0.47
ECHDC1-207ENST00000430841 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
ECHDC1-207ENST00000430841 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
ECHDC1-207ENST00000430841 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
ECHDC1-207ENST00000430841 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■□□□□ 8
ECHDC1-207ENST00000430841 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
ECHDC1-207ENST00000430841 TRPM2O94759 1503 aa12.11□□□□□ -0.47
ECHDC1-207ENST00000430841 LRP6O75581 1613 aa12.11□□□□□ -0.47
ECHDC1-207ENST00000430841 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
ECHDC1-207ENST00000430841 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
ECHDC1-207ENST00000430841 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-207ENST00000430841 NUBP1P53384 320 aa12.1□□□□□ -0.47
ECHDC1-207ENST00000430841 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
ECHDC1-207ENST00000430841 MIER1Q8N108 512 aa12.1□□□□□ -0.47
ECHDC1-207ENST00000430841 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
ECHDC1-207ENST00000430841 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
ECHDC1-207ENST00000430841 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-207ENST00000430841 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
ECHDC1-207ENST00000430841 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
ECHDC1-207ENST00000430841 ANKRD50Q9ULJ7 1429 aa12.09□□□□□ -0.47
ECHDC1-207ENST00000430841 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.47
ECHDC1-207ENST00000430841 TMEM131LA2VDJ0 1609 aa12.08□□□□□ -0.48
ECHDC1-207ENST00000430841 AFF2P51816 1311 aa12.08□□□□□ -0.48
ECHDC1-207ENST00000430841 DCCP43146 1447 aa12.07□□□□□ -0.48
ECHDC1-207ENST00000430841 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
ECHDC1-207ENST00000430841 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
ECHDC1-207ENST00000430841 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
ECHDC1-207ENST00000430841 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-207ENST00000430841 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
ECHDC1-207ENST00000430841 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
ECHDC1-207ENST00000430841 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
ECHDC1-207ENST00000430841 BRINP3Q76B58 766 aa12.04□□□□□ -0.48
ECHDC1-207ENST00000430841 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
ECHDC1-207ENST00000430841 UNC13BO14795 1591 aa12.04□□□□□ -0.48
ECHDC1-207ENST00000430841 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
ECHDC1-207ENST00000430841 MARVELD3Q96A59 401 aa12.03□□□□□ -0.48
ECHDC1-207ENST00000430841 ATAD2Q6PL18 1390 aa12.03□□□□□ -0.48
ECHDC1-207ENST00000430841 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
ECHDC1-207ENST00000430841 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
ECHDC1-207ENST00000430841 NHSL1Q5SYE7 1610 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 E9PCH4 1651 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 RGS12O14924 1447 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
ECHDC1-207ENST00000430841 ADAMTS2O95450 1211 aa12□□□□□ -0.49
ECHDC1-207ENST00000430841 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
ECHDC1-207ENST00000430841 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
ECHDC1-207ENST00000430841 MST1RQ04912 1400 aa11.98□□□□□ -0.49
ECHDC1-207ENST00000430841 PLCG2P16885 1265 aa11.98□□□□□ -0.49
ECHDC1-207ENST00000430841 ADGRL3Q9HAR2 1447 aa11.97□□□□□ -0.49
ECHDC1-207ENST00000430841 NUP155O75694 1391 aa11.97□□□□□ -0.49
ECHDC1-207ENST00000430841 PNPLA6Q8IY17 1366 aa11.97□□□□□ -0.49
ECHDC1-207ENST00000430841 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.49
ECHDC1-207ENST00000430841 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
ECHDC1-207ENST00000430841 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
ECHDC1-207ENST00000430841 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms