RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
CHD4-202ENST00000430771 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
CHD4-202ENST00000430771 IQSEC2Q5JU85 1478 aa15.49■□□□□ 0.07
CHD4-202ENST00000430771 DCCP43146 1447 aa15.49■□□□□ 0.07
CHD4-202ENST00000430771 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
CHD4-202ENST00000430771 FMN2Q9NZ56 1722 aa15.47■□□□□ 0.07
CHD4-202ENST00000430771 MSH6P52701 1360 aa15.47■□□□□ 0.07
CHD4-202ENST00000430771 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
CHD4-202ENST00000430771 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHD4-202ENST00000430771 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.07
CHD4-202ENST00000430771 TULP4Q9NRJ4 1543 aa15.46■□□□□ 0.07
CHD4-202ENST00000430771 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
CHD4-202ENST00000430771 ITSN1Q15811 1721 aa15.44■□□□□ 0.06
CHD4-202ENST00000430771 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
CHD4-202ENST00000430771 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
CHD4-202ENST00000430771 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
CHD4-202ENST00000430771 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
CHD4-202ENST00000430771 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
CHD4-202ENST00000430771 TOPAZ1Q8N9V7 1692 aa15.41■□□□□ 0.06
CHD4-202ENST00000430771 TMF1P82094 1093 aa15.4■□□□□ 0.06
CHD4-202ENST00000430771 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
CHD4-202ENST00000430771 TESK2Q96S53 571 aa15.4■□□□□ 0.06
CHD4-202ENST00000430771 HIRIP3Q9BW71 556 aaPredicted RBP15.4■□□□□ 0.06
CHD4-202ENST00000430771 ATP7BP35670 1465 aa15.39■□□□□ 0.05
CHD4-202ENST00000430771 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
CHD4-202ENST00000430771 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
CHD4-202ENST00000430771 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
CHD4-202ENST00000430771 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
CHD4-202ENST00000430771 ATF3P18847 181 aa15.38■□□□□ 0.05
CHD4-202ENST00000430771 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
CHD4-202ENST00000430771 CADPS2Q86UW7 1296 aa15.38■□□□□ 0.05
CHD4-202ENST00000430771 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
CHD4-202ENST00000430771 MST1RQ04912 1400 aa15.37■□□□□ 0.05
CHD4-202ENST00000430771 SRPK2P78362 688 aaKnown RBP15.36■□□□□ 0.05
CHD4-202ENST00000430771 CERKQ8TCT0 537 aa15.36■□□□□ 0.05
CHD4-202ENST00000430771 MYOM1P52179 1685 aa15.35■□□□□ 0.05
CHD4-202ENST00000430771 RGPD8O14715 1765 aaPredicted RBP15.34■□□□□ 0.05
CHD4-202ENST00000430771 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
CHD4-202ENST00000430771 NINLQ9Y2I6 1382 aa15.34■□□□□ 0.05
CHD4-202ENST00000430771 C1orf167Q5SNV9 1468 aa15.33■□□□□ 0.05
CHD4-202ENST00000430771 PUS7Q96PZ0 661 aaKnown RBP15.33■□□□□ 0.04
CHD4-202ENST00000430771 CABP2Q9NPB3 220 aa15.31■□□□□ 0.04
CHD4-202ENST00000430771 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
CHD4-202ENST00000430771 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
CHD4-202ENST00000430771 TOM1O60784 492 aa15.3■□□□□ 0.04
CHD4-202ENST00000430771 PRR36Q9H6K5 1346 aa15.3■□□□□ 0.04
CHD4-202ENST00000430771 AKAP12Q02952 1782 aa15.29■□□□□ 0.04
CHD4-202ENST00000430771 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
CHD4-202ENST00000430771 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
CHD4-202ENST00000430771 NUTM2FA1L443 756 aa15.29■□□□□ 0.04
CHD4-202ENST00000430771 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
CHD4-202ENST00000430771 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
CHD4-202ENST00000430771 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
CHD4-202ENST00000430771 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
CHD4-202ENST00000430771 UBAP1LF5GYI3 381 aa15.27■□□□□ 0.04
CHD4-202ENST00000430771 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
CHD4-202ENST00000430771 SLAIN2Q9P270 581 aa15.26■□□□□ 0.03
CHD4-202ENST00000430771 AHDC1Q5TGY3 1603 aaPredicted RBP15.25■□□□□ 0.03
CHD4-202ENST00000430771 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
CHD4-202ENST00000430771 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
CHD4-202ENST00000430771 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
CHD4-202ENST00000430771 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
CHD4-202ENST00000430771 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
CHD4-202ENST00000430771 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
CHD4-202ENST00000430771 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
CHD4-202ENST00000430771 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
CHD4-202ENST00000430771 C11orf95C9JLR9 678 aaPredicted RBP15.23■□□□□ 0.03
CHD4-202ENST00000430771 BRINP3Q76B58 766 aa15.23■□□□□ 0.03
CHD4-202ENST00000430771 PLEKHG3A1L390 1219 aa15.22■□□□□ 0.03
CHD4-202ENST00000430771 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
CHD4-202ENST00000430771 A0A1W2PP64 1363 aa15.22■□□□□ 0.03
CHD4-202ENST00000430771 CD163L1Q9NR16 1453 aa15.21■□□□□ 0.03
CHD4-202ENST00000430771 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.03
CHD4-202ENST00000430771 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
CHD4-202ENST00000430771 PHLPP1O60346 1717 aa15.21■□□□□ 0.03
CHD4-202ENST00000430771 CPSF1Q10570 1443 aaKnown RBP15.21■□□□□ 0.03
CHD4-202ENST00000430771 HDGFL2Q7Z4V5 671 aaPredicted RBP15.21■□□□□ 0.03
CHD4-202ENST00000430771 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
CHD4-202ENST00000430771 ORAI2Q96SN7 254 aa15.21■□□□□ 0.03
CHD4-202ENST00000430771 CABP1Q9NZU7 370 aa15.21■□□□□ 0.03
CHD4-202ENST00000430771 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.02
CHD4-202ENST00000430771 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
CHD4-202ENST00000430771 USP6P35125 1406 aa15.2■□□□□ 0.02
CHD4-202ENST00000430771 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
CHD4-202ENST00000430771 KIF20BQ96Q89 1820 aa15.2■□□□□ 0.02
CHD4-202ENST00000430771 ACEP12821 1306 aa15.19■□□□□ 0.02
CHD4-202ENST00000430771 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
CHD4-202ENST00000430771 PXDNQ92626 1479 aa15.19■□□□□ 0.02
CHD4-202ENST00000430771 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
CHD4-202ENST00000430771 COL16A1Q07092 1604 aaPredicted RBP15.18■□□□□ 0.02
CHD4-202ENST00000430771 SLC12A5Q9H2X9 1139 aa15.18■□□□□ 0.02
CHD4-202ENST00000430771 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
CHD4-202ENST00000430771 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
CHD4-202ENST00000430771 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
CHD4-202ENST00000430771 TNS3Q68CZ2 1445 aa15.16■□□□□ 0.02
CHD4-202ENST00000430771 NSD3Q9BZ95 1437 aa15.16■□□□□ 0.02
CHD4-202ENST00000430771 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
CHD4-202ENST00000430771 FOXO3O43524 673 aa15.15■□□□□ 0.02
CHD4-202ENST00000430771 PSME1Q06323 249 aa15.15■□□□□ 0.02
CHD4-202ENST00000430771 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms