RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CCDC91Q7Z6B0 441 aa9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 TTLL5Q6EMB2 1281 aa9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 NAP1L2Q9ULW6 460 aaPredicted RBP9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 LIG1P18858 919 aa9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 OFD1O75665 1012 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 POGKQ9P215 609 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 CFTRP13569 1480 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 PLEKHH1Q9ULM0 1364 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 DRC7Q8IY82 874 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 PANK3Q9H999 370 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 REC8O95072 547 aa9.1□□□□□ -0.95
SYNPO2-202ENST00000429713 POLA1P09884 1462 aaPredicted RBP9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 HFM1A2PYH4 1435 aa9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 CWC22Q9HCG8 908 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 UQCRHLA0A096LP55 91 aa9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 GOLGA6L10A6NI86 522 aa9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 UQCRHP07919 91 aa9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 DDX49Q9Y6V7 483 aaKnown RBP9.09□□□□□ -0.95
SYNPO2-202ENST00000429713 CT47B1P0C2W7 299 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 SRPK2P78362 688 aaKnown RBP9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 NESP48681 1621 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 IGF1RP08069 1367 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 E9PSI1 815 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 ERLIN1O75477 346 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 U2AF1L5P0DN76 240 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 U2AF1Q01081 240 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 LUZP1Q86V48 1076 aa9.08□□□□□ -0.96
SYNPO2-202ENST00000429713 GOLGA6L7A0A1B0GV03 622 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 KIF1CO43896 1103 aaKnown RBP9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 TRAK2O60296 914 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 KRT222Q8N1A0 295 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 GCC2Q8IWJ2 1684 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 MCM3P25205 808 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 KIAA1328Q86T90 577 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 MSH5O43196 834 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 KCNJ4P48050 445 aa9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 HNRNPMP52272 730 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYNPO2-202ENST00000429713 POTEB2H3BUK9 544 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 MYCBPQ99417 103 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 PLCD4Q9BRC7 762 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 PSMD1Q99460 953 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 RPAINQ86UA6 219 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 RAD54L2Q9Y4B4 1467 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 AEBP1Q8IUX7 1158 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 HDAC5Q9UQL6 1122 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 DNMBPQ6XZF7 1577 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 OS9Q13438 667 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 TEX2Q8IWB9 1127 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 EFCC1Q9HA90 598 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 CLUAP1Q96AJ1 413 aa9.06□□□□□ -0.96
SYNPO2-202ENST00000429713 NAT10Q9H0A0 1025 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 GBP3Q9H0R5 595 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 RSPH4AQ5TD94 716 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 SLC26A8Q96RN1 970 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 JAKMIP3Q5VZ66 844 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 MCM4P33991 863 aa9.05□□□□□ -0.96
SYNPO2-202ENST00000429713 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
SYNPO2-202ENST00000429713 SLC20A2Q08357 652 aa9.04□□□□□ -0.96
SYNPO2-202ENST00000429713 TRDNQ13061 729 aa9.04□□□□□ -0.96
SYNPO2-202ENST00000429713 DMTNQ08495 405 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 STK11IPQ8N1F8 1099 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 HSP90AB3PQ58FF7 597 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 GBP2P32456 591 aaPredicted RBP9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 APBB1O00213 710 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 IQCEQ6IPM2 695 aa9.03□□□□□ -0.96
SYNPO2-202ENST00000429713 UVSSAQ2YD98 709 aa9.02□□□□□ -0.96
SYNPO2-202ENST00000429713 IQGAP2Q13576 1575 aa9.02□□□□□ -0.96
SYNPO2-202ENST00000429713 SAFB2Q14151 953 aaKnown RBP eCLIP9.02□□□□□ -0.96
SYNPO2-202ENST00000429713 KIAA0754O94854 1291 aa9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 PDCP20941 246 aa9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 GIMAP7Q8NHV1 300 aa9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 YY1AP1Q9H869 796 aa9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-202ENST00000429713 BMS1Q14692 1282 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 ZRSR2Q15696 482 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 KIF14Q15058 1648 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
SYNPO2-202ENST00000429713 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms