RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 RAD21O60216 631 aa15.45■□□□□ 0.06
LDB3-205ENST00000429277 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
LDB3-205ENST00000429277 VPS37CA5D8V6 355 aaPredicted RBP15.44■□□□□ 0.06
LDB3-205ENST00000429277 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
LDB3-205ENST00000429277 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
LDB3-205ENST00000429277 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
LDB3-205ENST00000429277 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
LDB3-205ENST00000429277 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
LDB3-205ENST00000429277 GPRASP1Q5JY77 1395 aa15.43■□□□□ 0.06
LDB3-205ENST00000429277 MCM2P49736 904 aa15.43■□□□□ 0.06
LDB3-205ENST00000429277 SART3Q15020 963 aaKnown RBP15.43■□□□□ 0.06
LDB3-205ENST00000429277 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
LDB3-205ENST00000429277 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
LDB3-205ENST00000429277 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
LDB3-205ENST00000429277 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
LDB3-205ENST00000429277 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
LDB3-205ENST00000429277 C22orf23Q9BZE7 217 aa15.42■□□□□ 0.06
LDB3-205ENST00000429277 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
LDB3-205ENST00000429277 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
LDB3-205ENST00000429277 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
LDB3-205ENST00000429277 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
LDB3-205ENST00000429277 CLASRPQ8N2M8 674 aaKnown RBP15.42■□□□□ 0.06
LDB3-205ENST00000429277 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
LDB3-205ENST00000429277 IGF1RP08069 1367 aa15.41■□□□□ 0.06
LDB3-205ENST00000429277 OLFM4Q6UX06 510 aa15.41■□□□□ 0.06
LDB3-205ENST00000429277 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
LDB3-205ENST00000429277 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 PDCP20941 246 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
LDB3-205ENST00000429277 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 ZNF592Q92610 1267 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 AK7Q96M32 723 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
LDB3-205ENST00000429277 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
LDB3-205ENST00000429277 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
LDB3-205ENST00000429277 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
LDB3-205ENST00000429277 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
LDB3-205ENST00000429277 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
LDB3-205ENST00000429277 RDXP35241 583 aaKnown RBP15.39■□□□□ 0.05
LDB3-205ENST00000429277 RUFY1Q96T51 708 aa15.39■□□□□ 0.05
LDB3-205ENST00000429277 SMG6Q86US8 1419 aaKnown RBP15.39■□□□□ 0.05
LDB3-205ENST00000429277 CCDC173Q0VFZ6 552 aa15.39■□□□□ 0.05
LDB3-205ENST00000429277 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
LDB3-205ENST00000429277 LNPKQ9C0E8 428 aa15.38■□□□□ 0.05
LDB3-205ENST00000429277 SLC3A2P08195 630 aaKnown RBP15.38■□□□□ 0.05
LDB3-205ENST00000429277 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
LDB3-205ENST00000429277 MBD3O95983 291 aa15.38■□□□□ 0.05
LDB3-205ENST00000429277 NLRP6P59044 892 aa15.38■□□□□ 0.05
LDB3-205ENST00000429277 CT47A1Q5JQC4 288 aaPredicted RBP15.38■□□□□ 0.05
LDB3-205ENST00000429277 PIP4K2AP48426 406 aaPredicted RBP15.37■□□□□ 0.05
LDB3-205ENST00000429277 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
LDB3-205ENST00000429277 SLC4A3P48751 1232 aa15.37■□□□□ 0.05
LDB3-205ENST00000429277 MNS1Q8NEH6 495 aa15.37■□□□□ 0.05
LDB3-205ENST00000429277 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
LDB3-205ENST00000429277 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
LDB3-205ENST00000429277 ODF2Q5BJF6 829 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 AEBP2Q6ZN18 517 aaPredicted RBP15.36■□□□□ 0.05
LDB3-205ENST00000429277 PLEKHH2Q8IVE3 1493 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 HMOX1P09601 288 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 GCC1Q96CN9 775 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 GGNBP2Q9H3C7 697 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
LDB3-205ENST00000429277 OFD1O75665 1012 aa15.35■□□□□ 0.05
LDB3-205ENST00000429277 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
LDB3-205ENST00000429277 CCP110O43303 1012 aa15.35■□□□□ 0.05
LDB3-205ENST00000429277 EPS15P42566 896 aa15.35■□□□□ 0.05
LDB3-205ENST00000429277 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
LDB3-205ENST00000429277 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
LDB3-205ENST00000429277 SDF4Q9BRK5 362 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
LDB3-205ENST00000429277 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 HSP90B2PQ58FF3 399 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 TXLNAP40222 546 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 MRE11P49959 708 aa15.34■□□□□ 0.05
LDB3-205ENST00000429277 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
LDB3-205ENST00000429277 PDE3AQ14432 1141 aa15.33■□□□□ 0.05
LDB3-205ENST00000429277 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.05
LDB3-205ENST00000429277 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
LDB3-205ENST00000429277 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
LDB3-205ENST00000429277 AIMP1Q12904 312 aaKnown RBP15.33■□□□□ 0.04
LDB3-205ENST00000429277 RABEP1Q15276 862 aa15.33■□□□□ 0.04
LDB3-205ENST00000429277 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
LDB3-205ENST00000429277 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
LDB3-205ENST00000429277 ARHGAP5Q13017 1502 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 MTERF4Q7Z6M4 381 aaKnown RBP15.32■□□□□ 0.04
LDB3-205ENST00000429277 MTHFSP49914 203 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 ZNF771Q7L3S4 317 aaPredicted RBP15.32■□□□□ 0.04
LDB3-205ENST00000429277 ZNF396Q96N95 335 aaPredicted RBP15.32■□□□□ 0.04
LDB3-205ENST00000429277 IFT57Q9NWB7 429 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 NCOA2Q15596 1464 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
LDB3-205ENST00000429277 SURF6O75683 361 aaKnown RBP15.31■□□□□ 0.04
LDB3-205ENST00000429277 FILIP1LQ4L180 1135 aa15.31■□□□□ 0.04
LDB3-205ENST00000429277 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
LDB3-205ENST00000429277 KIF21BO75037 1637 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms