RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
CALCOCO1-202ENST00000430117 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
CALCOCO1-202ENST00000430117 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 PANK1Q8TE04 598 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 SSFA2P28290 1259 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 BCL2L12Q9HB09 334 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 KIF3AQ9Y496 699 aa13.61□□□□□ -0.23
CALCOCO1-202ENST00000430117 ERICH4A6NGS2 130 aa13.6□□□□□ -0.23
CALCOCO1-202ENST00000430117 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
CALCOCO1-202ENST00000430117 DNMT1P26358 1616 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-202ENST00000430117 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
CALCOCO1-202ENST00000430117 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
CALCOCO1-202ENST00000430117 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
CALCOCO1-202ENST00000430117 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
CALCOCO1-202ENST00000430117 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
CALCOCO1-202ENST00000430117 RAB3GAP1Q15042 981 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 CLUAP1Q96AJ1 413 aa13.58□□□□□ -0.24
CALCOCO1-202ENST00000430117 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-202ENST00000430117 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
CALCOCO1-202ENST00000430117 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
CALCOCO1-202ENST00000430117 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
CALCOCO1-202ENST00000430117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
CALCOCO1-202ENST00000430117 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
CALCOCO1-202ENST00000430117 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
CALCOCO1-202ENST00000430117 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 APPP05067 770 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 CAPN2P17655 700 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 KCNG1Q9UIX4 513 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 MCM5P33992 734 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 MLECQ14165 292 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
CALCOCO1-202ENST00000430117 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 DDIT3P35638 169 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
CALCOCO1-202ENST00000430117 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-202ENST00000430117 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-202ENST00000430117 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-202ENST00000430117 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 CCDC66A2RUB6 948 aa13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 BAG4O95429 457 aaKnown RBP13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 PTMSP20962 102 aa13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 ZNF445P59923 1031 aa13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.24
CALCOCO1-202ENST00000430117 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
CALCOCO1-202ENST00000430117 SYCE3A1L190 88 aa13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.256e-6■□□□□ 8.3
CALCOCO1-202ENST00000430117 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 CD2BP2O95400 341 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 TNNT3P45378 269 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-202ENST00000430117 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
CALCOCO1-202ENST00000430117 SLFN14P0C7P3 912 aa13.5□□□□□ -0.25
CALCOCO1-202ENST00000430117 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
CALCOCO1-202ENST00000430117 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
CALCOCO1-202ENST00000430117 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 SOX12O15370 315 aa13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
CALCOCO1-202ENST00000430117 PRPF40AO75400 957 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 PRR29P0C7W0 189 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 OGFRQ9NZT2 677 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 ANKRD30AQ9BXX3 1397 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 WWC1Q8IX03 1113 aa13.48□□□□□ -0.25
CALCOCO1-202ENST00000430117 TEX14Q8IWB6 1497 aa13.47□□□□□ -0.25
CALCOCO1-202ENST00000430117 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
CALCOCO1-202ENST00000430117 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
CALCOCO1-202ENST00000430117 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms