RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
NEDD1-203ENST00000429527 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
NEDD1-203ENST00000429527 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
NEDD1-203ENST00000429527 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
NEDD1-203ENST00000429527 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
NEDD1-203ENST00000429527 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.25
NEDD1-203ENST00000429527 ITSN1Q15811 1721 aa13.52□□□□□ -0.25
NEDD1-203ENST00000429527 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
NEDD1-203ENST00000429527 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
NEDD1-203ENST00000429527 ANKARQ7Z5J8 1434 aa13.51□□□□□ -0.25
NEDD1-203ENST00000429527 HSPA1LP34931 641 aa13.51□□□□□ -0.25
NEDD1-203ENST00000429527 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
NEDD1-203ENST00000429527 FOXD1Q16676 465 aa13.49□□□□□ -0.25
NEDD1-203ENST00000429527 TRPM3Q9HCF6 1732 aaPredicted RBP13.48□□□□□ -0.25
NEDD1-203ENST00000429527 CRYBG1Q9Y4K1 1723 aa13.48□□□□□ -0.25
NEDD1-203ENST00000429527 PXDNQ92626 1479 aa13.48□□□□□ -0.25
NEDD1-203ENST00000429527 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
NEDD1-203ENST00000429527 JCADQ9P266 1359 aa13.47□□□□□ -0.25
NEDD1-203ENST00000429527 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
NEDD1-203ENST00000429527 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
NEDD1-203ENST00000429527 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
NEDD1-203ENST00000429527 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
NEDD1-203ENST00000429527 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
NEDD1-203ENST00000429527 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-203ENST00000429527 GPRASP1Q5JY77 1395 aa13.43□□□□□ -0.26
NEDD1-203ENST00000429527 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-203ENST00000429527 BRINP3Q76B58 766 aa13.43□□□□□ -0.26
NEDD1-203ENST00000429527 USP54Q70EL1 1684 aa13.42□□□□□ -0.26
NEDD1-203ENST00000429527 ATF3P18847 181 aa13.42□□□□□ -0.26
NEDD1-203ENST00000429527 BCANQ96GW7 911 aa13.42□□□□□ -0.26
NEDD1-203ENST00000429527 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-203ENST00000429527 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
NEDD1-203ENST00000429527 LRP6O75581 1613 aa13.41□□□□□ -0.26
NEDD1-203ENST00000429527 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
NEDD1-203ENST00000429527 PLEKHH1Q9ULM0 1364 aa13.39□□□□□ -0.27
NEDD1-203ENST00000429527 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
NEDD1-203ENST00000429527 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
NEDD1-203ENST00000429527 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
NEDD1-203ENST00000429527 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
NEDD1-203ENST00000429527 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
NEDD1-203ENST00000429527 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
NEDD1-203ENST00000429527 ATP7BP35670 1465 aa13.36□□□□□ -0.27
NEDD1-203ENST00000429527 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
NEDD1-203ENST00000429527 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
NEDD1-203ENST00000429527 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
NEDD1-203ENST00000429527 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
NEDD1-203ENST00000429527 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
NEDD1-203ENST00000429527 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
NEDD1-203ENST00000429527 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
NEDD1-203ENST00000429527 NRAPQ86VF7 1730 aa13.33□□□□□ -0.28
NEDD1-203ENST00000429527 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
NEDD1-203ENST00000429527 PHRF1Q9P1Y6 1649 aaKnown RBP13.32□□□□□ -0.28
NEDD1-203ENST00000429527 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
NEDD1-203ENST00000429527 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
NEDD1-203ENST00000429527 ERICH6BQ5W0A0 696 aa13.31□□□□□ -0.28
NEDD1-203ENST00000429527 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
NEDD1-203ENST00000429527 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
NEDD1-203ENST00000429527 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
NEDD1-203ENST00000429527 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
NEDD1-203ENST00000429527 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
NEDD1-203ENST00000429527 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
NEDD1-203ENST00000429527 RGS17Q9UGC6 210 aaPredicted RBP13.29□□□□□ -0.28
NEDD1-203ENST00000429527 COL14A1Q05707 1796 aaKnown RBP13.28□□□□□ -0.28
NEDD1-203ENST00000429527 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
NEDD1-203ENST00000429527 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
NEDD1-203ENST00000429527 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
NEDD1-203ENST00000429527 ABCC6O95255 1503 aa13.28□□□□□ -0.28
NEDD1-203ENST00000429527 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
NEDD1-203ENST00000429527 PUS7Q96PZ0 661 aaKnown RBP13.26□□□□□ -0.29
NEDD1-203ENST00000429527 SPATA31A3Q5VYP0 1347 aa13.25□□□□□ -0.29
NEDD1-203ENST00000429527 SLIT2O94813 1529 aa13.25□□□□□ -0.29
NEDD1-203ENST00000429527 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
NEDD1-203ENST00000429527 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
NEDD1-203ENST00000429527 ATRNO75882 1429 aa13.25□□□□□ -0.29
NEDD1-203ENST00000429527 SLIT3O75094 1523 aa13.25□□□□□ -0.29
NEDD1-203ENST00000429527 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
NEDD1-203ENST00000429527 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
NEDD1-203ENST00000429527 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
NEDD1-203ENST00000429527 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
NEDD1-203ENST00000429527 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 SOCS7O14512 581 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
NEDD1-203ENST00000429527 FNBP4Q8N3X1 1017 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-203ENST00000429527 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.3
NEDD1-203ENST00000429527 STK26Q9P289 416 aa13.21□□□□□ -0.3
NEDD1-203ENST00000429527 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.3
NEDD1-203ENST00000429527 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
NEDD1-203ENST00000429527 PSME1Q06323 249 aa13.2□□□□□ -0.3
NEDD1-203ENST00000429527 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
NEDD1-203ENST00000429527 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
NEDD1-203ENST00000429527 ANP32EQ9BTT0 268 aa13.19□□□□□ -0.3
NEDD1-203ENST00000429527 COL18A1P39060 1754 aa13.19□□□□□ -0.3
NEDD1-203ENST00000429527 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
NEDD1-203ENST00000429527 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
NEDD1-203ENST00000429527 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
NEDD1-203ENST00000429527 POGKQ9P215 609 aa13.18□□□□□ -0.3
NEDD1-203ENST00000429527 GLI3P10071 1580 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms