RNA–Protein interactions for RNA: ENST00000429958.5

SFTPA1-204, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-204ENST00000429958 LRPPRCP42704 1394 aaKnown RBP17.35■□□□□ 0.37
SFTPA1-204ENST00000429958 SIRT1Q96EB6 747 aa17.34■□□□□ 0.37
SFTPA1-204ENST00000429958 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
SFTPA1-204ENST00000429958 TECPR2O15040 1411 aa17.33■□□□□ 0.36
SFTPA1-204ENST00000429958 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
SFTPA1-204ENST00000429958 PIK3C2GO75747 1445 aa17.31■□□□□ 0.36
SFTPA1-204ENST00000429958 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
SFTPA1-204ENST00000429958 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
SFTPA1-204ENST00000429958 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
SFTPA1-204ENST00000429958 LAMC1P11047 1609 aa17.3■□□□□ 0.36
SFTPA1-204ENST00000429958 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
SFTPA1-204ENST00000429958 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
SFTPA1-204ENST00000429958 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
SFTPA1-204ENST00000429958 FOXO3O43524 673 aa17.28■□□□□ 0.36
SFTPA1-204ENST00000429958 ADAMTS2O95450 1211 aa17.28■□□□□ 0.36
SFTPA1-204ENST00000429958 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
SFTPA1-204ENST00000429958 YTHDC2Q9H6S0 1430 aaKnown RBP17.28■□□□□ 0.36
SFTPA1-204ENST00000429958 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.36
SFTPA1-204ENST00000429958 HRCP23327 699 aa17.27■□□□□ 0.36
SFTPA1-204ENST00000429958 RBM6P78332 1123 aaKnown RBP17.27■□□□□ 0.36
SFTPA1-204ENST00000429958 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
SFTPA1-204ENST00000429958 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
SFTPA1-204ENST00000429958 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
SFTPA1-204ENST00000429958 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
SFTPA1-204ENST00000429958 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
SFTPA1-204ENST00000429958 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
SFTPA1-204ENST00000429958 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
SFTPA1-204ENST00000429958 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
SFTPA1-204ENST00000429958 PXDNQ92626 1479 aa17.23■□□□□ 0.35
SFTPA1-204ENST00000429958 USP21Q9UK80 565 aa17.22■□□□□ 0.35
SFTPA1-204ENST00000429958 MYOM2P54296 1465 aa17.21■□□□□ 0.35
SFTPA1-204ENST00000429958 KRT28Q7Z3Y7 464 aa17.2■□□□□ 0.34
SFTPA1-204ENST00000429958 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
SFTPA1-204ENST00000429958 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
SFTPA1-204ENST00000429958 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
SFTPA1-204ENST00000429958 TRPC5Q9UL62 973 aaPredicted RBP17.19■□□□□ 0.34
SFTPA1-204ENST00000429958 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
SFTPA1-204ENST00000429958 RGS12O14924 1447 aa17.17■□□□□ 0.34
SFTPA1-204ENST00000429958 COL22A1Q8NFW1 1626 aaPredicted RBP17.17■□□□□ 0.34
SFTPA1-204ENST00000429958 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
SFTPA1-204ENST00000429958 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
SFTPA1-204ENST00000429958 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
SFTPA1-204ENST00000429958 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
SFTPA1-204ENST00000429958 ATRNO75882 1429 aa17.15■□□□□ 0.34
SFTPA1-204ENST00000429958 POGKQ9P215 609 aa17.15■□□□□ 0.34
SFTPA1-204ENST00000429958 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
SFTPA1-204ENST00000429958 PSME1Q06323 249 aa17.14■□□□□ 0.33
SFTPA1-204ENST00000429958 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
SFTPA1-204ENST00000429958 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
SFTPA1-204ENST00000429958 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
SFTPA1-204ENST00000429958 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
SFTPA1-204ENST00000429958 GJD4Q96KN9 370 aaPredicted RBP17.11■□□□□ 0.33
SFTPA1-204ENST00000429958 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
SFTPA1-204ENST00000429958 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
SFTPA1-204ENST00000429958 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
SFTPA1-204ENST00000429958 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
SFTPA1-204ENST00000429958 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
SFTPA1-204ENST00000429958 ANKARQ7Z5J8 1434 aa17.08■□□□□ 0.32
SFTPA1-204ENST00000429958 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
SFTPA1-204ENST00000429958 SLIT2O94813 1529 aa17.07■□□□□ 0.32
SFTPA1-204ENST00000429958 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
SFTPA1-204ENST00000429958 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
SFTPA1-204ENST00000429958 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
SFTPA1-204ENST00000429958 KIF1AQ12756 1690 aa17.06■□□□□ 0.32
SFTPA1-204ENST00000429958 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
SFTPA1-204ENST00000429958 FAM83GA6ND36 823 aa17.04■□□□□ 0.32
SFTPA1-204ENST00000429958 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
SFTPA1-204ENST00000429958 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
SFTPA1-204ENST00000429958 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
SFTPA1-204ENST00000429958 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
SFTPA1-204ENST00000429958 VPS72Q15906 364 aa17.02■□□□□ 0.32
SFTPA1-204ENST00000429958 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
SFTPA1-204ENST00000429958 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
SFTPA1-204ENST00000429958 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
SFTPA1-204ENST00000429958 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
SFTPA1-204ENST00000429958 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
SFTPA1-204ENST00000429958 RGPD8O14715 1765 aaPredicted RBP17■□□□□ 0.31
SFTPA1-204ENST00000429958 PLEKHG5O94827 1062 aa17■□□□□ 0.31
SFTPA1-204ENST00000429958 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
SFTPA1-204ENST00000429958 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
SFTPA1-204ENST00000429958 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
SFTPA1-204ENST00000429958 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
SFTPA1-204ENST00000429958 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
SFTPA1-204ENST00000429958 MARF1Q9Y4F3 1742 aaKnown RBP16.99■□□□□ 0.31
SFTPA1-204ENST00000429958 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
SFTPA1-204ENST00000429958 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
SFTPA1-204ENST00000429958 GLI3P10071 1580 aa16.96■□□□□ 0.31
SFTPA1-204ENST00000429958 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.94■□□□□ 0.3
SFTPA1-204ENST00000429958 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
SFTPA1-204ENST00000429958 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
SFTPA1-204ENST00000429958 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
SFTPA1-204ENST00000429958 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
SFTPA1-204ENST00000429958 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
SFTPA1-204ENST00000429958 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
SFTPA1-204ENST00000429958 TRPM3Q9HCF6 1732 aaPredicted RBP16.92■□□□□ 0.3
SFTPA1-204ENST00000429958 ATP7BP35670 1465 aa16.92■□□□□ 0.3
SFTPA1-204ENST00000429958 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
SFTPA1-204ENST00000429958 ACEP12821 1306 aa16.91■□□□□ 0.3
SFTPA1-204ENST00000429958 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
SFTPA1-204ENST00000429958 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms