RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
CDC42EP1-203ENST00000430687 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
CDC42EP1-203ENST00000430687 CENPJQ9HC77 1338 aaPredicted RBP25.63■■□□□ 1.69
CDC42EP1-203ENST00000430687 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
CDC42EP1-203ENST00000430687 ATF3P18847 181 aa25.59■■□□□ 1.69
CDC42EP1-203ENST00000430687 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDC42EP1-203ENST00000430687 TOM1O60784 492 aa25.58■■□□□ 1.69
CDC42EP1-203ENST00000430687 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.57■■□□□ 1.68
CDC42EP1-203ENST00000430687 USP47Q96K76 1375 aa25.56■■□□□ 1.68
CDC42EP1-203ENST00000430687 FBXO41Q8TF61 875 aa25.56■■□□□ 1.68
CDC42EP1-203ENST00000430687 NALCNQ8IZF0 1738 aa25.56■■□□□ 1.68
CDC42EP1-203ENST00000430687 SLC24A1O60721 1099 aa25.55■■□□□ 1.68
CDC42EP1-203ENST00000430687 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
CDC42EP1-203ENST00000430687 ADGRB2O60241 1585 aa25.54■■□□□ 1.68
CDC42EP1-203ENST00000430687 CDC42BPGQ6DT37 1551 aa25.54■■□□□ 1.68
CDC42EP1-203ENST00000430687 MINK1Q8N4C8 1332 aaPredicted RBP25.54■■□□□ 1.68
CDC42EP1-203ENST00000430687 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
CDC42EP1-203ENST00000430687 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.67
CDC42EP1-203ENST00000430687 WASLO00401 505 aaPredicted RBP25.51■■□□□ 1.67
CDC42EP1-203ENST00000430687 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
CDC42EP1-203ENST00000430687 SLAIN2Q9P270 581 aa25.51■■□□□ 1.67
CDC42EP1-203ENST00000430687 HIRIP3Q9BW71 556 aaPredicted RBP25.5■■□□□ 1.67
CDC42EP1-203ENST00000430687 QRICH2Q9H0J4 1663 aa25.48■■□□□ 1.67
CDC42EP1-203ENST00000430687 MST1RQ04912 1400 aa25.47■■□□□ 1.67
CDC42EP1-203ENST00000430687 EVC2Q86UK5 1308 aa25.46■■□□□ 1.67
CDC42EP1-203ENST00000430687 TESK2Q96S53 571 aa25.46■■□□□ 1.67
CDC42EP1-203ENST00000430687 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
CDC42EP1-203ENST00000430687 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
CDC42EP1-203ENST00000430687 ANKARQ7Z5J8 1434 aa25.44■■□□□ 1.66
CDC42EP1-203ENST00000430687 HSPA5P11021 654 aaKnown RBP25.43■■□□□ 1.66
CDC42EP1-203ENST00000430687 FMN2Q9NZ56 1722 aa25.43■■□□□ 1.66
CDC42EP1-203ENST00000430687 PUS7Q96PZ0 661 aaKnown RBP25.41■■□□□ 1.66
CDC42EP1-203ENST00000430687 TULP4Q9NRJ4 1543 aa25.41■■□□□ 1.66
CDC42EP1-203ENST00000430687 PIP4K2BP78356 416 aa25.39■■□□□ 1.66
CDC42EP1-203ENST00000430687 SRPK2P78362 688 aaKnown RBP25.39■■□□□ 1.66
CDC42EP1-203ENST00000430687 TMF1P82094 1093 aa25.39■■□□□ 1.66
CDC42EP1-203ENST00000430687 NUTM2FA1L443 756 aa25.38■■□□□ 1.65
CDC42EP1-203ENST00000430687 NUDT16Q96DE0 195 aaKnown RBP25.37■■□□□ 1.65
CDC42EP1-203ENST00000430687 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
CDC42EP1-203ENST00000430687 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
CDC42EP1-203ENST00000430687 PRR36Q9H6K5 1346 aa25.36■■□□□ 1.65
CDC42EP1-203ENST00000430687 CDCA8Q53HL2 280 aa25.35■■□□□ 1.65
CDC42EP1-203ENST00000430687 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
CDC42EP1-203ENST00000430687 CABP2Q9NPB3 220 aa25.35■■□□□ 1.65
CDC42EP1-203ENST00000430687 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
CDC42EP1-203ENST00000430687 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
CDC42EP1-203ENST00000430687 ATP7BP35670 1465 aa25.34■■□□□ 1.65
CDC42EP1-203ENST00000430687 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
CDC42EP1-203ENST00000430687 USP32Q8NFA0 1604 aa25.32■■□□□ 1.64
CDC42EP1-203ENST00000430687 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
CDC42EP1-203ENST00000430687 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
CDC42EP1-203ENST00000430687 DISP3Q9P2K9 1392 aa25.3■■□□□ 1.64
CDC42EP1-203ENST00000430687 PLEKHG3A1L390 1219 aa25.29■■□□□ 1.64
CDC42EP1-203ENST00000430687 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
CDC42EP1-203ENST00000430687 NPHP3Q7Z494 1330 aa25.26■■□□□ 1.63
CDC42EP1-203ENST00000430687 PPIP5K1Q6PFW1 1433 aa25.25■■□□□ 1.63
CDC42EP1-203ENST00000430687 ITSN1Q15811 1721 aa25.25■■□□□ 1.63
CDC42EP1-203ENST00000430687 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
CDC42EP1-203ENST00000430687 PMFBP1Q8TBY8 1022 aa25.24■■□□□ 1.63
CDC42EP1-203ENST00000430687 CABP1Q9NZU7 370 aa25.24■■□□□ 1.63
CDC42EP1-203ENST00000430687 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
CDC42EP1-203ENST00000430687 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
CDC42EP1-203ENST00000430687 FOXO3O43524 673 aa25.23■■□□□ 1.63
CDC42EP1-203ENST00000430687 RGPD8O14715 1765 aaPredicted RBP25.23■■□□□ 1.63
CDC42EP1-203ENST00000430687 POLR3AO14802 1390 aaPredicted RBP25.22■■□□□ 1.63
CDC42EP1-203ENST00000430687 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
CDC42EP1-203ENST00000430687 ACEP12821 1306 aa25.2■■□□□ 1.62
CDC42EP1-203ENST00000430687 SOS2Q07890 1332 aaPredicted RBP25.2■■□□□ 1.62
CDC42EP1-203ENST00000430687 NHSL1Q5SYE7 1610 aa25.19■■□□□ 1.62
CDC42EP1-203ENST00000430687 PSME1Q06323 249 aa25.19■■□□□ 1.62
CDC42EP1-203ENST00000430687 ZNF692Q9BU19 519 aaPredicted RBP25.19■■□□□ 1.62
CDC42EP1-203ENST00000430687 HSPA1LP34931 641 aa25.18■■□□□ 1.62
CDC42EP1-203ENST00000430687 C11orf95C9JLR9 678 aaPredicted RBP25.17■■□□□ 1.62
CDC42EP1-203ENST00000430687 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
CDC42EP1-203ENST00000430687 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
CDC42EP1-203ENST00000430687 DDX17Q92841 729 aaKnown RBP25.17■■□□□ 1.62
CDC42EP1-203ENST00000430687 SLC12A5Q9H2X9 1139 aa25.16■■□□□ 1.62
CDC42EP1-203ENST00000430687 BRD4O60885 1362 aaPredicted RBP25.16■■□□□ 1.62
CDC42EP1-203ENST00000430687 PXDNQ92626 1479 aa25.15■■□□□ 1.62
CDC42EP1-203ENST00000430687 LRRC59Q96AG4 307 aaKnown RBP25.15■■□□□ 1.62
CDC42EP1-203ENST00000430687 TERF2IPQ9NYB0 399 aa25.15■■□□□ 1.62
CDC42EP1-203ENST00000430687 CPSF1Q10570 1443 aaKnown RBP25.14■■□□□ 1.62
CDC42EP1-203ENST00000430687 PHLPP1O60346 1717 aa25.14■■□□□ 1.61
CDC42EP1-203ENST00000430687 KIF7Q2M1P5 1343 aa25.13■■□□□ 1.61
CDC42EP1-203ENST00000430687 HDGFL2Q7Z4V5 671 aaPredicted RBP25.13■■□□□ 1.61
CDC42EP1-203ENST00000430687 SBNO1A3KN83 1393 aa25.13■■□□□ 1.61
CDC42EP1-203ENST00000430687 COL16A1Q07092 1604 aaPredicted RBP25.12■■□□□ 1.61
CDC42EP1-203ENST00000430687 XPCQ01831 940 aaPredicted RBP25.1■■□□□ 1.61
CDC42EP1-203ENST00000430687 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
CDC42EP1-203ENST00000430687 CD163L1Q9NR16 1453 aa25.09■■□□□ 1.61
CDC42EP1-203ENST00000430687 ANKRD36BQ8N2N9 1353 aa25.09■■□□□ 1.61
CDC42EP1-203ENST00000430687 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
CDC42EP1-203ENST00000430687 USP6P35125 1406 aa25.09■■□□□ 1.61
CDC42EP1-203ENST00000430687 KTN1Q86UP2 1357 aaKnown RBP25.08■■□□□ 1.61
CDC42EP1-203ENST00000430687 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.6
CDC42EP1-203ENST00000430687 WASHC2AQ641Q2 1341 aa25.08■■□□□ 1.6
CDC42EP1-203ENST00000430687 A0A1W2PP64 1363 aa25.06■■□□□ 1.6
CDC42EP1-203ENST00000430687 JCADQ9P266 1359 aa25.05■■□□□ 1.6
CDC42EP1-203ENST00000430687 TNS3Q68CZ2 1445 aa25.05■■□□□ 1.6
CDC42EP1-203ENST00000430687 SSH2Q76I76 1423 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms