RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZMYM3Q14202 1370 aa13.92□□□□□ -0.18
SEMA4D-209ENST00000429836 GBP4Q96PP9 640 aa13.92□□□□□ -0.18
SEMA4D-209ENST00000429836 MSNP26038 577 aaKnown RBP13.92□□□□□ -0.18
SEMA4D-209ENST00000429836 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
SEMA4D-209ENST00000429836 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
SEMA4D-209ENST00000429836 PLXNC1O60486 1568 aa13.9□□□□□ -0.18
SEMA4D-209ENST00000429836 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
SEMA4D-209ENST00000429836 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
SEMA4D-209ENST00000429836 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 EIF2AK4Q9P2K8 1649 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 CD2BP2O95400 341 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 SKOR2Q2VWA4 1001 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 SSFA2P28290 1259 aa13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-209ENST00000429836 SYNMO15061 1565 aa13.88□□□□□ -0.19
SEMA4D-209ENST00000429836 PLEKHD1A6NEE1 506 aa13.88□□□□□ -0.19
SEMA4D-209ENST00000429836 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
SEMA4D-209ENST00000429836 ANP32BQ92688 251 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-209ENST00000429836 AAMPQ13685 434 aa13.87□□□□□ -0.19
SEMA4D-209ENST00000429836 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
SEMA4D-209ENST00000429836 PRDM10Q9NQV6 1147 aa13.87□□□□□ -0.19
SEMA4D-209ENST00000429836 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
SEMA4D-209ENST00000429836 CDCA8Q53HL2 280 aa13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 UQCRHP07919 91 aa13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 SNX21Q969T3 373 aa13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-209ENST00000429836 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 ERCC6L2Q5T890 1561 aa13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 RNF17Q9BXT8 1623 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 MYOM1P52179 1685 aa13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
SEMA4D-209ENST00000429836 NPC1L1Q9UHC9 1359 aa13.84□□□□□ -0.19
SEMA4D-209ENST00000429836 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
SEMA4D-209ENST00000429836 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 KIF2CQ99661 725 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
SEMA4D-209ENST00000429836 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
SEMA4D-209ENST00000429836 ZBTB7CA1YPR0 619 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 TERF1P54274 439 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 IQGAP1P46940 1657 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 BAG4O95429 457 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 KLHL40Q2TBA0 621 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 RBSNQ9H1K0 784 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 GOLGA6L22H0YM25 854 aa13.81□□□□□ -0.2
SEMA4D-209ENST00000429836 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 PTMSP20962 102 aa13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 TRIM27P14373 513 aa13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
SEMA4D-209ENST00000429836 SCAF11Q99590 1463 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-209ENST00000429836 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
SEMA4D-209ENST00000429836 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 ZNF500O60304 480 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
SEMA4D-209ENST00000429836 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.2
SEMA4D-209ENST00000429836 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-209ENST00000429836 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
SEMA4D-209ENST00000429836 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.21
SEMA4D-209ENST00000429836 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-209ENST00000429836 ZNF445P59923 1031 aa13.77□□□□□ -0.21
SEMA4D-209ENST00000429836 UNC13BO14795 1591 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 ATP10BO94823 1461 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 SSH1Q8WYL5 1049 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 KDM5AP29375 1690 aaKnown RBP13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-209ENST00000429836 CEP152O94986 1710 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 NUCB1Q02818 461 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 PKP1Q13835 747 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
SEMA4D-209ENST00000429836 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms